BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116n17 (1403 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 307 7e-80 emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 307 7e-80 emb|CT835408.1| Oryza sativa (indica cultivar-group) cDNA clone:... 107 1e-19 dbj|AK243467.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 107 1e-19 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 107 1e-19 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 307 bits (155), Expect = 7e-80 Identities = 319/375 (85%), Gaps = 9/375 (2%) Strand = Plus / Plus Query: 612 ggggccgacgacggtggcctcgcagctattcttggctcgatccggcccggcatcctgtcc 671 |||| ||||||||| |||||||| || || || |||||||||||||| |||||||| ||| Sbjct: 20634112 ggggtcgacgacggcggcctcgcggcgatcctcggctcgatccggccaggcatcctctcc 20634171 Query: 672 ccgctgccttcgtcgctgccgccggccgcggcctccgggctgttctcgccgatcccgttc 731 ||||| || || || || ||||| ||||| | | |||| | |||||||||| |||||||| Sbjct: 20634172 ccgctcccctcctccctcccgcccgccgccgtccccggccagttctcgccgctcccgttc 20634231 Query: 732 gacccgaactccatcagctggctgaacgagctgagccccattttccgagccgcctccacc 791 ||| ||| || |||||||||||| ||||||||||||||||| |||| ||||||||| || Sbjct: 20634232 gacgcgagctgcatcagctggctcaacgagctgagccccatcctccgggccgcctccgcc 20634291 Query: 792 ggcgccgcctcgtccggcagcggcagcggcggcgg---------cacgagcaacggcggc 842 |||||||||||||||||||||||| |||||||| | ||| |||||||||||| Sbjct: 20634292 ggcgccgcctcgtccggcagcggcggcggcggcagcggtggcaacaccagcaacggcggc 20634351 Query: 843 gcctcccgggacccgccatcctactactccgaccccttcgtccccagcccccgcaacctc 902 ||| |||| ||||| ||||||||| ||||||| |||||||||||||| || ||||| Sbjct: 20634352 gccgcccgcccgccgccgtcctactacgccgacccattcgtccccagcccacgtcacctc 20634411 Query: 903 ctcgccacgcccaccgtgccgtcgccggagacctgcgcggagctcttcagcaacctaccg 962 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| Sbjct: 20634412 ctcgccacgcccaccgtgccgtcgccggcgacctgcgccgagctcttcagcaacctgccg 20634471 Query: 963 gatctttagctcgcc 977 ||||| |||| |||| Sbjct: 20634472 gatctctagcccgcc 20634486 Score = 188 bits (95), Expect = 4e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 489 ccgccggagctgctgctctcgccgtcggccgcgatgtccccggcggcgaagctggcgacc 548 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20633977 ccgccggagctgctgctctcgccgtcggccgcgatgtccccggcggcgaggctggcgacc 20634036 Query: 549 atcgagaggtccgtccggccgatgcccgcgacggcgccggagtacgtggac 599 ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 20634037 atcgagaggtccgtccgcccgatgcccgagccggcgccggagtacgtggac 20634087 Score = 172 bits (87), Expect = 2e-39 Identities = 105/111 (94%) Strand = Plus / Plus Query: 296 gccgccgccgcgggcgccggtgatcatctacgacgcgtcgccgaagatcatccacaccaa 355 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 20633784 gccgccgccgcgggcgccggtgatcatctacgacgcgtcgccgaagattatccacgccaa 20633843 Query: 356 gcccagcgagttcatggcgctggtgcagcagctcaccggcccgggctcggg 406 ||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct: 20633844 gcccaacgagttcatggcgctcgtgcagcggctcaccggcccggggtcggg 20633894 Score = 157 bits (79), Expect = 1e-34 Identities = 88/91 (96%) Strand = Plus / Plus Query: 140 gcagccgacgacgccgcggcggcagctgcagggcccgcgcccaccgcggctcaacgtgcg 199 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 20633613 gcagccgacgacgccgcggcggcagcttcagggcccgcgccccccgcggctcaacgtgcg 20633672 Query: 200 gatggaatcgcacgccatcaagaagccgtcg 230 |||||| |||||||||||||||||||||||| Sbjct: 20633673 gatggagtcgcacgccatcaagaagccgtcg 20633703 >emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 307 bits (155), Expect = 7e-80 Identities = 319/375 (85%), Gaps = 9/375 (2%) Strand = Plus / Plus Query: 612 ggggccgacgacggtggcctcgcagctattcttggctcgatccggcccggcatcctgtcc 671 |||| ||||||||| |||||||| || || || |||||||||||||| |||||||| ||| Sbjct: 68546 ggggtcgacgacggcggcctcgcggcgatcctcggctcgatccggccaggcatcctctcc 68605 Query: 672 ccgctgccttcgtcgctgccgccggccgcggcctccgggctgttctcgccgatcccgttc 731 ||||| || || || || ||||| ||||| | | |||| | |||||||||| |||||||| Sbjct: 68606 ccgctcccctcctccctcccgcccgccgccgtccccggccagttctcgccgctcccgttc 68665 Query: 732 gacccgaactccatcagctggctgaacgagctgagccccattttccgagccgcctccacc 791 ||| ||| || |||||||||||| ||||||||||||||||| |||| ||||||||| || Sbjct: 68666 gacgcgagctgcatcagctggctcaacgagctgagccccatcctccgggccgcctccgcc 68725 Query: 792 ggcgccgcctcgtccggcagcggcagcggcggcgg---------cacgagcaacggcggc 842 |||||||||||||||||||||||| |||||||| | ||| |||||||||||| Sbjct: 68726 ggcgccgcctcgtccggcagcggcggcggcggcagcggtggcaacaccagcaacggcggc 68785 Query: 843 gcctcccgggacccgccatcctactactccgaccccttcgtccccagcccccgcaacctc 902 ||| |||| ||||| ||||||||| ||||||| |||||||||||||| || ||||| Sbjct: 68786 gccgcccgcccgccgccgtcctactacgccgacccattcgtccccagcccacgtcacctc 68845 Query: 903 ctcgccacgcccaccgtgccgtcgccggagacctgcgcggagctcttcagcaacctaccg 962 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| Sbjct: 68846 ctcgccacgcccaccgtgccgtcgccggcgacctgcgccgagctcttcagcaacctgccg 68905 Query: 963 gatctttagctcgcc 977 ||||| |||| |||| Sbjct: 68906 gatctctagcccgcc 68920 Score = 188 bits (95), Expect = 4e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 489 ccgccggagctgctgctctcgccgtcggccgcgatgtccccggcggcgaagctggcgacc 548 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68411 ccgccggagctgctgctctcgccgtcggccgcgatgtccccggcggcgaggctggcgacc 68470 Query: 549 atcgagaggtccgtccggccgatgcccgcgacggcgccggagtacgtggac 599 ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 68471 atcgagaggtccgtccgcccgatgcccgagccggcgccggagtacgtggac 68521 Score = 172 bits (87), Expect = 2e-39 Identities = 105/111 (94%) Strand = Plus / Plus Query: 296 gccgccgccgcgggcgccggtgatcatctacgacgcgtcgccgaagatcatccacaccaa 355 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 68218 gccgccgccgcgggcgccggtgatcatctacgacgcgtcgccgaagattatccacgccaa 68277 Query: 356 gcccagcgagttcatggcgctggtgcagcagctcaccggcccgggctcggg 406 ||||| ||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct: 68278 gcccaacgagttcatggcgctcgtgcagcggctcaccggcccggggtcggg 68328 Score = 157 bits (79), Expect = 1e-34 Identities = 88/91 (96%) Strand = Plus / Plus Query: 140 gcagccgacgacgccgcggcggcagctgcagggcccgcgcccaccgcggctcaacgtgcg 199 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 68047 gcagccgacgacgccgcggcggcagcttcagggcccgcgccccccgcggctcaacgtgcg 68106 Query: 200 gatggaatcgcacgccatcaagaagccgtcg 230 |||||| |||||||||||||||||||||||| Sbjct: 68107 gatggagtcgcacgccatcaagaagccgtcg 68137 >emb|CT835408.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124H24, full insert sequence Length = 1484 Score = 107 bits (54), Expect = 1e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 302 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagatcatccacaccaagcccag 361 ||||||||||||||| |||||||||||||| ||||||||| | || ||||||| |||||| Sbjct: 338 gccgcgggcgccggtcatcatctacgacgcctcgccgaaggttattcacaccaggcccag 397 Query: 362 cgagttcatggcgctggtgcagcagctcaccggcccgggctc 403 ||||||||||||||| || |||| ||||| ||||| ||||| Sbjct: 398 cgagttcatggcgctcgtccagcgcctcactggccctggctc 439 >dbj|AK243467.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100071K17, full insert sequence Length = 1501 Score = 107 bits (54), Expect = 1e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 302 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagatcatccacaccaagcccag 361 ||||||||||||||| |||||||||||||| ||||||||| | || ||||||| |||||| Sbjct: 373 gccgcgggcgccggtcatcatctacgacgcctcgccgaaggttattcacaccaggcccag 432 Query: 362 cgagttcatggcgctggtgcagcagctcaccggcccgggctc 403 ||||||||||||||| || |||| ||||| ||||| ||||| Sbjct: 433 cgagttcatggcgctcgtccagcgcctcactggccctggctc 474 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 107 bits (54), Expect = 1e-19 Identities = 90/102 (88%) Strand = Plus / Plus Query: 302 gccgcgggcgccggtgatcatctacgacgcgtcgccgaagatcatccacaccaagcccag 361 ||||||||||||||| |||||||||||||| ||||||||| | || ||||||| |||||| Sbjct: 20020564 gccgcgggcgccggtcatcatctacgacgcctcgccgaaggttattcacaccaggcccag 20020623 Query: 362 cgagttcatggcgctggtgcagcagctcaccggcccgggctc 403 ||||||||||||||| || |||| ||||| ||||| ||||| Sbjct: 20020624 cgagttcatggcgctcgtccagcgcctcactggccctggctc 20020665