BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem115p17
         (1074 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001055679.1| Oryza sativa (japonica cultivar-group) Os03g...   109   2e-20
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   109   2e-20
gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str...   109   2e-20
dbj|AK067953.1| Oryza sativa (japonica cultivar-group) cDNA clon...   109   2e-20

>ref|NM_001055679.1| Oryza sativa (japonica cultivar-group) Os03g0177300 (Os03g0177300)
           mRNA, complete cds
          Length = 1626

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 479 gcgctggacgggtaggttctcggcctcggcacggaggcgctcgtcgtcgcgtcgtgggtc 538
           ||||||||||||  ||| |||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 166 gcgctggacggggcggtgctcggcctcggcacggcggcgctcgccgtcgcctcgtgggtc 225

                                                                       
Query: 539 aggtacctctccacctctgggccgctccgacgcatctccaccacgccggcggtcgccatc 598
           | ||||||| || | || |||| ||| || |||||| || || ||||||||| |||||| 
Sbjct: 226 aagtacctcgccgcgtccgggcagctgcggcgcatcgcctccgcgccggcggccgccata 285

                                  
Query: 599 cctgacctcagctccctcctcgc 621
           || |||||| |||| ||||||||
Sbjct: 286 cccgacctccgctcgctcctcgc 308


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                           
Query: 479     gcgctggacgggtaggttctcggcctcggcacggaggcgctcgtcgtcgcgtcgtgggtc 538
               ||||||||||||  ||| |||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 4071957 gcgctggacggggcggtgctcggcctcggcacggcggcgctcgccgtcgcctcgtgggtc 4072016

                                                                           
Query: 539     aggtacctctccacctctgggccgctccgacgcatctccaccacgccggcggtcgccatc 598
               | ||||||| || | || |||| ||| || |||||| || || ||||||||| |||||| 
Sbjct: 4072017 aagtacctcgccgcgtccgggcagctgcggcgcatcgcctccgcgccggcggccgccata 4072076

                                      
Query: 599     cctgacctcagctccctcctcgc 621
               || |||||| |||| ||||||||
Sbjct: 4072077 cccgacctccgctcgctcctcgc 4072099


>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Minus

                                                                         
Query: 479   gcgctggacgggtaggttctcggcctcggcacggaggcgctcgtcgtcgcgtcgtgggtc 538
             ||||||||||||  ||| |||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 27522 gcgctggacggggcggtgctcggcctcggcacggcggcgctcgccgtcgcctcgtgggtc 27463

                                                                         
Query: 539   aggtacctctccacctctgggccgctccgacgcatctccaccacgccggcggtcgccatc 598
             | ||||||| || | || |||| ||| || |||||| || || ||||||||| |||||| 
Sbjct: 27462 aagtacctcgccgcgtccgggcagctgcggcgcatcgcctccgcgccggcggccgccata 27403

                                    
Query: 599   cctgacctcagctccctcctcgc 621
             || |||||| |||| ||||||||
Sbjct: 27402 cccgacctccgctcgctcctcgc 27380


>dbj|AK067953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128J19, full
           insert sequence
          Length = 1629

 Score =  109 bits (55), Expect = 2e-20
 Identities = 121/143 (84%)
 Strand = Plus / Plus

                                                                       
Query: 479 gcgctggacgggtaggttctcggcctcggcacggaggcgctcgtcgtcgcgtcgtgggtc 538
           ||||||||||||  ||| |||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 169 gcgctggacggggcggtgctcggcctcggcacggcggcgctcgccgtcgcctcgtgggtc 228

                                                                       
Query: 539 aggtacctctccacctctgggccgctccgacgcatctccaccacgccggcggtcgccatc 598
           | ||||||| || | || |||| ||| || |||||| || || ||||||||| |||||| 
Sbjct: 229 aagtacctcgccgcgtccgggcagctgcggcgcatcgcctccgcgccggcggccgccata 288

                                  
Query: 599 cctgacctcagctccctcctcgc 621
           || |||||| |||| ||||||||
Sbjct: 289 cccgacctccgctcgctcctcgc 311