BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem114n06 (1128 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060130.1| Oryza sativa (japonica cultivar-group) Os04g... 484 e-133 dbj|AK112099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133 dbj|AK111914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133 dbj|AB101647.1| Oryza sativa (japonica cultivar-group) Roc4 mRNA... 472 e-129 ref|NM_001054253.1| Oryza sativa (japonica cultivar-group) Os02g... 278 5e-71 >ref|NM_001060130.1| Oryza sativa (japonica cultivar-group) Os04g0569100 (Os04g0569100) mRNA, complete cds Length = 3088 Score = 484 bits (244), Expect = e-133 Identities = 516/606 (85%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 1 cattggggaggatgtgcatgtcgtggcacggaagagtgtggatgaacctggggtgccacc 60 ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| || Sbjct: 1957 cattggggaggatgtgcatgtaatggcgcggaagagtgtggatgaacctggaacgccgcc 2016 Query: 61 aggtgtggtgctgagtgctgccacatcagtttggatgcatgtgatgcccgaacagctctt 120 |||||||||||| |||||||| ||||| || ||||||| ||||||||| |||| |||||| Sbjct: 2017 aggtgtggtgcttagtgctgctacatctgtgtggatgcctgtgatgcctgaacggctctt 2076 Query: 121 caacttcctgcgcaacgaggggctgcgtgctgaatgggacatcctaagcaacggtggccc 180 ||||||| ||| |||| |||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2077 caacttcttgcacaacaaggggctgcgtgctgaatgggatatcctcagcaatggtggccc 2136 Query: 181 tatgcaggaggtgacaaacatcgccaaggggcaacaggatggcaactccgtatctctact 240 ||||||||||||||||| ||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 2137 tatgcaggaggtgacaagcattgccaaggggcaacagaatggcaataccgtatgtctact 2196 Query: 241 gagggccagtccaacgaacaccaaccagaacagcatgctgatcctacaggagacgtgcac 300 || ||| ||||| || || ||| |||||||||||||||||||||||||||||||| | Sbjct: 2197 gaaggctagtcccaccaaagacaagcagaacagcatgctgatcctacaggagacgtgtgc 2256 Query: 301 cgacgcatcttgctcaatggtcgtgtacgccccagtggacatcccagcaatgcaacttgt 360 |||||||| | |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 2257 agacgcatccggttcaatggttgtgtatgctcctgtagacatcccagcaatgcaccttgt 2316 Query: 361 catgggtggaggggactcgacgtatgttgctttattgccatccggttttgtcattctacc 420 |||| |||| ||||| ||| | | || || | | ||||| ||||||| ||| || || Sbjct: 2317 catgagtggtggggattcgtcatgcgtcgcccttcttccatcaggttttgccatcctgcc 2376 Query: 421 tggcgggcctagcatcggtggcgccgggcacaagactggcagctcgttgcttactgttgc 480 || |||||||||||| ||||| | ||||||| ||| | || ||||| || ||||| Sbjct: 2377 tgctgggcctagcatc---ggcgcagatcacaagatgggcggttcattgctcaccgttgc 2433 Query: 481 attccagatacttgtcaacagtcagcccaccgctaagctcaccgtggagtcagtagagac 540 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 2434 attccagatacttgccaacagccagcccagtgctaagctcacggtggagtcagtcgagac 2493 Query: 541 cgtgaacaaccttatctcttgcaccatcaacaagatcaagacggcgctgcactgcgatgt 600 ||||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2494 cgtgagcaaccttatctcctgcaccatcaagaagatcaagacggcgctgcattgcgacgt 2553 Query: 601 ctgaac 606 ||||| Sbjct: 2554 gtgaac 2559 Score = 168 bits (85), Expect = 3e-38 Identities = 107/113 (94%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 666 gagtcaagaacgaaccgcgaaat-gcaagtgacctttgctaggtggtaaggaccggacgg 724 |||||||||||||||||||| || | ||| |||||||||||||||| ||||||||||||| Sbjct: 2611 gagtcaagaacgaaccgcgacataggaagggacctttgctaggtggcaaggaccggacgg 2670 Query: 725 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcggcctc 777 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2671 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcagcctc 2723 >dbj|AK112099.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E06, full insert sequence Length = 3089 Score = 484 bits (244), Expect = e-133 Identities = 516/606 (85%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 1 cattggggaggatgtgcatgtcgtggcacggaagagtgtggatgaacctggggtgccacc 60 ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| || Sbjct: 1958 cattggggaggatgtgcatgtaatggcgcggaagagtgtggatgaacctggaacgccgcc 2017 Query: 61 aggtgtggtgctgagtgctgccacatcagtttggatgcatgtgatgcccgaacagctctt 120 |||||||||||| |||||||| ||||| || ||||||| ||||||||| |||| |||||| Sbjct: 2018 aggtgtggtgcttagtgctgctacatctgtgtggatgcctgtgatgcctgaacggctctt 2077 Query: 121 caacttcctgcgcaacgaggggctgcgtgctgaatgggacatcctaagcaacggtggccc 180 ||||||| ||| |||| |||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2078 caacttcttgcacaacaaggggctgcgtgctgaatgggatatcctcagcaatggtggccc 2137 Query: 181 tatgcaggaggtgacaaacatcgccaaggggcaacaggatggcaactccgtatctctact 240 ||||||||||||||||| ||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 2138 tatgcaggaggtgacaagcattgccaaggggcaacagaatggcaataccgtatgtctact 2197 Query: 241 gagggccagtccaacgaacaccaaccagaacagcatgctgatcctacaggagacgtgcac 300 || ||| ||||| || || ||| |||||||||||||||||||||||||||||||| | Sbjct: 2198 gaaggctagtcccaccaaagacaagcagaacagcatgctgatcctacaggagacgtgtgc 2257 Query: 301 cgacgcatcttgctcaatggtcgtgtacgccccagtggacatcccagcaatgcaacttgt 360 |||||||| | |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 2258 agacgcatccggttcaatggttgtgtatgctcctgtagacatcccagcaatgcaccttgt 2317 Query: 361 catgggtggaggggactcgacgtatgttgctttattgccatccggttttgtcattctacc 420 |||| |||| ||||| ||| | | || || | | ||||| ||||||| ||| || || Sbjct: 2318 catgagtggtggggattcgtcatgcgtcgcccttcttccatcaggttttgccatcctgcc 2377 Query: 421 tggcgggcctagcatcggtggcgccgggcacaagactggcagctcgttgcttactgttgc 480 || |||||||||||| ||||| | ||||||| ||| | || ||||| || ||||| Sbjct: 2378 tgctgggcctagcatc---ggcgcagatcacaagatgggcggttcattgctcaccgttgc 2434 Query: 481 attccagatacttgtcaacagtcagcccaccgctaagctcaccgtggagtcagtagagac 540 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 2435 attccagatacttgccaacagccagcccagtgctaagctcacggtggagtcagtcgagac 2494 Query: 541 cgtgaacaaccttatctcttgcaccatcaacaagatcaagacggcgctgcactgcgatgt 600 ||||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2495 cgtgagcaaccttatctcctgcaccatcaagaagatcaagacggcgctgcattgcgacgt 2554 Query: 601 ctgaac 606 ||||| Sbjct: 2555 gtgaac 2560 Score = 168 bits (85), Expect = 3e-38 Identities = 107/113 (94%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 666 gagtcaagaacgaaccgcgaaat-gcaagtgacctttgctaggtggtaaggaccggacgg 724 |||||||||||||||||||| || | ||| |||||||||||||||| ||||||||||||| Sbjct: 2612 gagtcaagaacgaaccgcgacataggaagggacctttgctaggtggcaaggaccggacgg 2671 Query: 725 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcggcctc 777 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2672 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcagcctc 2724 >dbj|AK111914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128F17, full insert sequence Length = 3052 Score = 484 bits (244), Expect = e-133 Identities = 516/606 (85%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 1 cattggggaggatgtgcatgtcgtggcacggaagagtgtggatgaacctggggtgccacc 60 ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| || Sbjct: 1941 cattggggaggatgtgcatgtaatggcgcggaagagtgtggatgaacctggaacgccgcc 2000 Query: 61 aggtgtggtgctgagtgctgccacatcagtttggatgcatgtgatgcccgaacagctctt 120 |||||||||||| |||||||| ||||| || ||||||| ||||||||| |||| |||||| Sbjct: 2001 aggtgtggtgcttagtgctgctacatctgtgtggatgcctgtgatgcctgaacggctctt 2060 Query: 121 caacttcctgcgcaacgaggggctgcgtgctgaatgggacatcctaagcaacggtggccc 180 ||||||| ||| |||| |||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2061 caacttcttgcacaacaaggggctgcgtgctgaatgggatatcctcagcaatggtggccc 2120 Query: 181 tatgcaggaggtgacaaacatcgccaaggggcaacaggatggcaactccgtatctctact 240 ||||||||||||||||| ||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 2121 tatgcaggaggtgacaagcattgccaaggggcaacagaatggcaataccgtatgtctact 2180 Query: 241 gagggccagtccaacgaacaccaaccagaacagcatgctgatcctacaggagacgtgcac 300 || ||| ||||| || || ||| |||||||||||||||||||||||||||||||| | Sbjct: 2181 gaaggctagtcccaccaaagacaagcagaacagcatgctgatcctacaggagacgtgtgc 2240 Query: 301 cgacgcatcttgctcaatggtcgtgtacgccccagtggacatcccagcaatgcaacttgt 360 |||||||| | |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 2241 agacgcatccggttcaatggttgtgtatgctcctgtagacatcccagcaatgcaccttgt 2300 Query: 361 catgggtggaggggactcgacgtatgttgctttattgccatccggttttgtcattctacc 420 |||| |||| ||||| ||| | | || || | | ||||| ||||||| ||| || || Sbjct: 2301 catgagtggtggggattcgtcatgcgtcgcccttcttccatcaggttttgccatcctgcc 2360 Query: 421 tggcgggcctagcatcggtggcgccgggcacaagactggcagctcgttgcttactgttgc 480 || |||||||||||| ||||| | ||||||| ||| | || ||||| || ||||| Sbjct: 2361 tgctgggcctagcatc---ggcgcagatcacaagatgggcggttcattgctcaccgttgc 2417 Query: 481 attccagatacttgtcaacagtcagcccaccgctaagctcaccgtggagtcagtagagac 540 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 2418 attccagatacttgccaacagccagcccagtgctaagctcacggtggagtcagtcgagac 2477 Query: 541 cgtgaacaaccttatctcttgcaccatcaacaagatcaagacggcgctgcactgcgatgt 600 ||||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2478 cgtgagcaaccttatctcctgcaccatcaagaagatcaagacggcgctgcattgcgacgt 2537 Query: 601 ctgaac 606 ||||| Sbjct: 2538 gtgaac 2543 Score = 168 bits (85), Expect = 3e-38 Identities = 107/113 (94%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 666 gagtcaagaacgaaccgcgaaat-gcaagtgacctttgctaggtggtaaggaccggacgg 724 |||||||||||||||||||| || | ||| |||||||||||||||| ||||||||||||| Sbjct: 2594 gagtcaagaacgaaccgcgacataggaagggacctttgctaggtggcaaggaccggacgg 2653 Query: 725 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcggcctc 777 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2654 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcagcctc 2706 >dbj|AB101647.1| Oryza sativa (japonica cultivar-group) Roc4 mRNA for GL2-type homeodomain protein, complete cds Length = 2957 Score = 472 bits (238), Expect = e-129 Identities = 514/606 (84%), Gaps = 3/606 (0%) Strand = Plus / Plus Query: 1 cattggggaggatgtgcatgtcgtggcacggaagagtgtggatgaacctggggtgccacc 60 ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| | Sbjct: 1842 cattggggaggatgtgcatgtaatggcgcggaagagtgtggatgaacctggaacgccgnc 1901 Query: 61 aggtgtggtgctgagtgctgccacatcagtttggatgcatgtgatgcccgaacagctctt 120 |||||||||||| |||||||| ||||| || ||||||| ||||||||| |||| |||||| Sbjct: 1902 aggtgtggtgcttagtgctgctacatctgtgtggatgcctgtgatgcctgaacggctctt 1961 Query: 121 caacttcctgcgcaacgaggggctgcgtgctgaatgggacatcctaagcaacggtggccc 180 ||||||| ||| |||| |||||||||||||||||||||| || || ||||| |||||||| Sbjct: 1962 caacttcttgcacaacaaggggctgcgtgctgaatgggatatnctcagcaatggtggccc 2021 Query: 181 tatgcaggaggtgacaaacatcgccaaggggcaacaggatggcaactccgtatctctact 240 ||||||||||||||||| ||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 2022 tatgcaggaggtgacaagcattgccaaggggcaacagaatggcaataccgtatgtctact 2081 Query: 241 gagggccagtccaacgaacaccaaccagaacagcatgctgatcctacaggagacgtgcac 300 || ||| ||||| || || ||| |||||||||||||||||||||||||||||||| | Sbjct: 2082 gaaggctagtcccaccaaagacaagcagaacagcatgctgatcctacaggagacgtgtgc 2141 Query: 301 cgacgcatcttgctcaatggtcgtgtacgccccagtggacatcccagcaatgcaacttgt 360 |||||||| | |||||||| ||||| || || || ||||||||||||||||| ||||| Sbjct: 2142 agacgcatccggttcaatggttgtgtatgctcctgtagacatcccagcaatgcaccttgt 2201 Query: 361 catgggtggaggggactcgacgtatgttgctttattgccatccggttttgtcattctacc 420 |||| |||| ||||| ||| | | || || | | ||||| ||||||| ||| || || Sbjct: 2202 catgagtggtggggattcgtcatgcgtcgcccttcttccatcaggttttgccatcctgcc 2261 Query: 421 tggcgggcctagcatcggtggcgccgggcacaagactggcagctcgttgcttactgttgc 480 || |||||||||||| ||||| | ||||||| ||| | || ||||| || ||||| Sbjct: 2262 tgctgggcctagcatc---ggcgcagatcacaagatgggcggttcattgctcaccgttgc 2318 Query: 481 attccagatacttgtcaacagtcagcccaccgctaagctcaccgtggagtcagtagagac 540 |||||||||||||| |||||| ||||||| ||||||||||| ||||||||||| ||||| Sbjct: 2319 attccagatacttgccaacagccagcccagtgctaagctcacggtggagtcagtcgagac 2378 Query: 541 cgtgaacaaccttatctcttgcaccatcaacaagatcaagacggcgctgcactgcgatgt 600 ||||| |||||||||||| ||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2379 cgtgagcaaccttatctcctgcaccatcaagaagatcaagacggcgctgcattgcgacgt 2438 Query: 601 ctgaac 606 ||||| Sbjct: 2439 gtgaac 2444 Score = 170 bits (86), Expect = 8e-39 Identities = 108/114 (94%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 666 gagtcaagaacgaaccgcgaaat-gcaagtgacctttgctaggtggtaaggaccggacgg 724 |||||||||||||||||||| || | ||| |||||||||||||||| ||||||||||||| Sbjct: 2496 gagtcaagaacgaaccgcgacataggaagggacctttgctaggtggcaaggaccggacgg 2555 Query: 725 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcggcctcc 778 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2556 ggcaggtccttagcacagagcaatggtggtggttcgggtattgactcagcctcc 2609 >ref|NM_001054253.1| Oryza sativa (japonica cultivar-group) Os02g0674800 (Os02g0674800) mRNA, complete cds Length = 3435 Score = 278 bits (140), Expect = 5e-71 Identities = 398/484 (82%) Strand = Plus / Plus Query: 114 agctcttcaacttcctgcgcaacgaggggctgcgtgctgaatgggacatcctaagcaacg 173 |||||||||||||||||||| | ||| ||||||||| || ||||||||||| ||||| | Sbjct: 2379 agctcttcaacttcctgcgcgatgagcagctgcgtgcggagtgggacatcctcagcaatg 2438 Query: 174 gtggccctatgcaggaggtgacaaacatcgccaaggggcaacaggatggcaactccgtat 233 | ||||| ||||||||| |||| | |||||||||||||| | |||||| ||||| || | Sbjct: 2439 gaggccccatgcaggagatgacccagatcgccaaggggcagcgggatgggaactcggttt 2498 Query: 234 ctctactgagggccagtccaacgaacaccaaccagaacagcatgctgatcctacaggaga 293 | || || ||||||||| | || ||||||||| |||||||||||| || ||||||| Sbjct: 2499 cactcctcagggccagtgctgtgagtgccaaccagagcagcatgctgatacttcaggaga 2558 Query: 294 cgtgcaccgacgcatcttgctcaatggtcgtgtacgccccagtggacatcccagcaatgc 353 ||||||||||||| ||| |||| || || |||||||| || || |||||||| ||||||| Sbjct: 2559 cgtgcaccgacgcttctggctccattgttgtgtacgctccggtagacatcccggcaatgc 2618 Query: 354 aacttgtcatgggtggaggggactcgacgtatgttgctttattgccatccggttttgtca 413 | ||||||||| ||| || ||||| || ||||||||| | | |||||||| || | || Sbjct: 2619 agcttgtcatgaatggtggcgactccacctatgttgctctgcttccatccggattcgcca 2678 Query: 414 ttctacctggcgggcctagcatcggtggcgccgggcacaagactggcagctcgttgctta 473 | || || | |||||| ||||||| | | ||||| || |||| ||| |||| |||| | Sbjct: 2679 tcctgcccgatgggcctcgcatcggcgccaccgggtacgagacgggcggctctctgctca 2738 Query: 474 ctgttgcattccagatacttgtcaacagtcagcccaccgctaagctcaccgtggagtcag 533 | || || |||||||| |||||||||| ||||||||||| |||||||||||||| || | Sbjct: 2739 ccgtggcgttccagattcttgtcaacaaccagcccaccgccaagctcaccgtggaatcgg 2798 Query: 534 tagagaccgtgaacaaccttatctcttgcaccatcaacaagatcaagacggcgctgcact 593 | |||||||||||||| || ||||| ||||||||||| |||||||||||||||||||| | Sbjct: 2799 tcgagaccgtgaacaatctcatctcctgcaccatcaagaagatcaagacggcgctgcagt 2858 Query: 594 gcga 597 |||| Sbjct: 2859 gcga 2862 Score = 87.7 bits (44), Expect = 9e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 696 acctttgctaggtggtaaggaccggacggggcaggtccttagcacagagcaatggtggtg 755 |||||||||||||| |||||| | | ||| ||||||||||||||||||||||||||| Sbjct: 2958 acctttgctaggtgataaggatcttgcttggccggtccttagcacagagcaatggtggtg 3017 Query: 756 gttcgggtattgactc 771 |||||||||||||||| Sbjct: 3018 gttcgggtattgactc 3033