BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116b19 (1000 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243692.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 293 7e-76 gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome... 278 4e-71 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 278 4e-71 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 266 2e-67 emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa... 266 2e-67 >dbj|AK243692.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100090P21, full insert sequence Length = 1101 Score = 293 bits (148), Expect = 7e-76 Identities = 369/440 (83%), Gaps = 2/440 (0%) Strand = Plus / Plus Query: 375 cgccgccgcacagtgtgtcatctgtcttgcagaatatgaagataaagatgtactccgcgt 434 ||||||||| |||||||| ||||||||||||| |||||||| ||||| ||||| || | Sbjct: 434 cgccgccgcccagtgtgttgtctgtcttgcagactatgaagagaaagacgtacttcgtat 493 Query: 435 tcttccttactgtggccacaatttccatgtggcctgcatagatacttggttaaagcagca 494 |||||||||||||||||||||||| |||| | |||||||||| |||||| | |||||| Sbjct: 494 tcttccttactgtggccacaattttcatgcgttgtgcatagatatttggttgatgcagca 553 Query: 495 ctcaacatgcccagtttgtagaatttcattgtgtgactaccctgatagcaagcacactgt 554 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 554 ctcaacatgcccggtttgtagaatttcattgtgtgactaccctgatagcaagcagacaat 613 Query: 555 gcctcctctacaaagtccagtgatattacctccatgttctcctgaagcatcaagatcaga 614 | ||||||||| |||| ||||||| ||||||||||||| |||||| ||||||| ||||| Sbjct: 614 gtctcctctaccaagtgaagtgataatacctccatgttcccctgaaccatcaaggtcaga 673 Query: 615 cccatgccgttgcctatttgtcagcacagggcattcgccaaggacatcagaggttcttag 674 | |||| |||||| |||||| |||| |||||||| ||||||||||| ||||||||| Sbjct: 674 tcaatgcaattgcctgtttgtcggcacggggcattcaccaaggacatctcaggttcttat 733 Query: 675 acatgaacccaaccaggcgaatcagatagtgcgtggtccatccgtggatggaggat-aca 733 | ||||||| ||||| |||||| || | | | ||||||| ||||| || |||| ||| Sbjct: 734 aaatgaacctgaccagtcgaatcggacattatatagtccatcagtggaagg-ggataaca 792 Query: 734 acctgacattttctgaggttaactctcctggtgaaaatagcaaccaaacagtaaaacagc 793 || || ||| ||||| ||||| |||||||||||| || |||||||||| | ||| ||| Sbjct: 793 acttgccatcatctgaagttaatcctcctggtgaaattaacaaccaaacaatgaaaaagc 852 Query: 794 acatggagagtcctcgtatt 813 | |||||| || ||||||| Sbjct: 853 atgtggagaatcatcgtatt 872 Score = 165 bits (83), Expect = 4e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 70 cgcgatggcgtccggcgtgtcgacgagcatggtgctcacgctgctgggcttctgcgtcag 129 |||||||||||| || |||||||||||||||||||| |||||||| |||||||||| ||| Sbjct: 122 cgcgatggcgtcgggggtgtcgacgagcatggtgctgacgctgctcggcttctgcggcag 181 Query: 130 cgtcctcttcatcgtcttcgtctgctcccgcctcgtctgcgccctggtccgccgccgccg 189 ||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||| ||| Sbjct: 182 cgtcctcttcatcgtcttcgtctgcacccgcctcgcctgctccctcctccgccgccaccg 241 Query: 190 ccgccgc 196 ||||||| Sbjct: 242 ccgccgc 248 >gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 278 bits (140), Expect = 4e-71 Identities = 352/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 395 tctgtcttgcagaatatgaagataaagatgtactccgcgttcttccttactgtggccaca 454 ||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 104927 tctgtcttgcagactatgaagagaaagacgtacttcgtattcttccttactgtggccaca 104868 Query: 455 atttccatgtggcctgcatagatacttggttaaagcagcactcaacatgcccagtttgta 514 |||| |||| | |||||||||| |||||| | |||||||||||||||||| ||||||| Sbjct: 104867 attttcatgcgttgtgcatagatatttggttgatgcagcactcaacatgcccggtttgta 104808 Query: 515 gaatttcattgtgtgactaccctgatagcaagcacactgtgcctcctctacaaagtccag 574 |||||||||||||||||||||||||||||||||| || || ||||||||| |||| || Sbjct: 104807 gaatttcattgtgtgactaccctgatagcaagcagacaatgtctcctctaccaagtgaag 104748 Query: 575 tgatattacctccatgttctcctgaagcatcaagatcagacccatgccgttgcctatttg 634 ||||| ||||||||||||| |||||| ||||||| ||||| | |||| |||||| |||| Sbjct: 104747 tgataatacctccatgttcccctgaaccatcaaggtcagatcaatgcaattgcctgtttg 104688 Query: 635 tcagcacagggcattcgccaaggacatcagaggttcttagacatgaacccaaccaggcga 694 || |||| |||||||| ||||||||||| ||||||||| | ||||||| ||||| ||| Sbjct: 104687 tcggcacggggcattcaccaaggacatctcaggttcttataaatgaacctgaccagtcga 104628 Query: 695 atcagatagtgcgtggtccatccgtggatggaggat-acaacctgacattttctgaggtt 753 ||| || | | | ||||||| ||||| || |||| ||||| || ||| ||||| ||| Sbjct: 104627 atcggacattatatagtccatcagtggaagg-ggataacaacttgccatcatctgaagtt 104569 Query: 754 aactctcctggtgaaaatagcaaccaaacagtaaaacagcacatggagagtcctcgtatt 813 || |||||||||||| || |||||||||| | ||| |||| |||||| || ||||||| Sbjct: 104568 aatcctcctggtgaaattaacaaccaaacaatgaaaaagcatgtggagaatcatcgtatt 104509 Score = 165 bits (83), Expect = 4e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 70 cgcgatggcgtccggcgtgtcgacgagcatggtgctcacgctgctgggcttctgcgtcag 129 |||||||||||| || |||||||||||||||||||| |||||||| |||||||||| ||| Sbjct: 106884 cgcgatggcgtcgggggtgtcgacgagcatggtgctgacgctgctcggcttctgcggcag 106825 Query: 130 cgtcctcttcatcgtcttcgtctgctcccgcctcgtctgcgccctggtccgccgccgccg 189 ||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||| ||| Sbjct: 106824 cgtcctcttcatcgtcttcgtctgcacccgcctcgcctgctccctcctccgccgccaccg 106765 Query: 190 ccgccgc 196 ||||||| Sbjct: 106764 ccgccgc 106758 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 278 bits (140), Expect = 4e-71 Identities = 352/420 (83%), Gaps = 2/420 (0%) Strand = Plus / Minus Query: 395 tctgtcttgcagaatatgaagataaagatgtactccgcgttcttccttactgtggccaca 454 ||||||||||||| |||||||| ||||| ||||| || ||||||||||||||||||||| Sbjct: 2328928 tctgtcttgcagactatgaagagaaagacgtacttcgtattcttccttactgtggccaca 2328869 Query: 455 atttccatgtggcctgcatagatacttggttaaagcagcactcaacatgcccagtttgta 514 |||| |||| | |||||||||| |||||| | |||||||||||||||||| ||||||| Sbjct: 2328868 attttcatgcgttgtgcatagatatttggttgatgcagcactcaacatgcccggtttgta 2328809 Query: 515 gaatttcattgtgtgactaccctgatagcaagcacactgtgcctcctctacaaagtccag 574 |||||||||||||||||||||||||||||||||| || || ||||||||| |||| || Sbjct: 2328808 gaatttcattgtgtgactaccctgatagcaagcagacaatgtctcctctaccaagtgaag 2328749 Query: 575 tgatattacctccatgttctcctgaagcatcaagatcagacccatgccgttgcctatttg 634 ||||| ||||||||||||| |||||| ||||||| ||||| | |||| |||||| |||| Sbjct: 2328748 tgataatacctccatgttcccctgaaccatcaaggtcagatcaatgcaattgcctgtttg 2328689 Query: 635 tcagcacagggcattcgccaaggacatcagaggttcttagacatgaacccaaccaggcga 694 || |||| |||||||| ||||||||||| ||||||||| | ||||||| ||||| ||| Sbjct: 2328688 tcggcacggggcattcaccaaggacatctcaggttcttataaatgaacctgaccagtcga 2328629 Query: 695 atcagatagtgcgtggtccatccgtggatggaggat-acaacctgacattttctgaggtt 753 ||| || | | | ||||||| ||||| || |||| ||||| || ||| ||||| ||| Sbjct: 2328628 atcggacattatatagtccatcagtggaagg-ggataacaacttgccatcatctgaagtt 2328570 Query: 754 aactctcctggtgaaaatagcaaccaaacagtaaaacagcacatggagagtcctcgtatt 813 || |||||||||||| || |||||||||| | ||| |||| |||||| || ||||||| Sbjct: 2328569 aatcctcctggtgaaattaacaaccaaacaatgaaaaagcatgtggagaatcatcgtatt 2328510 Score = 165 bits (83), Expect = 4e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 70 cgcgatggcgtccggcgtgtcgacgagcatggtgctcacgctgctgggcttctgcgtcag 129 |||||||||||| || |||||||||||||||||||| |||||||| |||||||||| ||| Sbjct: 2330885 cgcgatggcgtcgggggtgtcgacgagcatggtgctgacgctgctcggcttctgcggcag 2330826 Query: 130 cgtcctcttcatcgtcttcgtctgctcccgcctcgtctgcgccctggtccgccgccgccg 189 ||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||| ||| Sbjct: 2330825 cgtcctcttcatcgtcttcgtctgcacccgcctcgcctgctccctcctccgccgccaccg 2330766 Query: 190 ccgccgc 196 ||||||| Sbjct: 2330765 ccgccgc 2330759 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 266 bits (134), Expect = 2e-67 Identities = 265/309 (85%), Gaps = 6/309 (1%) Strand = Plus / Minus Query: 395 tctgtcttgcagaatatgaagataaagatgtactccgcgttcttccttactgtggccaca 454 |||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 2427152 tctgtcttgcagaatacgaagagaaagatgtgctccgtgttcttccctactgtggccacg 2427093 Query: 455 atttccatgtggcctgcatagatacttggttaaagcagcactcaacatgcccagtttgta 514 || || |||||||||||||||| |||| ||| ||| || ||||||||||||||||||| Sbjct: 2427092 gctttcacgtggcctgcatagatatttggctaatgcaccattcaacatgcccagtttgta 2427033 Query: 515 gaatttcattgtgtgactaccctgatagcaagcacactgtgcctcctctacaaagtccag 574 ||||||| ||||| ||||||||||||||||||||||| || ||||| ||| |||| ||| Sbjct: 2427032 gaatttcgttgtgcgactaccctgatagcaagcacacgatgtctcctgtaccaagtgcag 2426973 Query: 575 tgat------attacctccatgttctcctgaagcatcaagatcagacccatgccgttgcc 628 |||| |||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 2426972 tgataataccattacctccatgttctcctgaagcatcaagatcagatcaatgcaattgcc 2426913 Query: 629 tatttgtcagcacagggcattcgccaaggacatcagaggttcttagacatgaacccaacc 688 |||| ||| | ||||| ||||||||||||||||| ||||||| ||| ||||||| ||| Sbjct: 2426912 tattcgtcggaacaggtcattcgccaaggacatcgcaggttctcagaaatgaacctgacc 2426853 Query: 689 aggcgaatc 697 ||| ||||| Sbjct: 2426852 aggtgaatc 2426844 Score = 145 bits (73), Expect = 4e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 86 gtgtcgacgagcatggtgctcacgctgctgggcttctgcgtcagcgtcctcttcatcgtc 145 ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 2428821 gtgtcgaggagcatggtgctgacgctgctggggttctgcgtcagcgtcctcttcatcgtc 2428762 Query: 146 ttcgtctgctcccgcctcgtctgcgccct 174 ||||||||||||||||||| ||||||||| Sbjct: 2428761 ttcgtctgctcccgcctcgcctgcgccct 2428733 >emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 266 bits (134), Expect = 2e-67 Identities = 265/309 (85%), Gaps = 6/309 (1%) Strand = Plus / Minus Query: 395 tctgtcttgcagaatatgaagataaagatgtactccgcgttcttccttactgtggccaca 454 |||||||||||||||| ||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 152343 tctgtcttgcagaatacgaagagaaagatgtgctccgtgttcttccctactgtggccacg 152284 Query: 455 atttccatgtggcctgcatagatacttggttaaagcagcactcaacatgcccagtttgta 514 || || |||||||||||||||| |||| ||| ||| || ||||||||||||||||||| Sbjct: 152283 gctttcacgtggcctgcatagatatttggctaatgcaccattcaacatgcccagtttgta 152224 Query: 515 gaatttcattgtgtgactaccctgatagcaagcacactgtgcctcctctacaaagtccag 574 ||||||| ||||| ||||||||||||||||||||||| || ||||| ||| |||| ||| Sbjct: 152223 gaatttcgttgtgcgactaccctgatagcaagcacacgatgtctcctgtaccaagtgcag 152164 Query: 575 tgat------attacctccatgttctcctgaagcatcaagatcagacccatgccgttgcc 628 |||| |||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 152163 tgataataccattacctccatgttctcctgaagcatcaagatcagatcaatgcaattgcc 152104 Query: 629 tatttgtcagcacagggcattcgccaaggacatcagaggttcttagacatgaacccaacc 688 |||| ||| | ||||| ||||||||||||||||| ||||||| ||| ||||||| ||| Sbjct: 152103 tattcgtcggaacaggtcattcgccaaggacatcgcaggttctcagaaatgaacctgacc 152044 Query: 689 aggcgaatc 697 ||| ||||| Sbjct: 152043 aggtgaatc 152035 Score = 145 bits (73), Expect = 4e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 86 gtgtcgacgagcatggtgctcacgctgctgggcttctgcgtcagcgtcctcttcatcgtc 145 ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 154012 gtgtcgaggagcatggtgctgacgctgctggggttctgcgtcagcgtcctcttcatcgtc 153953 Query: 146 ttcgtctgctcccgcctcgtctgcgccct 174 ||||||||||||||||||| ||||||||| Sbjct: 153952 ttcgtctgctcccgcctcgcctgcgccct 153924