BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem114n19 (937 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001062775.1| Oryza sativa (japonica cultivar-group) Os05g... 238 3e-59 gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 238 3e-59 gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome... 238 3e-59 gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 238 3e-59 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 238 3e-59 >ref|NM_001062775.1| Oryza sativa (japonica cultivar-group) Os05g0550200 (Os05g0550200) mRNA, complete cds Length = 4125 Score = 238 bits (120), Expect = 3e-59 Identities = 168/184 (91%) Strand = Plus / Minus Query: 143 agttgcggacatcctgctatggaggaacaggaacttatcggcagggatccttgcaggggc 202 ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| || Sbjct: 3925 agttgcggacatcatgctatggagggacaggaatttatcggccgggatccttgcaggcgc 3866 Query: 203 cacactgatatggttcctattctatgtggttgaatacaacatagtaacgctcctttgcca 262 |||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 3865 cacattgatatggttcctatttgatgtggctgaatacaacttagtaacactcctttgcca 3806 Query: 263 cattgcactccttggaatgcttttgctcttcatttggtccaatgccgcacctctcctcga 322 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| | || Sbjct: 3805 cattgcactccttgggatgcttgtgctcttcatttggtccaatgctgcacctctctttga 3746 Query: 323 cagg 326 |||| Sbjct: 3745 cagg 3742 Score = 143 bits (72), Expect = 1e-30 Identities = 126/144 (87%) Strand = Plus / Minus Query: 322 acagggcccctccacagatcccagaagtcgtcgtttctgaacatgccttcagagaaattg 381 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 3719 acagggcacctccacggatcccagaagtgattgtttctgaacatgccttcagagaacttg 3660 Query: 382 cactgaccatccattccaaactggcgcactttgtatcagtcctatatgacatttcatgcg 441 ||||||| | ||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct: 3659 cactgacattgcattccaaagtggcgcacttttcagcagtcctgtatgacatttcatgcg 3600 Query: 442 ggaatgatctgaagaagttccttg 465 |||| || || | ||||||||||| Sbjct: 3599 ggaaagaactcaggaagttccttg 3576 Score = 129 bits (65), Expect = 2e-26 Identities = 119/137 (86%) Strand = Plus / Minus Query: 540 tttttgtgtgctctcactttcccggtgctgtacgaaagatacgaaactgaagtggaccat 599 |||||||||||||||||||| || | |||||| |||||||| || |||||||| |||||| Sbjct: 3031 tttttgtgtgctctcactttgcctgcgctgtatgaaagatatgagactgaagtagaccat 2972 Query: 600 ctaatcgccaagggtggtgaagaccttaagaagttctataagaagattgattccaatgtg 659 | | ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2971 ttggttgccaaaggtggtcaagacctcaagaaattctacaagaagattgattccaatgtg 2912 Query: 660 ctcaaaaagataccaag 676 || || ||||||||||| Sbjct: 2911 ctgaataagataccaag 2895 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 467 ggtgatcggatctctgtggatattggcagtaattggagatacatgcagcttcacaactct 526 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 3353 ggtgataggatctctgtggatattggcagttattggagagacatgcagtttcacaactct 3294 Query: 527 agtatatgttgg 538 | |||||||||| Sbjct: 3293 actatatgttgg 3282 >gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 238 bits (120), Expect = 3e-59 Identities = 168/184 (91%) Strand = Plus / Minus Query: 143 agttgcggacatcctgctatggaggaacaggaacttatcggcagggatccttgcaggggc 202 ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| || Sbjct: 35950 agttgcggacatcatgctatggagggacaggaatttatcggccgggatccttgcaggcgc 35891 Query: 203 cacactgatatggttcctattctatgtggttgaatacaacatagtaacgctcctttgcca 262 |||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 35890 cacattgatatggttcctatttgatgtggctgaatacaacttagtaacactcctttgcca 35831 Query: 263 cattgcactccttggaatgcttttgctcttcatttggtccaatgccgcacctctcctcga 322 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| | || Sbjct: 35830 cattgcactccttgggatgcttgtgctcttcatttggtccaatgctgcacctctctttga 35771 Query: 323 cagg 326 |||| Sbjct: 35770 cagg 35767 Score = 149 bits (75), Expect = 2e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 540 tttttgtgtgctctcactttcccggtgctgtacgaaagatacgaaactgaagtggaccat 599 |||||||||||||||||||| || | |||||| |||||||| || |||||||| |||||| Sbjct: 34927 tttttgtgtgctctcactttgcctgcgctgtatgaaagatatgagactgaagtagaccat 34868 Query: 600 ctaatcgccaagggtggtgaagaccttaagaagttctataagaagattgattccaatgtg 659 | | ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 34867 ttggttgccaaaggtggtcaagacctcaagaaattctacaagaagattgattccaatgtg 34808 Query: 660 ctcaaaaagataccaagaggccctgtgaatataaaagttcactaaaatata 710 || || ||||||||||| || ||||| || | ||||||||||||| ||||| Sbjct: 34807 ctgaataagataccaagggggcctgtcaagacaaaagttcactaagatata 34757 Score = 143 bits (72), Expect = 1e-30 Identities = 126/144 (87%) Strand = Plus / Minus Query: 322 acagggcccctccacagatcccagaagtcgtcgtttctgaacatgccttcagagaaattg 381 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 35615 acagggcacctccacggatcccagaagtgattgtttctgaacatgccttcagagaacttg 35556 Query: 382 cactgaccatccattccaaactggcgcactttgtatcagtcctatatgacatttcatgcg 441 ||||||| | ||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct: 35555 cactgacattgcattccaaagtggcgcacttttcagcagtcctgtatgacatttcatgcg 35496 Query: 442 ggaatgatctgaagaagttccttg 465 |||| || || | ||||||||||| Sbjct: 35495 ggaaagaactcaggaagttccttg 35472 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 467 ggtgatcggatctctgtggatattggcagtaattggagatacatgcagcttcacaactct 526 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 35249 ggtgataggatctctgtggatattggcagttattggagagacatgcagtttcacaactct 35190 Query: 527 agtatatgttgg 538 | |||||||||| Sbjct: 35189 actatatgttgg 35178 >gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 238 bits (120), Expect = 3e-59 Identities = 168/184 (91%) Strand = Plus / Minus Query: 143 agttgcggacatcctgctatggaggaacaggaacttatcggcagggatccttgcaggggc 202 ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| || Sbjct: 111135 agttgcggacatcatgctatggagggacaggaatttatcggccgggatccttgcaggcgc 111076 Query: 203 cacactgatatggttcctattctatgtggttgaatacaacatagtaacgctcctttgcca 262 |||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 111075 cacattgatatggttcctatttgatgtggctgaatacaacttagtaacactcctttgcca 111016 Query: 263 cattgcactccttggaatgcttttgctcttcatttggtccaatgccgcacctctcctcga 322 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| | || Sbjct: 111015 cattgcactccttgggatgcttgtgctcttcatttggtccaatgctgcacctctctttga 110956 Query: 323 cagg 326 |||| Sbjct: 110955 cagg 110952 Score = 149 bits (75), Expect = 2e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 540 tttttgtgtgctctcactttcccggtgctgtacgaaagatacgaaactgaagtggaccat 599 |||||||||||||||||||| || | |||||| |||||||| || |||||||| |||||| Sbjct: 110112 tttttgtgtgctctcactttgcctgcgctgtatgaaagatatgagactgaagtagaccat 110053 Query: 600 ctaatcgccaagggtggtgaagaccttaagaagttctataagaagattgattccaatgtg 659 | | ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 110052 ttggttgccaaaggtggtcaagacctcaagaaattctacaagaagattgattccaatgtg 109993 Query: 660 ctcaaaaagataccaagaggccctgtgaatataaaagttcactaaaatata 710 || || ||||||||||| || ||||| || | ||||||||||||| ||||| Sbjct: 109992 ctgaataagataccaagggggcctgtcaagacaaaagttcactaagatata 109942 Score = 143 bits (72), Expect = 1e-30 Identities = 126/144 (87%) Strand = Plus / Minus Query: 322 acagggcccctccacagatcccagaagtcgtcgtttctgaacatgccttcagagaaattg 381 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 110800 acagggcacctccacggatcccagaagtgattgtttctgaacatgccttcagagaacttg 110741 Query: 382 cactgaccatccattccaaactggcgcactttgtatcagtcctatatgacatttcatgcg 441 ||||||| | ||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct: 110740 cactgacattgcattccaaagtggcgcacttttcagcagtcctgtatgacatttcatgcg 110681 Query: 442 ggaatgatctgaagaagttccttg 465 |||| || || | ||||||||||| Sbjct: 110680 ggaaagaactcaggaagttccttg 110657 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 467 ggtgatcggatctctgtggatattggcagtaattggagatacatgcagcttcacaactct 526 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 110434 ggtgataggatctctgtggatattggcagttattggagagacatgcagtttcacaactct 110375 Query: 527 agtatatgttgg 538 | |||||||||| Sbjct: 110374 actatatgttgg 110363 >gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 238 bits (120), Expect = 3e-59 Identities = 168/184 (91%) Strand = Plus / Minus Query: 143 agttgcggacatcctgctatggaggaacaggaacttatcggcagggatccttgcaggggc 202 ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| || Sbjct: 135638 agttgcggacatcatgctatggagggacaggaatttatcggccgggatccttgcaggcgc 135579 Query: 203 cacactgatatggttcctattctatgtggttgaatacaacatagtaacgctcctttgcca 262 |||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 135578 cacattgatatggttcctatttgatgtggctgaatacaacttagtaacactcctttgcca 135519 Query: 263 cattgcactccttggaatgcttttgctcttcatttggtccaatgccgcacctctcctcga 322 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| | || Sbjct: 135518 cattgcactccttgggatgcttgtgctcttcatttggtccaatgctgcacctctctttga 135459 Query: 323 cagg 326 |||| Sbjct: 135458 cagg 135455 Score = 149 bits (75), Expect = 2e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 540 tttttgtgtgctctcactttcccggtgctgtacgaaagatacgaaactgaagtggaccat 599 |||||||||||||||||||| || | |||||| |||||||| || |||||||| |||||| Sbjct: 134615 tttttgtgtgctctcactttgcctgcgctgtatgaaagatatgagactgaagtagaccat 134556 Query: 600 ctaatcgccaagggtggtgaagaccttaagaagttctataagaagattgattccaatgtg 659 | | ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 134555 ttggttgccaaaggtggtcaagacctcaagaaattctacaagaagattgattccaatgtg 134496 Query: 660 ctcaaaaagataccaagaggccctgtgaatataaaagttcactaaaatata 710 || || ||||||||||| || ||||| || | ||||||||||||| ||||| Sbjct: 134495 ctgaataagataccaagggggcctgtcaagacaaaagttcactaagatata 134445 Score = 143 bits (72), Expect = 1e-30 Identities = 126/144 (87%) Strand = Plus / Minus Query: 322 acagggcccctccacagatcccagaagtcgtcgtttctgaacatgccttcagagaaattg 381 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 135303 acagggcacctccacggatcccagaagtgattgtttctgaacatgccttcagagaacttg 135244 Query: 382 cactgaccatccattccaaactggcgcactttgtatcagtcctatatgacatttcatgcg 441 ||||||| | ||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct: 135243 cactgacattgcattccaaagtggcgcacttttcagcagtcctgtatgacatttcatgcg 135184 Query: 442 ggaatgatctgaagaagttccttg 465 |||| || || | ||||||||||| Sbjct: 135183 ggaaagaactcaggaagttccttg 135160 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 467 ggtgatcggatctctgtggatattggcagtaattggagatacatgcagcttcacaactct 526 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 134937 ggtgataggatctctgtggatattggcagttattggagagacatgcagtttcacaactct 134878 Query: 527 agtatatgttgg 538 | |||||||||| Sbjct: 134877 actatatgttgg 134866 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 238 bits (120), Expect = 3e-59 Identities = 168/184 (91%) Strand = Plus / Minus Query: 143 agttgcggacatcctgctatggaggaacaggaacttatcggcagggatccttgcaggggc 202 ||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||| || Sbjct: 27104554 agttgcggacatcatgctatggagggacaggaatttatcggccgggatccttgcaggcgc 27104495 Query: 203 cacactgatatggttcctattctatgtggttgaatacaacatagtaacgctcctttgcca 262 |||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 27104494 cacattgatatggttcctatttgatgtggctgaatacaacttagtaacactcctttgcca 27104435 Query: 263 cattgcactccttggaatgcttttgctcttcatttggtccaatgccgcacctctcctcga 322 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| | || Sbjct: 27104434 cattgcactccttgggatgcttgtgctcttcatttggtccaatgctgcacctctctttga 27104375 Query: 323 cagg 326 |||| Sbjct: 27104374 cagg 27104371 Score = 149 bits (75), Expect = 2e-32 Identities = 147/171 (85%) Strand = Plus / Minus Query: 540 tttttgtgtgctctcactttcccggtgctgtacgaaagatacgaaactgaagtggaccat 599 |||||||||||||||||||| || | |||||| |||||||| || |||||||| |||||| Sbjct: 27103531 tttttgtgtgctctcactttgcctgcgctgtatgaaagatatgagactgaagtagaccat 27103472 Query: 600 ctaatcgccaagggtggtgaagaccttaagaagttctataagaagattgattccaatgtg 659 | | ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 27103471 ttggttgccaaaggtggtcaagacctcaagaaattctacaagaagattgattccaatgtg 27103412 Query: 660 ctcaaaaagataccaagaggccctgtgaatataaaagttcactaaaatata 710 || || ||||||||||| || ||||| || | ||||||||||||| ||||| Sbjct: 27103411 ctgaataagataccaagggggcctgtcaagacaaaagttcactaagatata 27103361 Score = 143 bits (72), Expect = 1e-30 Identities = 126/144 (87%) Strand = Plus / Minus Query: 322 acagggcccctccacagatcccagaagtcgtcgtttctgaacatgccttcagagaaattg 381 ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 27104219 acagggcacctccacggatcccagaagtgattgtttctgaacatgccttcagagaacttg 27104160 Query: 382 cactgaccatccattccaaactggcgcactttgtatcagtcctatatgacatttcatgcg 441 ||||||| | ||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct: 27104159 cactgacattgcattccaaagtggcgcacttttcagcagtcctgtatgacatttcatgcg 27104100 Query: 442 ggaatgatctgaagaagttccttg 465 |||| || || | ||||||||||| Sbjct: 27104099 ggaaagaactcaggaagttccttg 27104076 Score = 103 bits (52), Expect = 1e-18 Identities = 67/72 (93%) Strand = Plus / Minus Query: 467 ggtgatcggatctctgtggatattggcagtaattggagatacatgcagcttcacaactct 526 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 27103853 ggtgataggatctctgtggatattggcagttattggagagacatgcagtttcacaactct 27103794 Query: 527 agtatatgttgg 538 | |||||||||| Sbjct: 27103793 actatatgttgg 27103782