BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116n03 (1049 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056658.1| Oryza sativa (japonica cultivar-group) Os03g... 157 1e-34 gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare str... 157 1e-34 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-34 dbj|AK119231.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 1e-34 dbj|AK105418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 1e-34 >ref|NM_001056658.1| Oryza sativa (japonica cultivar-group) Os03g0352400 (Os03g0352400) mRNA, complete cds Length = 2054 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Plus Query: 414 gcaagctagggcacatcttcttgacactgagccttctgagcatgcctttggaccaaaggg 473 |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 488 gcaagctagggcgcatcttcttgacactgaaccttttgagcatgcatttggaccaaaggg 547 Query: 474 caagaggaaacgcccaaaactattggcatttgattacaaatctctgttgaacaaagctaa 533 |||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| | Sbjct: 548 caagaggaaacgcccaaaactaatggctcttgattacgaatctctattgaagaaagctga 607 Query: 534 tggctctcaag 544 || ||||||| Sbjct: 608 tgattctcaag 618 Score = 139 bits (70), Expect = 3e-29 Identities = 79/82 (96%) Strand = Plus / Plus Query: 559 acaatgtttgagaagggacagagcaaaagaatttggggtgaactttataaagttattgac 618 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 699 acaatgttcgagaagggacagagcaaaagaatttggggtgaactctataaagttattgac 758 Query: 619 tcttcagatgttgttgtgcagg 640 |||||||||||||| ||||||| Sbjct: 759 tcttcagatgttgtcgtgcagg 780 Score = 121 bits (61), Expect = 6e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 665 gtgttggatgccagggatccaatgggcacaagatgctaccatctagagaagcatctgaaa 724 |||||||||||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct: 780 gtgttggatgccagggatccaatgggtactagatgctaccatctggagaaacatctg-aa 838 Query: 725 ggagaacgccaaacacagacactcggtattcttactaaata 765 |||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 839 ggagaatgccaagcacaaacacttggtattcttactaaata 879 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 351 aagcacggcctccagtccaaggagctccccaacacccgcatcgagcctgactgccgctgg 410 ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 291 aagcacgacctccagtccaaggagctccccaacacccgcatcgagcccgatcgccgctgg 350 Query: 411 ttcg 414 |||| Sbjct: 351 ttcg 354 >gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Minus Query: 414 gcaagctagggcacatcttcttgacactgagccttctgagcatgcctttggaccaaaggg 473 |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 23609 gcaagctagggcgcatcttcttgacactgaaccttttgagcatgcatttggaccaaaggg 23550 Query: 474 caagaggaaacgcccaaaactattggcatttgattacaaatctctgttgaacaaagctaa 533 |||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| | Sbjct: 23549 caagaggaaacgcccaaaactaatggctcttgattacgaatctctattgaagaaagctga 23490 Query: 534 tggctctcaag 544 || ||||||| Sbjct: 23489 tgattctcaag 23479 Score = 141 bits (71), Expect = 6e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 559 acaatgtttgagaagggacagagcaaaagaatttggggtgaactttataaagttattgac 618 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 23043 acaatgttcgagaagggacagagcaaaagaatttggggtgaactctataaagttattgac 22984 Query: 619 tcttcagatgttgttgtgcaggccagtgttg 649 |||||||||||||| ||||||| ||||||| Sbjct: 22983 tcttcagatgttgtcgtgcaggtaagtgttg 22953 Score = 121 bits (61), Expect = 6e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 665 gtgttggatgccagggatccaatgggcacaagatgctaccatctagagaagcatctgaaa 724 |||||||||||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct: 22826 gtgttggatgccagggatccaatgggtactagatgctaccatctggagaaacatctg-aa 22768 Query: 725 ggagaacgccaaacacagacactcggtattcttactaaata 765 |||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 22767 ggagaatgccaagcacaaacacttggtattcttactaaata 22727 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 351 aagcacggcctccagtccaaggagctccccaacacccgcatcgagcctgactgccgctgg 410 ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 24577 aagcacgacctccagtccaaggagctccccaacacccgcatcgagcccgatcgccgctgg 24518 Query: 411 ttcg 414 |||| Sbjct: 24517 ttcg 24514 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Plus Query: 414 gcaagctagggcacatcttcttgacactgagccttctgagcatgcctttggaccaaaggg 473 |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 13199804 gcaagctagggcgcatcttcttgacactgaaccttttgagcatgcatttggaccaaaggg 13199863 Query: 474 caagaggaaacgcccaaaactattggcatttgattacaaatctctgttgaacaaagctaa 533 |||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| | Sbjct: 13199864 caagaggaaacgcccaaaactaatggctcttgattacgaatctctattgaagaaagctga 13199923 Query: 534 tggctctcaag 544 || ||||||| Sbjct: 13199924 tgattctcaag 13199934 Score = 141 bits (71), Expect = 6e-30 Identities = 86/91 (94%) Strand = Plus / Plus Query: 559 acaatgtttgagaagggacagagcaaaagaatttggggtgaactttataaagttattgac 618 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 13200370 acaatgttcgagaagggacagagcaaaagaatttggggtgaactctataaagttattgac 13200429 Query: 619 tcttcagatgttgttgtgcaggccagtgttg 649 |||||||||||||| ||||||| ||||||| Sbjct: 13200430 tcttcagatgttgtcgtgcaggtaagtgttg 13200460 Score = 121 bits (61), Expect = 6e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 665 gtgttggatgccagggatccaatgggcacaagatgctaccatctagagaagcatctgaaa 724 |||||||||||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct: 13200587 gtgttggatgccagggatccaatgggtactagatgctaccatctggagaaacatctg-aa 13200645 Query: 725 ggagaacgccaaacacagacactcggtattcttactaaata 765 |||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 13200646 ggagaatgccaagcacaaacacttggtattcttactaaata 13200686 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 351 aagcacggcctccagtccaaggagctccccaacacccgcatcgagcctgactgccgctgg 410 ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 13198836 aagcacgacctccagtccaaggagctccccaacacccgcatcgagcccgatcgccgctgg 13198895 Query: 411 ttcg 414 |||| Sbjct: 13198896 ttcg 13198899 >dbj|AK119231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E03, full insert sequence Length = 2028 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Plus Query: 414 gcaagctagggcacatcttcttgacactgagccttctgagcatgcctttggaccaaaggg 473 |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 488 gcaagctagggcgcatcttcttgacactgaaccttttgagcatgcatttggaccaaaggg 547 Query: 474 caagaggaaacgcccaaaactattggcatttgattacaaatctctgttgaacaaagctaa 533 |||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| | Sbjct: 548 caagaggaaacgcccaaaactaatggctcttgattacgaatctctattgaagaaagctga 607 Query: 534 tggctctcaag 544 || ||||||| Sbjct: 608 tgattctcaag 618 Score = 139 bits (70), Expect = 3e-29 Identities = 79/82 (96%) Strand = Plus / Plus Query: 559 acaatgtttgagaagggacagagcaaaagaatttggggtgaactttataaagttattgac 618 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 699 acaatgttcgagaagggacagagcaaaagaatttggggtgaactctataaagttattgac 758 Query: 619 tcttcagatgttgttgtgcagg 640 |||||||||||||| ||||||| Sbjct: 759 tcttcagatgttgtcgtgcagg 780 Score = 121 bits (61), Expect = 6e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 665 gtgttggatgccagggatccaatgggcacaagatgctaccatctagagaagcatctgaaa 724 |||||||||||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct: 780 gtgttggatgccagggatccaatgggtactagatgctaccatctggagaaacatctg-aa 838 Query: 725 ggagaacgccaaacacagacactcggtattcttactaaata 765 |||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 839 ggagaatgccaagcacaaacacttggtattcttactaaata 879 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 351 aagcacggcctccagtccaaggagctccccaacacccgcatcgagcctgactgccgctgg 410 ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 291 aagcacgacctccagtccaaggagctccccaacacccgcatcgagcccgatcgccgctgg 350 Query: 411 ttcg 414 |||| Sbjct: 351 ttcg 354 >dbj|AK105418.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A10, full insert sequence Length = 2054 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Plus Query: 414 gcaagctagggcacatcttcttgacactgagccttctgagcatgcctttggaccaaaggg 473 |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||| Sbjct: 488 gcaagctagggcgcatcttcttgacactgaaccttttgagcatgcatttggaccaaaggg 547 Query: 474 caagaggaaacgcccaaaactattggcatttgattacaaatctctgttgaacaaagctaa 533 |||||||||||||||||||||| |||| |||||||| ||||||| ||||| |||||| | Sbjct: 548 caagaggaaacgcccaaaactaatggctcttgattacgaatctctattgaagaaagctga 607 Query: 534 tggctctcaag 544 || ||||||| Sbjct: 608 tgattctcaag 618 Score = 139 bits (70), Expect = 3e-29 Identities = 79/82 (96%) Strand = Plus / Plus Query: 559 acaatgtttgagaagggacagagcaaaagaatttggggtgaactttataaagttattgac 618 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 699 acaatgttcgagaagggacagagcaaaagaatttggggtgaactctataaagttattgac 758 Query: 619 tcttcagatgttgttgtgcagg 640 |||||||||||||| ||||||| Sbjct: 759 tcttcagatgttgtcgtgcagg 780 Score = 121 bits (61), Expect = 6e-24 Identities = 92/101 (91%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 665 gtgttggatgccagggatccaatgggcacaagatgctaccatctagagaagcatctgaaa 724 |||||||||||||||||||||||||| || |||||||||||||| ||||| |||||| || Sbjct: 780 gtgttggatgccagggatccaatgggtactagatgctaccatctggagaaacatctg-aa 838 Query: 725 ggagaacgccaaacacagacactcggtattcttactaaata 765 |||||| ||||| |||| ||||| ||||||||||||||||| Sbjct: 839 ggagaatgccaagcacaaacacttggtattcttactaaata 879 Score = 95.6 bits (48), Expect = 3e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 351 aagcacggcctccagtccaaggagctccccaacacccgcatcgagcctgactgccgctgg 410 ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 291 aagcacgacctccagtccaaggagctccccaacacccgcatcgagcccgatcgccgctgg 350 Query: 411 ttcg 414 |||| Sbjct: 351 ttcg 354