BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem116m20
         (961 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AK243594.1| Oryza sativa (japonica cultivar-group) cDNA, clo...   236   1e-58
ref|NM_001061133.1| Oryza sativa (japonica cultivar-group) Os05g...   236   1e-58
gb|DQ019637.1| Triticum aestivum mRNA transport factor (Y14) mRN...   204   5e-49
gb|BT017264.1| Zea mays clone EL01N0309H05.c mRNA sequence            147   1e-31
gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome...   131   6e-27

>dbj|AK243594.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100084C05,
           full insert sequence
          Length = 927

 Score =  236 bits (119), Expect = 1e-58
 Identities = 281/335 (83%)
 Strand = Plus / Plus

                                                                       
Query: 289 ccgactttgactccctgggctccgatgacggccccggacccctcagatctattgaggggt 348
           ||||||| |||||||| |||||||| |  ||||| || ||| || |||| ||||| || |
Sbjct: 332 ccgacttcgactccctcggctccgacggtggccctggccccgtccgatccattgaaggat 391

                                                                       
Query: 349 ggattattctggttactggcgttcatgaagaagcacaggaggacgatctccataatgctt 408
           ||||| | || || ||||| |||||||||||||| ||||| || ||||| || |||  ||
Sbjct: 392 ggattgtgctagtcactggggttcatgaagaagctcaggaagatgatcttcacaatattt 451

                                                                       
Query: 409 ttcgtgagtttgggcaagtcaagaacttgcatttgaatttagatcgtcgcactggatttg 468
           | || || |||||||| ||||||||||||||||||||||| ||||| || |||||||| |
Sbjct: 452 tccgggactttgggcaggtcaagaacttgcatttgaatttggatcgccgaactggattcg 511

                                                                       
Query: 469 tcaagggatatgctttgattgaatatgagagcttcgaggaagcccaggctgcaataaaag 528
           | |||||||||||| | ||||| ||||| |  ||||||||||| ||||||||||||||||
Sbjct: 512 tgaagggatatgctcttattgagtatgaaactttcgaggaagctcaggctgcaataaaag 571

                                                                       
Query: 529 caatggatggaactgagcttgttacaaagataataaatgttgactgggcatttagtaatg 588
           || ||||||||||||||||| | ||| | || |||| |||||| ||||||||||||||||
Sbjct: 572 cattggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatg 631

                                              
Query: 589 gtcctgtcaagcgaagaaatgttcgcaggagatca 623
           | ||||||||||| || ||| |||| | |||||||
Sbjct: 632 gccctgtcaagcgcaggaatattcggaagagatca 666


>ref|NM_001061133.1| Oryza sativa (japonica cultivar-group) Os05g0140500 (Os05g0140500)
           mRNA, complete cds
          Length = 615

 Score =  236 bits (119), Expect = 1e-58
 Identities = 281/335 (83%)
 Strand = Plus / Plus

                                                                       
Query: 289 ccgactttgactccctgggctccgatgacggccccggacccctcagatctattgaggggt 348
           ||||||| |||||||| |||||||| |  ||||| || ||| || |||| ||||| || |
Sbjct: 242 ccgacttcgactccctcggctccgacggtggccctggccccgtccgatccattgaaggat 301

                                                                       
Query: 349 ggattattctggttactggcgttcatgaagaagcacaggaggacgatctccataatgctt 408
           ||||| | || || ||||| |||||||||||||| ||||| || ||||| || |||  ||
Sbjct: 302 ggattgtgctagtcactggggttcatgaagaagctcaggaagatgatcttcacaatattt 361

                                                                       
Query: 409 ttcgtgagtttgggcaagtcaagaacttgcatttgaatttagatcgtcgcactggatttg 468
           | || || |||||||| ||||||||||||||||||||||| ||||| || |||||||| |
Sbjct: 362 tccgggactttgggcaggtcaagaacttgcatttgaatttggatcgccgaactggattcg 421

                                                                       
Query: 469 tcaagggatatgctttgattgaatatgagagcttcgaggaagcccaggctgcaataaaag 528
           | |||||||||||| | ||||| ||||| |  ||||||||||| ||||||||||||||||
Sbjct: 422 tgaagggatatgctcttattgagtatgaaactttcgaggaagctcaggctgcaataaaag 481

                                                                       
Query: 529 caatggatggaactgagcttgttacaaagataataaatgttgactgggcatttagtaatg 588
           || ||||||||||||||||| | ||| | || |||| |||||| ||||||||||||||||
Sbjct: 482 cattggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatg 541

                                              
Query: 589 gtcctgtcaagcgaagaaatgttcgcaggagatca 623
           | ||||||||||| || ||| |||| | |||||||
Sbjct: 542 gccctgtcaagcgcaggaatattcggaagagatca 576


>gb|DQ019637.1| Triticum aestivum mRNA transport factor (Y14) mRNA, complete cds
          Length = 978

 Score =  204 bits (103), Expect = 5e-49
 Identities = 244/291 (83%)
 Strand = Plus / Plus

                                                                       
Query: 308 ctccgatgacggccccggacccctcagatctattgaggggtggattattctggttactgg 367
           |||||||| |||||| |||||| |  | || ||||| ||||||||| | |||||||||||
Sbjct: 328 ctccgatggcggccctggacccgtgcgctccattgaagggtggattgtactggttactgg 387

                                                                       
Query: 368 cgttcatgaagaagcacaggaggacgatctccataatgcttttcgtgagtttgggcaagt 427
            |||||||||||||| |||||||| || |||||||||  |||  | || | |||||| ||
Sbjct: 388 agttcatgaagaagctcaggaggaggacctccataatattttcggggattatgggcaggt 447

                                                                       
Query: 428 caagaacttgcatttgaatttagatcgtcgcactggatttgtcaagggatatgctttgat 487
           ||||||||||||||||||||| ||||| || ||||||||||| |||||||||||| | ||
Sbjct: 448 caagaacttgcatttgaatttggatcgccggactggatttgtgaagggatatgctctaat 507

                                                                       
Query: 488 tgaatatgagagcttcgaggaagcccaggctgcaataaaagcaatggatggaactgagct 547
           ||| ||||||| ||| ||| ||||| ||  |||||||| || |   || |||||||||||
Sbjct: 508 tgagtatgagaactttgagcaagccaagcgtgcaataagagaatcagacggaactgagct 567

                                                              
Query: 548 tgttacaaagataataaatgttgactgggcatttagtaatggtcctgtcaa 598
           | || |  ||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 568 tctttcgcagataataagtgttgactgggcatttagtaatggccctgtcaa 618


>gb|BT017264.1| Zea mays clone EL01N0309H05.c mRNA sequence
          Length = 854

 Score =  147 bits (74), Expect = 1e-31
 Identities = 158/186 (84%)
 Strand = Plus / Plus

                                                                       
Query: 363 actggcgttcatgaagaagcacaggaggacgatctccataatgcttttcgtgagtttggg 422
           ||||| |||||||||||||| || || || || ||||| |||||||| |  || ||||||
Sbjct: 245 actggagttcatgaagaagctcaagaagatgacctccaaaatgctttccaagaatttggg 304

                                                                       
Query: 423 caagtcaagaacttgcatttgaatttagatcgtcgcactggatttgtcaagggatatgct 482
           || ||||| ||| ||||||||||||| || ||||| || |||||||||||||| || |||
Sbjct: 305 caggtcaaaaacctgcatttgaatttggaccgtcgtaccggatttgtcaaggggtacgct 364

                                                                       
Query: 483 ttgattgaatatgagagcttcgaggaagcccaggctgcaataaaagcaatggatggaact 542
           ||||||||||||||||  || || ||||| |||||||||||||||| | |||||||| ||
Sbjct: 365 ttgattgaatatgagaagtttgaagaagctcaggctgcaataaaagaactggatggagct 424

                 
Query: 543 gagctt 548
           ||||||
Sbjct: 425 gagctt 430


>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13,
              complete sequence
          Length = 126332

 Score =  131 bits (66), Expect = 6e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                          
Query: 472    agggatatgctttgattgaatatgagagcttcgaggaagcccaggctgcaataaaagcaa 531
              ||||||||||| | ||||| ||||| |  ||||||||||| |||||||||||||||||| 
Sbjct: 105089 agggatatgctcttattgagtatgaaactttcgaggaagctcaggctgcaataaaagcat 105148

                                                                          
Query: 532    tggatggaactgagcttgttacaaagataataaatgttgactgggcatttagtaatggtc 591
              ||||||||||||||||| | ||| | || |||| |||||| ||||||||||||||||| |
Sbjct: 105149 tggatggaactgagcttctaacacaaatcataagtgttgattgggcatttagtaatggcc 105208

                        
Query: 592    ctgtcaagcg 601
              ||||||||||
Sbjct: 105209 ctgtcaagcg 105218



 Score = 87.7 bits (44), Expect = 8e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                          
Query: 363    actggcgttcatgaagaagcacaggaggacgatctccataatgcttttcgtgagtttggg 422
              ||||| |||||||||||||| ||||| || ||||| || |||  ||| || || ||||||
Sbjct: 104684 actggggttcatgaagaagctcaggaagatgatcttcacaatattttccgggactttggg 104743

                                                          
Query: 423    caagtcaagaacttgcatttgaatttagatcgtcgcactggatt 466
              || ||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 104744 caggtcaagaacttgcatttgaatttggatcgccgaactggatt 104787