BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem114n10
         (1181 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001048986.1| Oryza sativa (japonica cultivar-group) Os01g...   232   3e-57
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   216   2e-52
dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D...   216   2e-52

>ref|NM_001048986.1| Oryza sativa (japonica cultivar-group) Os01g0224200 (Os01g0224200)
           mRNA, complete cds
          Length = 768

 Score =  232 bits (117), Expect = 3e-57
 Identities = 168/185 (90%)
 Strand = Plus / Plus

                                                                       
Query: 319 gaggcggccgccctggccgaggtggccgaggagacgaggagcctccacgccatccgcgcg 378
           ||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 172 gaggcggccgcgctggacgcggtggccgaggaggcgaggagcctccacgccatccgcgcc 231

                                                                       
Query: 379 gcgctcgaggacctcgaggaccagttcgaatgctttcttgctgtgcaatcacagcaccaa 438
           ||||||||||||||||||||||||||||| ||||| |||||||| || |||||||| |||
Sbjct: 232 gcgctcgaggacctcgaggaccagttcgagtgcttccttgctgtccagtcacagcaacaa 291

                                                                       
Query: 439 gcagaacgagattatgcattagcaaggttggagcagagtcgcatcatgcttgcaataaga 498
           ||||||||||||  | || |||||||||||||||| ||||| || |||||||||||||||
Sbjct: 292 gcagaacgagatatttcactagcaaggttggagcaaagtcgtattatgcttgcaataaga 351

                
Query: 499 ttaaa 503
           |||||
Sbjct: 352 ttaaa 356



 Score =  194 bits (98), Expect = 6e-46
 Identities = 101/102 (99%)
 Strand = Plus / Plus

                                                                       
Query: 133 atggagcccgaggaggcggaggccgtgctggagaccatctgggacctccacgacaaggtc 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggagcccgaggaggcggaggccgtgctggagaccatctgggacctccacgacaaggtc 60

                                                     
Query: 193 agcgacgccatccacgccctctcccgcgcccacttcctgcgc 234
           ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  agcgacgccatccacgccctctcccgcgcgcacttcctgcgc 102


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  216 bits (109), Expect = 2e-52
 Identities = 125/129 (96%), Gaps = 1/129 (0%)
 Strand = Plus / Minus

                                                                           
Query: 107     gaaccttccggagctagggtttccag-atggagcccgaggaggcggaggccgtgctggag 165
               |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 6831797 gaaccttcgggagctagggtttccgggatggagcccgaggaggcggaggccgtgctggag 6831738

                                                                           
Query: 166     accatctgggacctccacgacaaggtcagcgacgccatccacgccctctcccgcgcccac 225
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6831737 accatctgggacctccacgacaaggtcagcgacgccatccacgccctctcccgcgcgcac 6831678

                        
Query: 226     ttcctgcgc 234
               |||||||||
Sbjct: 6831677 ttcctgcgc 6831669



 Score =  143 bits (72), Expect = 2e-30
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                           
Query: 319     gaggcggccgccctggccgaggtggccgaggagacgaggagcctccacgccatccgcgcg 378
               ||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 6831599 gaggcggccgcgctggacgcggtggccgaggaggcgaggagcctccacgccatccgcgcc 6831540

                                                       
Query: 379     gcgctcgaggacctcgaggaccagttcgaatgctttcttg 418
               ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 6831539 gcgctcgaggacctcgaggaccagttcgagtgcttccttg 6831500



 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                           
Query: 418     gctgtgcaatcacagcaccaagcagaacgagattatgcattagcaaggttggagcagagt 477
               ||||| || |||||||| |||||||||||||||  | || |||||||||||||||| |||
Sbjct: 6829814 gctgtccagtcacagcaacaagcagaacgagatatttcactagcaaggttggagcaaagt 6829755

                                         
Query: 478     cgcatcatgcttgcaataagattaaa 503
               || || ||||||||||||||||||||
Sbjct: 6829754 cgtattatgcttgcaataagattaaa 6829729


>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0417G05
          Length = 147803

 Score =  216 bits (109), Expect = 2e-52
 Identities = 125/129 (96%), Gaps = 1/129 (0%)
 Strand = Plus / Minus

                                                                          
Query: 107    gaaccttccggagctagggtttccag-atggagcccgaggaggcggaggccgtgctggag 165
              |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 113858 gaaccttcgggagctagggtttccgggatggagcccgaggaggcggaggccgtgctggag 113799

                                                                          
Query: 166    accatctgggacctccacgacaaggtcagcgacgccatccacgccctctcccgcgcccac 225
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 113798 accatctgggacctccacgacaaggtcagcgacgccatccacgccctctcccgcgcgcac 113739

                       
Query: 226    ttcctgcgc 234
              |||||||||
Sbjct: 113738 ttcctgcgc 113730



 Score =  143 bits (72), Expect = 2e-30
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                          
Query: 319    gaggcggccgccctggccgaggtggccgaggagacgaggagcctccacgccatccgcgcg 378
              ||||||||||| |||| || ||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 113660 gaggcggccgcgctggacgcggtggccgaggaggcgaggagcctccacgccatccgcgcc 113601

                                                      
Query: 379    gcgctcgaggacctcgaggaccagttcgaatgctttcttg 418
              ||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 113600 gcgctcgaggacctcgaggaccagttcgagtgcttccttg 113561



 Score = 91.7 bits (46), Expect = 6e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                          
Query: 418    gctgtgcaatcacagcaccaagcagaacgagattatgcattagcaaggttggagcagagt 477
              ||||| || |||||||| |||||||||||||||  | || |||||||||||||||| |||
Sbjct: 111875 gctgtccagtcacagcaacaagcagaacgagatatttcactagcaaggttggagcaaagt 111816

                                        
Query: 478    cgcatcatgcttgcaataagattaaa 503
              || || ||||||||||||||||||||
Sbjct: 111815 cgtattatgcttgcaataagattaaa 111790