BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116j07 (1005 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 244 6e-61 emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 244 6e-61 emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 244 6e-61 ref|NM_001072727.1| Oryza sativa (japonica cultivar-group) Os12g... 236 1e-58 ref|NM_001072316.1| Oryza sativa (japonica cultivar-group) Os11g... 212 2e-51 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 244 bits (123), Expect = 6e-61 Identities = 135/139 (97%) Strand = Plus / Plus Query: 478 ccgccgcacgagatcgtcgcgcggcgcgccgcggtgcacagctcggtgctggagggcgcc 537 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2751345 ccgccgcacgaggtcgtcgcgcggcgcgccgcggcgcacagctcggtgctggagggcgcc 2751404 Query: 538 gggaggacgctcaagggccgagacctccgccgcgtccgcaacgccgtcctgcgccgcacc 597 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2751405 gggaggacgctcaagggccgcgacctccgccgcgtccgcaacgccgtcctgcgccgcacc 2751464 Query: 598 ggcttcctcgactgagagg 616 || |||||||||||||||| Sbjct: 2751465 ggattcctcgactgagagg 2751483 Score = 167 bits (84), Expect = 1e-37 Identities = 197/234 (84%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 140 ccacgatggaccgcctcctgctcttccgccccccgagacccacccccgcccacgccgctg 199 |||| |||||||||||||||||||| ||||||| || ||| || || || | ||| | Sbjct: 2750977 ccaccatggaccgcctcctgctctttcgcccccggaaaccggcctcctcctcctccgtcg 2751036 Query: 200 ccgcggccgcggacggcgacctcctcgagctcgacgtcctctgggccgcctcctcggccc 259 |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| |||| Sbjct: 2751037 ccgcggtggcggacggcgacctcctcgagcgcgacgtcctctggcccgcctcctctgccc 2751096 Query: 260 ccggactcctcgccgcactccccgacgaggagggaaagaagaagaagaagcgcgctggcc 319 | || ||||||||||| ||||||||||| ||||| | ||||||||||||||||| |||| Sbjct: 2751097 caggcctcctcgccgcgctccccgacgacgaggggagcaagaagaagaagcgcgcgggcc 2751156 Query: 320 ---ccaccgtccgatccgccgcccgccccatcccggagaccgccgcgttgaccc 370 || |||| || |||||| |||| || |||||||||||||| ||||||||| Sbjct: 2751157 ccgccgccgtacggtccgcctcccgacctgtcccggagaccgccccgttgaccc 2751210 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 71 cccccaacctccgatgccggagcgccgccacctcgccggatatacgccgtagtggtgatc 130 |||||| |||||||||||||||||||||||| |||||||| || |||||| |||||||| Sbjct: 2750897 cccccaccctccgatgccggagcgccgccacatcgccggagatccgccgtcctggtgatc 2750956 Query: 131 cccgga 136 |||||| Sbjct: 2750957 cccgga 2750962 >emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 244 bits (123), Expect = 6e-61 Identities = 135/139 (97%) Strand = Plus / Minus Query: 478 ccgccgcacgagatcgtcgcgcggcgcgccgcggtgcacagctcggtgctggagggcgcc 537 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 119102 ccgccgcacgaggtcgtcgcgcggcgcgccgcggcgcacagctcggtgctggagggcgcc 119043 Query: 538 gggaggacgctcaagggccgagacctccgccgcgtccgcaacgccgtcctgcgccgcacc 597 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 119042 gggaggacgctcaagggccgcgacctccgccgcgtccgcaacgccgtcctgcgccgcacc 118983 Query: 598 ggcttcctcgactgagagg 616 || |||||||||||||||| Sbjct: 118982 ggattcctcgactgagagg 118964 Score = 167 bits (84), Expect = 1e-37 Identities = 197/234 (84%), Gaps = 3/234 (1%) Strand = Plus / Minus Query: 140 ccacgatggaccgcctcctgctcttccgccccccgagacccacccccgcccacgccgctg 199 |||| |||||||||||||||||||| ||||||| || ||| || || || | ||| | Sbjct: 119470 ccaccatggaccgcctcctgctctttcgcccccggaaaccggcctcctcctcctccgtcg 119411 Query: 200 ccgcggccgcggacggcgacctcctcgagctcgacgtcctctgggccgcctcctcggccc 259 |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| |||| Sbjct: 119410 ccgcggtggcggacggcgacctcctcgagcgcgacgtcctctggcccgcctcctctgccc 119351 Query: 260 ccggactcctcgccgcactccccgacgaggagggaaagaagaagaagaagcgcgctggcc 319 | || ||||||||||| ||||||||||| ||||| | ||||||||||||||||| |||| Sbjct: 119350 caggcctcctcgccgcgctccccgacgacgaggggagcaagaagaagaagcgcgcgggcc 119291 Query: 320 ---ccaccgtccgatccgccgcccgccccatcccggagaccgccgcgttgaccc 370 || |||| || |||||| |||| || |||||||||||||| ||||||||| Sbjct: 119290 ccgccgccgtacggtccgcctcccgacctgtcccggagaccgccccgttgaccc 119237 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Minus Query: 71 cccccaacctccgatgccggagcgccgccacctcgccggatatacgccgtagtggtgatc 130 |||||| |||||||||||||||||||||||| |||||||| || |||||| |||||||| Sbjct: 119550 cccccaccctccgatgccggagcgccgccacatcgccggagatccgccgtcctggtgatc 119491 Query: 131 cccgga 136 |||||| Sbjct: 119490 cccgga 119485 >emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 244 bits (123), Expect = 6e-61 Identities = 135/139 (97%) Strand = Plus / Plus Query: 478 ccgccgcacgagatcgtcgcgcggcgcgccgcggtgcacagctcggtgctggagggcgcc 537 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 120270 ccgccgcacgaggtcgtcgcgcggcgcgccgcggcgcacagctcggtgctggagggcgcc 120329 Query: 538 gggaggacgctcaagggccgagacctccgccgcgtccgcaacgccgtcctgcgccgcacc 597 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 120330 gggaggacgctcaagggccgcgacctccgccgcgtccgcaacgccgtcctgcgccgcacc 120389 Query: 598 ggcttcctcgactgagagg 616 || |||||||||||||||| Sbjct: 120390 ggattcctcgactgagagg 120408 Score = 167 bits (84), Expect = 1e-37 Identities = 197/234 (84%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 140 ccacgatggaccgcctcctgctcttccgccccccgagacccacccccgcccacgccgctg 199 |||| |||||||||||||||||||| ||||||| || ||| || || || | ||| | Sbjct: 119902 ccaccatggaccgcctcctgctctttcgcccccggaaaccggcctcctcctcctccgtcg 119961 Query: 200 ccgcggccgcggacggcgacctcctcgagctcgacgtcctctgggccgcctcctcggccc 259 |||||| |||||||||||||||||||||| ||||||||||||| |||||||||| |||| Sbjct: 119962 ccgcggtggcggacggcgacctcctcgagcgcgacgtcctctggcccgcctcctctgccc 120021 Query: 260 ccggactcctcgccgcactccccgacgaggagggaaagaagaagaagaagcgcgctggcc 319 | || ||||||||||| ||||||||||| ||||| | ||||||||||||||||| |||| Sbjct: 120022 caggcctcctcgccgcgctccccgacgacgaggggagcaagaagaagaagcgcgcgggcc 120081 Query: 320 ---ccaccgtccgatccgccgcccgccccatcccggagaccgccgcgttgaccc 370 || |||| || |||||| |||| || |||||||||||||| ||||||||| Sbjct: 120082 ccgccgccgtacggtccgcctcccgacctgtcccggagaccgccccgttgaccc 120135 Score = 83.8 bits (42), Expect = 1e-12 Identities = 60/66 (90%) Strand = Plus / Plus Query: 71 cccccaacctccgatgccggagcgccgccacctcgccggatatacgccgtagtggtgatc 130 |||||| |||||||||||||||||||||||| |||||||| || |||||| |||||||| Sbjct: 119822 cccccaccctccgatgccggagcgccgccacatcgccggagatccgccgtcctggtgatc 119881 Query: 131 cccgga 136 |||||| Sbjct: 119882 cccgga 119887 >ref|NM_001072727.1| Oryza sativa (japonica cultivar-group) Os12g0156000 (Os12g0156000) mRNA, complete cds Length = 498 Score = 236 bits (119), Expect = 1e-58 Identities = 131/135 (97%) Strand = Plus / Plus Query: 478 ccgccgcacgagatcgtcgcgcggcgcgccgcggtgcacagctcggtgctggagggcgcc 537 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 364 ccgccgcacgaggtcgtcgcgcggcgcgccgcggcgcacagctcggtgctggagggcgcc 423 Query: 538 gggaggacgctcaagggccgagacctccgccgcgtccgcaacgccgtcctgcgccgcacc 597 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gggaggacgctcaagggccgcgacctccgccgcgtccgcaacgccgtcctgcgccgcacc 483 Query: 598 ggcttcctcgactga 612 || |||||||||||| Sbjct: 484 ggattcctcgactga 498 Score = 165 bits (83), Expect = 4e-37 Identities = 193/229 (84%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 145 atggaccgcctcctgctcttccgccccccgagacccacccccgcccacgccgctgccgcg 204 |||||||||||||||||||| ||||||| || ||| || || || | ||| |||||| Sbjct: 1 atggaccgcctcctgctctttcgcccccggaaaccggcctcctcctcctccgtcgccgcg 60 Query: 205 gccgcggacggcgacctcctcgagctcgacgtcctctgggccgcctcctcggcccccgga 264 | |||||||||||||||||||||| ||||||||||||| |||||||||| ||||| || Sbjct: 61 gtggcggacggcgacctcctcgagcgcgacgtcctctggcccgcctcctctgccccaggc 120 Query: 265 ctcctcgccgcactccccgacgaggagggaaagaagaagaagaagcgcgctggcc---cc 321 ||||||||||| ||||||||||| ||||| | ||||||||||||||||| |||| || Sbjct: 121 ctcctcgccgcgctccccgacgacgaggggagcaagaagaagaagcgcgcgggccccgcc 180 Query: 322 accgtccgatccgccgcccgccccatcccggagaccgccgcgttgaccc 370 |||| || |||||| |||| || |||||||||||||| ||||||||| Sbjct: 181 gccgtacggtccgcctcccgacctgtcccggagaccgccccgttgaccc 229 >ref|NM_001072316.1| Oryza sativa (japonica cultivar-group) Os11g0154300 (Os11g0154300) mRNA, complete cds Length = 963 Score = 212 bits (107), Expect = 2e-51 Identities = 151/165 (91%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 452 gcggggaggacggggaggct---atggttccgccgcacgagatcgtcgcgcggcgcgccg 508 |||| |||||||||||||| ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 462 gcggcgaggacggggaggcggccatggtcccgccccacgagatcgtggcgcggcgcgccg 521 Query: 509 cggtgcacagctcggtgctggagggcgccgggaggacgctcaagggccgagacctccgcc 568 ||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||| || Sbjct: 522 cggcgcacagctcggtgctggagggctccgggaggacgctcaaggggcgcgacctccacc 581 Query: 569 gcgtccgcaacgccgtcctgcgccgcaccggcttcctcgactgag 613 ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 582 gcgtccgcaacgccgtcctccgccgcaccggcttcctcgactgag 626