BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem116b06 (936 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050250.1| Oryza sativa (japonica cultivar-group) Os01g... 305 2e-79 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 dbj|AK111374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 2e-79 dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic D... 305 2e-79 >ref|NM_001050250.1| Oryza sativa (japonica cultivar-group) Os01g0648700 (Os01g0648700) mRNA, partial cds Length = 1148 Score = 305 bits (154), Expect = 2e-79 Identities = 337/398 (84%) Strand = Plus / Plus Query: 166 cgccgatcttggccgtgcgttcgtgcactgcggcaagcttttggacaagctgctggcgca 225 ||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||| Sbjct: 183 cgccgatcttggcgacgcgctcctgcgctgcggcaagctcctggacaagctcctggagca 242 Query: 226 cgaggacgggtgggtgttcgccgagccggtggacgcgcgcgccctcggcatcctcgatta 285 ||||||||||||||| |||||||||||||||||||||||||||||| || || |||| || Sbjct: 243 cgaggacgggtgggtcttcgccgagccggtggacgcgcgcgccctccgcctcgtcgacta 302 Query: 286 ctacaccgtcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 ctacctgcgcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 362 Query: 346 ccgctacgacgatccgctcgcattcgccgccgatgtccgtctcaccttccgcaacgccat 405 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 363 ccgctacgcggacccgtgggcgttcgccgccgacgtccggctcaccttcaacaacgccat 422 Query: 406 gacctacaacaaccgaggcgaccccgtgtataagagcgcggcggagctctccgccatctt 465 | ||||||||| | |||||||||||||| ||||||| || |||||||||| ||||| Sbjct: 423 gtcctacaacagcgcgggcgaccccgtgtacgagagcgccgccgagctctccgaaatctt 482 Query: 466 cgagtccgggtgggcttctatccttgcggcgccgccgccgccggcggacgccgagcgcaa 525 |||| |||||||| | || | || |||||||| |||| ||| | |||||||||||||| Sbjct: 483 cgaggccgggtggccctccgttctcgcggcgccaccgcgcccgcccgacgccgagcgcaa 542 Query: 526 ggggaggctcaccgatgagctaccgcggctgccggtgg 563 | ||||||||| | | ||| |||||||||||||||| Sbjct: 543 gcggaggctcagtggtttgctcccgcggctgccggtgg 580 Score = 103 bits (52), Expect = 1e-18 Identities = 103/120 (85%) Strand = Plus / Plus Query: 605 gggtgcctgcgggaggagaatgggagggtggaggtggacctggacaaggcagatgcggcg 664 |||||||||||||||| ||| |||| | |||||||||||||||||| ||| || | ||| Sbjct: 622 gggtgcctgcgggaggtgaacgggatgatggaggtggacctggacagggcggactccgcg 681 Query: 665 acgctggacgagctcgatcggctggtggaggagcacggggcagctcttgccagcgtggtt 724 ||||||||||||||||| ||| |||| | |||||||||||| || || ||| |||||||| Sbjct: 682 acgctggacgagctcgaccggatggtcgcggagcacggggccgccctcgccggcgtggtt 741 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 305 bits (154), Expect = 2e-79 Identities = 337/398 (84%) Strand = Plus / Minus Query: 166 cgccgatcttggccgtgcgttcgtgcactgcggcaagcttttggacaagctgctggcgca 225 ||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||| Sbjct: 26170756 cgccgatcttggcgacgcgctcctgcgctgcggcaagctcctggacaagctcctggagca 26170697 Query: 226 cgaggacgggtgggtgttcgccgagccggtggacgcgcgcgccctcggcatcctcgatta 285 ||||||||||||||| |||||||||||||||||||||||||||||| || || |||| || Sbjct: 26170696 cgaggacgggtgggtcttcgccgagccggtggacgcgcgcgccctccgcctcgtcgacta 26170637 Query: 286 ctacaccgtcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26170636 ctacctgcgcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 26170577 Query: 346 ccgctacgacgatccgctcgcattcgccgccgatgtccgtctcaccttccgcaacgccat 405 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 26170576 ccgctacgcggacccgtgggcgttcgccgccgacgtccggctcaccttcaacaacgccat 26170517 Query: 406 gacctacaacaaccgaggcgaccccgtgtataagagcgcggcggagctctccgccatctt 465 | ||||||||| | |||||||||||||| ||||||| || |||||||||| ||||| Sbjct: 26170516 gtcctacaacagcgcgggcgaccccgtgtacgagagcgccgccgagctctccgaaatctt 26170457 Query: 466 cgagtccgggtgggcttctatccttgcggcgccgccgccgccggcggacgccgagcgcaa 525 |||| |||||||| | || | || |||||||| |||| ||| | |||||||||||||| Sbjct: 26170456 cgaggccgggtggccctccgttctcgcggcgccaccgcgcccgcccgacgccgagcgcaa 26170397 Query: 526 ggggaggctcaccgatgagctaccgcggctgccggtgg 563 | ||||||||| | | ||| |||||||||||||||| Sbjct: 26170396 gcggaggctcagtggtttgctcccgcggctgccggtgg 26170359 Score = 103 bits (52), Expect = 1e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 605 gggtgcctgcgggaggagaatgggagggtggaggtggacctggacaaggcagatgcggcg 664 |||||||||||||||| ||| |||| | |||||||||||||||||| ||| || | ||| Sbjct: 26170317 gggtgcctgcgggaggtgaacgggatgatggaggtggacctggacagggcggactccgcg 26170258 Query: 665 acgctggacgagctcgatcggctggtggaggagcacggggcagctcttgccagcgtggtt 724 ||||||||||||||||| ||| |||| | |||||||||||| || || ||| |||||||| Sbjct: 26170257 acgctggacgagctcgaccggatggtcgcggagcacggggccgccctcgccggcgtggtt 26170198 >dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 305 bits (154), Expect = 2e-79 Identities = 337/398 (84%) Strand = Plus / Minus Query: 166 cgccgatcttggccgtgcgttcgtgcactgcggcaagcttttggacaagctgctggcgca 225 ||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||| Sbjct: 76173 cgccgatcttggcgacgcgctcctgcgctgcggcaagctcctggacaagctcctggagca 76114 Query: 226 cgaggacgggtgggtgttcgccgagccggtggacgcgcgcgccctcggcatcctcgatta 285 ||||||||||||||| |||||||||||||||||||||||||||||| || || |||| || Sbjct: 76113 cgaggacgggtgggtcttcgccgagccggtggacgcgcgcgccctccgcctcgtcgacta 76054 Query: 286 ctacaccgtcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76053 ctacctgcgcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 75994 Query: 346 ccgctacgacgatccgctcgcattcgccgccgatgtccgtctcaccttccgcaacgccat 405 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 75993 ccgctacgcggacccgtgggcgttcgccgccgacgtccggctcaccttcaacaacgccat 75934 Query: 406 gacctacaacaaccgaggcgaccccgtgtataagagcgcggcggagctctccgccatctt 465 | ||||||||| | |||||||||||||| ||||||| || |||||||||| ||||| Sbjct: 75933 gtcctacaacagcgcgggcgaccccgtgtacgagagcgccgccgagctctccgaaatctt 75874 Query: 466 cgagtccgggtgggcttctatccttgcggcgccgccgccgccggcggacgccgagcgcaa 525 |||| |||||||| | || | || |||||||| |||| ||| | |||||||||||||| Sbjct: 75873 cgaggccgggtggccctccgttctcgcggcgccaccgcgcccgcccgacgccgagcgcaa 75814 Query: 526 ggggaggctcaccgatgagctaccgcggctgccggtgg 563 | ||||||||| | | ||| |||||||||||||||| Sbjct: 75813 gcggaggctcagtggtttgctcccgcggctgccggtgg 75776 Score = 103 bits (52), Expect = 1e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 605 gggtgcctgcgggaggagaatgggagggtggaggtggacctggacaaggcagatgcggcg 664 |||||||||||||||| ||| |||| | |||||||||||||||||| ||| || | ||| Sbjct: 75734 gggtgcctgcgggaggtgaacgggatgatggaggtggacctggacagggcggactccgcg 75675 Query: 665 acgctggacgagctcgatcggctggtggaggagcacggggcagctcttgccagcgtggtt 724 ||||||||||||||||| ||| |||| | |||||||||||| || || ||| |||||||| Sbjct: 75674 acgctggacgagctcgaccggatggtcgcggagcacggggccgccctcgccggcgtggtt 75615 >dbj|AK111374.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A09, full insert sequence Length = 1151 Score = 305 bits (154), Expect = 2e-79 Identities = 337/398 (84%) Strand = Plus / Plus Query: 166 cgccgatcttggccgtgcgttcgtgcactgcggcaagcttttggacaagctgctggcgca 225 ||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||| Sbjct: 186 cgccgatcttggcgacgcgctcctgcgctgcggcaagctcctggacaagctcctggagca 245 Query: 226 cgaggacgggtgggtgttcgccgagccggtggacgcgcgcgccctcggcatcctcgatta 285 ||||||||||||||| |||||||||||||||||||||||||||||| || || |||| || Sbjct: 246 cgaggacgggtgggtcttcgccgagccggtggacgcgcgcgccctccgcctcgtcgacta 305 Query: 286 ctacaccgtcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ctacctgcgcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 365 Query: 346 ccgctacgacgatccgctcgcattcgccgccgatgtccgtctcaccttccgcaacgccat 405 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 366 ccgctacgcggacccgtgggcgttcgccgccgacgtccggctcaccttcaacaacgccat 425 Query: 406 gacctacaacaaccgaggcgaccccgtgtataagagcgcggcggagctctccgccatctt 465 | ||||||||| | |||||||||||||| ||||||| || |||||||||| ||||| Sbjct: 426 gtcctacaacagcgcgggcgaccccgtgtacgagagcgccgccgagctctccgaaatctt 485 Query: 466 cgagtccgggtgggcttctatccttgcggcgccgccgccgccggcggacgccgagcgcaa 525 |||| |||||||| | || | || |||||||| |||| ||| | |||||||||||||| Sbjct: 486 cgaggccgggtggccctccgttctcgcggcgccaccgcgcccgcccgacgccgagcgcaa 545 Query: 526 ggggaggctcaccgatgagctaccgcggctgccggtgg 563 | ||||||||| | | ||| |||||||||||||||| Sbjct: 546 gcggaggctcagtggtttgctcccgcggctgccggtgg 583 Score = 95.6 bits (48), Expect = 3e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 605 gggtgcctgcgggaggagaatgggagggtggaggtggacctggacaaggcagatgcggcg 664 |||||||||||||||| ||| |||| | |||||||||||||||||| ||| || | ||| Sbjct: 625 gggtgcctgcgggaggtgaacgggatgatggaggtggacctggacagggcggactccgcg 684 Query: 665 acgctggacgagctcgatcggctggtggaggagcacggggcagctcttgccagcgtggtt 724 ||||||||||||||||| ||| ||| | |||||||||||| || || ||| |||||||| Sbjct: 685 acgctggacgagctcgaccggatggccgcggagcacggggccgccctcgccggcgtggtt 744 >dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 305 bits (154), Expect = 2e-79 Identities = 337/398 (84%) Strand = Plus / Minus Query: 166 cgccgatcttggccgtgcgttcgtgcactgcggcaagcttttggacaagctgctggcgca 225 ||||||||||||| ||| || ||| |||||||||||| |||||||||| |||| ||| Sbjct: 11886 cgccgatcttggcgacgcgctcctgcgctgcggcaagctcctggacaagctcctggagca 11827 Query: 226 cgaggacgggtgggtgttcgccgagccggtggacgcgcgcgccctcggcatcctcgatta 285 ||||||||||||||| |||||||||||||||||||||||||||||| || || |||| || Sbjct: 11826 cgaggacgggtgggtcttcgccgagccggtggacgcgcgcgccctccgcctcgtcgacta 11767 Query: 286 ctacaccgtcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11766 ctacctgcgcatctccgaccccatggacctcggcaccgtccgccgccgcctcgagcgccg 11707 Query: 346 ccgctacgacgatccgctcgcattcgccgccgatgtccgtctcaccttccgcaacgccat 405 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||||||||| Sbjct: 11706 ccgctacgcggacccgtgggcgttcgccgccgacgtccggctcaccttcaacaacgccat 11647 Query: 406 gacctacaacaaccgaggcgaccccgtgtataagagcgcggcggagctctccgccatctt 465 | ||||||||| | |||||||||||||| ||||||| || |||||||||| ||||| Sbjct: 11646 gtcctacaacagcgcgggcgaccccgtgtacgagagcgccgccgagctctccgaaatctt 11587 Query: 466 cgagtccgggtgggcttctatccttgcggcgccgccgccgccggcggacgccgagcgcaa 525 |||| |||||||| | || | || |||||||| |||| ||| | |||||||||||||| Sbjct: 11586 cgaggccgggtggccctccgttctcgcggcgccaccgcgcccgcccgacgccgagcgcaa 11527 Query: 526 ggggaggctcaccgatgagctaccgcggctgccggtgg 563 | ||||||||| | | ||| |||||||||||||||| Sbjct: 11526 gcggaggctcagtggtttgctcccgcggctgccggtgg 11489 Score = 103 bits (52), Expect = 1e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 605 gggtgcctgcgggaggagaatgggagggtggaggtggacctggacaaggcagatgcggcg 664 |||||||||||||||| ||| |||| | |||||||||||||||||| ||| || | ||| Sbjct: 11447 gggtgcctgcgggaggtgaacgggatgatggaggtggacctggacagggcggactccgcg 11388 Query: 665 acgctggacgagctcgatcggctggtggaggagcacggggcagctcttgccagcgtggtt 724 ||||||||||||||||| ||| |||| | |||||||||||| || || ||| |||||||| Sbjct: 11387 acgctggacgagctcgaccggatggtcgcggagcacggggccgccctcgccggcgtggtt 11328