BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116m01 (1348 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D... 250 1e-62 emb|CT834997.1| Oryza sativa (indica cultivar-group) cDNA clone:... 230 1e-56 dbj|AK240975.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 230 1e-56 ref|NM_001049981.1| Oryza sativa (japonica cultivar-group) Os01g... 202 3e-48 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 250 bits (126), Expect = 1e-62 Identities = 168/182 (92%) Strand = Plus / Plus Query: 907 aaaatctcgcagatgggctatgtttgggtttgcagtgggtatgctaacagagtacgcaac 966 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 23000823 aaaatctcgcagatgggctatgtttgggtttgcagtagggatgctaacagagtacgcaac 23000882 Query: 967 aggctcggattttgttcagcaagtgaagatccttctctccaattttggaattgtggactt 1026 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 23000883 cggctcggattttgttcaacaagtgaagatccttctctccaattttgggattgtggattt 23000942 Query: 1027 ggattgatggcagatgtctggcgttattgttctgtataagtctgaagtacgatgtatctt 1086 ||| |||| || ||||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 23000943 ggactgatcgcggatgtttgacgttattgttctgtataagcatgaagtacaatgtatctt 23001002 Query: 1087 ct 1088 || Sbjct: 23001003 ct 23001004 Score = 218 bits (110), Expect = 4e-53 Identities = 137/146 (93%) Strand = Plus / Plus Query: 319 ggggtcgtgacgttggagtaccagaggaaggtggcaaaggacctgcaggactacttcaag 378 |||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 23000200 ggggccgtgacgttggagtaccagaggaaggtggccaaggatctgcaggattacttcaag 23000259 Query: 379 cagaagaagctggaggaggccgaccaggggcccttctttgggttcttgggcaagaatgag 438 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 23000260 cagaagaagctggacgaggctgaccagggtcccttctttgggttcttgggcaagaatgag 23000319 Query: 439 attgccaatggaaggtatgtttgccc 464 ||| ||||||||||||| |||||||| Sbjct: 23000320 atttccaatggaaggtacgtttgccc 23000345 Score = 123 bits (62), Expect = 2e-24 Identities = 102/114 (89%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1236 tatcttctattatccaacatatagaaagatcaatcttgcacattcttatatccttgactt 1295 |||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 23000997 tatcttcttttatccgacatatagaaagatcaatcttgcacattgctatatacttgactg 23001056 Query: 1296 catttgtgctgtcctgtca-attttgatgaatgtaaaatccacatttcagtttt 1348 |||||||| || ||||||| ||||||||||||| |||||||| |||||||||| Sbjct: 23001057 catttgtgatggcctgtcagtttttgatgaatgtcaaatccacttttcagtttt 23001110 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 cccaagacgccggctctgtccacccctccgacattgtcccagccgctgaccccggtgaag 225 |||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||| Sbjct: 23000047 cccaagacgccgactctgtccacacctccgacgctgtcccagccgcccaccccggtgaag 23000106 Query: 226 ccggctgcgccgacgtcgccgccgcc 251 ||||||||||| ||||| ||||||| Sbjct: 23000107 ccggctgcgccttcgtcgtcgccgcc 23000132 Score = 95.6 bits (48), Expect = 4e-16 Identities = 71/78 (91%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 81 gtcgttcgccgtgatcaggagctccaaggcggatgg---gcccaggagacccgcggcgcc 137 ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 22999971 gtcgttcgccgtgatcaggagctccaaggcggagggggcgcccaggagacccgccgcgcc 23000030 Query: 138 ccccctgtcgccgccgcc 155 || |||||||||||||| Sbjct: 23000031 gccgctgtcgccgccgcc 23000048 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 3 agcaatgtctttgtctccttccatcccttccatcaaggtgaaggtgggaggcgtc 57 |||||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct: 22999872 agcaatgtctctggctccctccatcccttccatcaaggtgaaggtgggaggcgtc 22999926 >dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 250 bits (126), Expect = 1e-62 Identities = 168/182 (92%) Strand = Plus / Plus Query: 907 aaaatctcgcagatgggctatgtttgggtttgcagtgggtatgctaacagagtacgcaac 966 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 71229 aaaatctcgcagatgggctatgtttgggtttgcagtagggatgctaacagagtacgcaac 71288 Query: 967 aggctcggattttgttcagcaagtgaagatccttctctccaattttggaattgtggactt 1026 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 71289 cggctcggattttgttcaacaagtgaagatccttctctccaattttgggattgtggattt 71348 Query: 1027 ggattgatggcagatgtctggcgttattgttctgtataagtctgaagtacgatgtatctt 1086 ||| |||| || ||||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 71349 ggactgatcgcggatgtttgacgttattgttctgtataagcatgaagtacaatgtatctt 71408 Query: 1087 ct 1088 || Sbjct: 71409 ct 71410 Score = 218 bits (110), Expect = 4e-53 Identities = 137/146 (93%) Strand = Plus / Plus Query: 319 ggggtcgtgacgttggagtaccagaggaaggtggcaaaggacctgcaggactacttcaag 378 |||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 70606 ggggccgtgacgttggagtaccagaggaaggtggccaaggatctgcaggattacttcaag 70665 Query: 379 cagaagaagctggaggaggccgaccaggggcccttctttgggttcttgggcaagaatgag 438 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 70666 cagaagaagctggacgaggctgaccagggtcccttctttgggttcttgggcaagaatgag 70725 Query: 439 attgccaatggaaggtatgtttgccc 464 ||| ||||||||||||| |||||||| Sbjct: 70726 atttccaatggaaggtacgtttgccc 70751 Score = 123 bits (62), Expect = 2e-24 Identities = 102/114 (89%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1236 tatcttctattatccaacatatagaaagatcaatcttgcacattcttatatccttgactt 1295 |||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 71403 tatcttcttttatccgacatatagaaagatcaatcttgcacattgctatatacttgactg 71462 Query: 1296 catttgtgctgtcctgtca-attttgatgaatgtaaaatccacatttcagtttt 1348 |||||||| || ||||||| ||||||||||||| |||||||| |||||||||| Sbjct: 71463 catttgtgatggcctgtcagtttttgatgaatgtcaaatccacttttcagtttt 71516 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 cccaagacgccggctctgtccacccctccgacattgtcccagccgctgaccccggtgaag 225 |||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||| Sbjct: 70453 cccaagacgccgactctgtccacacctccgacgctgtcccagccgcccaccccggtgaag 70512 Query: 226 ccggctgcgccgacgtcgccgccgcc 251 ||||||||||| ||||| ||||||| Sbjct: 70513 ccggctgcgccttcgtcgtcgccgcc 70538 Score = 95.6 bits (48), Expect = 4e-16 Identities = 71/78 (91%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 81 gtcgttcgccgtgatcaggagctccaaggcggatgg---gcccaggagacccgcggcgcc 137 ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 70377 gtcgttcgccgtgatcaggagctccaaggcggagggggcgcccaggagacccgccgcgcc 70436 Query: 138 ccccctgtcgccgccgcc 155 || |||||||||||||| Sbjct: 70437 gccgctgtcgccgccgcc 70454 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 3 agcaatgtctttgtctccttccatcccttccatcaaggtgaaggtgggaggcgtc 57 |||||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct: 70278 agcaatgtctctggctccctccatcccttccatcaaggtgaaggtgggaggcgtc 70332 >emb|CT834997.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN049C08, full insert sequence Length = 796 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Plus Query: 917 agatgggctatgtttgggtttgcagtgggtatgctaacagagtacgcaacaggctcggat 976 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 544 agatgggctatgtttgggtttgcagtagggatgctaacagagtacgcaaccggctcggat 603 Query: 977 tttgttcagcaagtgaagatccttctctccaattttggaattgtggacttggattgatgg 1036 |||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||| | Sbjct: 604 tttgttcaacaagtgaagatccttctctccaattttgggattgtggatttggactgatcg 663 Query: 1037 cagatgtctggcgttattgttctgtataagtctgaagtacgatgtatcttct 1088 | ||||| || ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 664 cggatgtttgacgttattgttctgtataagcatgaagtacaatgtatcttct 715 Score = 202 bits (102), Expect = 3e-48 Identities = 126/134 (94%) Strand = Plus / Plus Query: 319 ggggtcgtgacgttggagtaccagaggaaggtggcaaaggacctgcaggactacttcaag 378 |||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 412 ggggccgtgacgttggagtaccagaggaaggtggccaaggatctgcaggattacttcaag 471 Query: 379 cagaagaagctggaggaggccgaccaggggcccttctttgggttcttgggcaagaatgag 438 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 472 cagaagaagctggacgaggctgaccagggtcccttctttgggttcttgggcaagaatgag 531 Query: 439 attgccaatggaag 452 ||| |||||||||| Sbjct: 532 atttccaatggaag 545 Score = 111 bits (56), Expect = 7e-21 Identities = 127/149 (85%), Gaps = 15/149 (10%) Strand = Plus / Plus Query: 22 tccatcccttccatcaaggtgaaggtgggaggcgtc------tcgcctcc---ccaccgc 72 ||||| |||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 112 tccattccttccatcaaggtgaaggtgggaggcgtcgcggtctcgcctcctcgccaccgg 171 Query: 73 gcatgcaggtcg---ttcgccgtgatcaggagctccaaggcggatgg---gcccaggaga 126 |||||| ||||| ||||||||||||||||||||||||||||| || |||||||||| Sbjct: 172 gcatgccggtcgtcgttcgccgtgatcaggagctccaaggcggagggggcgcccaggaga 231 Query: 127 cccgcggcgccccccctgtcgccgccgcc 155 ||||| ||||| || |||||||||||||| Sbjct: 232 cccgccgcgccgccgctgtcgccgccgcc 260 Score = 103 bits (52), Expect = 2e-18 Identities = 76/84 (90%) Strand = Plus / Plus Query: 1236 tatcttctattatccaacatatagaaagatcaatcttgcacattcttatatccttgactt 1295 |||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 708 tatcttcttttatccgacatatagaaagatcaatcttgcacattgttatatacttgactg 767 Query: 1296 catttgtgctgtcctgtcaatttt 1319 |||||||| || ||||||| |||| Sbjct: 768 catttgtgatggcctgtcagtttt 791 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 cccaagacgccggctctgtccacccctccgacattgtcccagccgctgaccccggtgaag 225 |||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||| Sbjct: 259 cccaagacgccgactctgtccacacctccgacgctgtcccagccgcccaccccggtgaag 318 Query: 226 ccggctgcgccgacgtcgccgccgcc 251 ||||||||||| ||||| ||||||| Sbjct: 319 ccggctgcgccttcgtcgtcgccgcc 344 >dbj|AK240975.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065047K22, full insert sequence Length = 307 Score = 230 bits (116), Expect = 1e-56 Identities = 158/172 (91%) Strand = Plus / Plus Query: 917 agatgggctatgtttgggtttgcagtgggtatgctaacagagtacgcaacaggctcggat 976 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 97 agatgggctatgtttgggtttgcagtagggatgctaacagagtacgcaaccggctcggat 156 Query: 977 tttgttcagcaagtgaagatccttctctccaattttggaattgtggacttggattgatgg 1036 |||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||| | Sbjct: 157 tttgttcaacaagtgaagatccttctctccaattttgggattgtggatttggactgatcg 216 Query: 1037 cagatgtctggcgttattgttctgtataagtctgaagtacgatgtatcttct 1088 | ||||| || ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 217 cggatgtttgacgttattgttctgtataagcatgaagtacaatgtatcttct 268 Score = 143 bits (72), Expect = 2e-30 Identities = 87/92 (94%) Strand = Plus / Plus Query: 361 ctgcaggactacttcaagcagaagaagctggaggaggccgaccaggggcccttctttggg 420 |||||||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 7 ctgcaggattacttcaagcagaagaagctggacgaggctgaccagggtcccttctttggg 66 Query: 421 ttcttgggcaagaatgagattgccaatggaag 452 ||||||||||||||||||||| |||||||||| Sbjct: 67 ttcttgggcaagaatgagatttccaatggaag 98 >ref|NM_001049981.1| Oryza sativa (japonica cultivar-group) Os01g0589800 (Os01g0589800) mRNA, complete cds Length = 573 Score = 202 bits (102), Expect = 3e-48 Identities = 126/134 (94%) Strand = Plus / Plus Query: 319 ggggtcgtgacgttggagtaccagaggaaggtggcaaaggacctgcaggactacttcaag 378 |||| |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 325 ggggccgtgacgttggagtaccagaggaaggtggccaaggatctgcaggattacttcaag 384 Query: 379 cagaagaagctggaggaggccgaccaggggcccttctttgggttcttgggcaagaatgag 438 |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 385 cagaagaagctggacgaggctgaccagggtcccttctttgggttcttgggcaagaatgag 444 Query: 439 attgccaatggaag 452 ||| |||||||||| Sbjct: 445 atttccaatggaag 458 Score = 176 bits (89), Expect = 2e-40 Identities = 107/113 (94%) Strand = Plus / Plus Query: 917 agatgggctatgtttgggtttgcagtgggtatgctaacagagtacgcaacaggctcggat 976 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct: 457 agatgggctatgtttgggtttgcagtagggatgctaacagagtacgcaaccggctcggat 516 Query: 977 tttgttcagcaagtgaagatccttctctccaattttggaattgtggacttgga 1029 |||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 517 tttgttcaacaagtgaagatccttctctccaattttgggattgtggatttgga 569 Score = 99.6 bits (50), Expect = 3e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 cccaagacgccggctctgtccacccctccgacattgtcccagccgctgaccccggtgaag 225 |||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||| Sbjct: 172 cccaagacgccgactctgtccacacctccgacgctgtcccagccgcccaccccggtgaag 231 Query: 226 ccggctgcgccgacgtcgccgccgcc 251 ||||||||||| ||||| ||||||| Sbjct: 232 ccggctgcgccttcgtcgtcgccgcc 257 Score = 95.6 bits (48), Expect = 4e-16 Identities = 71/78 (91%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 81 gtcgttcgccgtgatcaggagctccaaggcggatgg---gcccaggagacccgcggcgcc 137 ||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct: 96 gtcgttcgccgtgatcaggagctccaaggcggagggggcgcccaggagacccgccgcgcc 155 Query: 138 ccccctgtcgccgccgcc 155 || |||||||||||||| Sbjct: 156 gccgctgtcgccgccgcc 173