BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem114d11 (1045 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001054439.1| Oryza sativa (japonica cultivar-group) Os02g... 317 5e-83 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 317 5e-83 dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 317 5e-83 ref|NM_001064242.1| Oryza sativa (japonica cultivar-group) Os06g... 186 1e-43 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 186 1e-43 >ref|NM_001054439.1| Oryza sativa (japonica cultivar-group) Os02g0711900 (Os02g0711900) mRNA, complete cds Length = 750 Score = 317 bits (160), Expect = 5e-83 Identities = 198/210 (94%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 618 tcggcgccgcaggggtacttccggtacacgccgtcgccgctgcagaggtgggaggcg--- 674 |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 541 tcggcgccgccggggtacttccggtacacgccgtcgccgctgccgaggtgggaggcggcg 600 Query: 675 acgccgaggcggcacgagtacttctccggtgagtaccgctacagctacccgacgcccgtg 734 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 601 acgccgaggcggcacgagtacttctccggcgagtaccgctacagctacccgacgccggtg 660 Query: 735 cgcgagggcatctacagcatcgccaccgacgccaacaggctcaccaccatcttcagcgag 794 |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 661 cgcgaggggatctaccgcatggccaccgacgccaacaggctcaccaccatcttcagcgag 720 Query: 795 gagaatcccaacgcctgcgcgatcgtgtga 824 ||||| |||||||||||||||||| ||||| Sbjct: 721 gagaaccccaacgcctgcgcgatcatgtga 750 Score = 147 bits (74), Expect = 1e-31 Identities = 166/196 (84%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 135 atgggttgctacccccttggcaagatcgtgtcgaaagcgctaggaaaatgcaacggacgc 194 ||||||||||| | || |||||| ||||||||||||| || |||||||||||||| ||| Sbjct: 1 atgggttgctatcatctgggcaagttcgtgtcgaaagctctcggaaaatgcaacgggcgc 60 Query: 195 gaacgacgg---cgggaagagaggatggactacgccatggcctaccagcccggcccaccc 251 || | || ||||| |||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 61 gagagggggtggcgggaggagaggctggactacgccatggcctacccgcccggcccaccc 120 Query: 252 acagagacacactgcatgcgtccggtggcgcgcacggtaaccttcagcagcaccaactcc 311 || ||||| ||| |||||| ||||||||||||||||| ||||||||| | |||||||| Sbjct: 121 acggagacgtactacatgcggccggtggcgcgcacggtcaccttcagcgccgccaactcc 180 Query: 312 atgcacgtgatcccgc 327 | |||||||||||| Sbjct: 181 gtctacgtgatcccgc 196 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 449 cgcgccaccggccgaactgaaacagccgaaacgaggcaaaaacaagcagccaggccgcgt 508 ||||||||||||||| | ||| | |||||| || ||||| |||||| || | |||||||| Sbjct: 342 cgcgccaccggccgagccgaagccgccgaagcgtggcaagaacaagaagtctggccgcgt 401 Query: 509 ccggttcggccccgagccaccaccaccgcaacagcaacagcagca 553 |||||||||||||||||| || |||||| | ||||| |||||||| Sbjct: 402 ccggttcggccccgagccgccgccaccggagcagcagcagcagca 446 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 317 bits (160), Expect = 5e-83 Identities = 198/210 (94%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 618 tcggcgccgcaggggtacttccggtacacgccgtcgccgctgcagaggtgggaggcg--- 674 |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 29500168 tcggcgccgccggggtacttccggtacacgccgtcgccgctgccgaggtgggaggcggcg 29500109 Query: 675 acgccgaggcggcacgagtacttctccggtgagtaccgctacagctacccgacgcccgtg 734 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 29500108 acgccgaggcggcacgagtacttctccggcgagtaccgctacagctacccgacgccggtg 29500049 Query: 735 cgcgagggcatctacagcatcgccaccgacgccaacaggctcaccaccatcttcagcgag 794 |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 29500048 cgcgaggggatctaccgcatggccaccgacgccaacaggctcaccaccatcttcagcgag 29499989 Query: 795 gagaatcccaacgcctgcgcgatcgtgtga 824 ||||| |||||||||||||||||| ||||| Sbjct: 29499988 gagaaccccaacgcctgcgcgatcatgtga 29499959 Score = 131 bits (66), Expect = 6e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 202 ggcgggaagagaggatggactacgccatggcctaccagcccggcccacccacagagacac 261 ||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 29500638 ggcgggaggagaggctggactacgccatggcctacccgcccggcccacccacggagacgt 29500579 Query: 262 actgcatgcgtccggtggcgcgcacggtaaccttcagcagcaccaactccatgcacgtga 321 ||| |||||| ||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 29500578 actacatgcggccggtggcgcgcacggtcaccttcagcgccgccaactccgtctacgtga 29500519 Query: 322 tcccgc 327 |||||| Sbjct: 29500518 tcccgc 29500513 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 449 cgcgccaccggccgaactgaaacagccgaaacgaggcaaaaacaagcagccaggccgcgt 508 ||||||||||||||| | ||| | |||||| || ||||| |||||| || | |||||||| Sbjct: 29500367 cgcgccaccggccgagccgaagccgccgaagcgtggcaagaacaagaagtctggccgcgt 29500308 Query: 509 ccggttcggccccgagccaccaccaccgcaacagcaacagcagca 553 |||||||||||||||||| || |||||| | ||||| |||||||| Sbjct: 29500307 ccggttcggccccgagccgccgccaccggagcagcagcagcagca 29500263 >dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 317 bits (160), Expect = 5e-83 Identities = 198/210 (94%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 618 tcggcgccgcaggggtacttccggtacacgccgtcgccgctgcagaggtgggaggcg--- 674 |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95198 tcggcgccgccggggtacttccggtacacgccgtcgccgctgccgaggtgggaggcggcg 95139 Query: 675 acgccgaggcggcacgagtacttctccggtgagtaccgctacagctacccgacgcccgtg 734 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 95138 acgccgaggcggcacgagtacttctccggcgagtaccgctacagctacccgacgccggtg 95079 Query: 735 cgcgagggcatctacagcatcgccaccgacgccaacaggctcaccaccatcttcagcgag 794 |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95078 cgcgaggggatctaccgcatggccaccgacgccaacaggctcaccaccatcttcagcgag 95019 Query: 795 gagaatcccaacgcctgcgcgatcgtgtga 824 ||||| |||||||||||||||||| ||||| Sbjct: 95018 gagaaccccaacgcctgcgcgatcatgtga 94989 Score = 131 bits (66), Expect = 6e-27 Identities = 111/126 (88%) Strand = Plus / Minus Query: 202 ggcgggaagagaggatggactacgccatggcctaccagcccggcccacccacagagacac 261 ||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 95668 ggcgggaggagaggctggactacgccatggcctacccgcccggcccacccacggagacgt 95609 Query: 262 actgcatgcgtccggtggcgcgcacggtaaccttcagcagcaccaactccatgcacgtga 321 ||| |||||| ||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 95608 actacatgcggccggtggcgcgcacggtcaccttcagcgccgccaactccgtctacgtga 95549 Query: 322 tcccgc 327 |||||| Sbjct: 95548 tcccgc 95543 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 449 cgcgccaccggccgaactgaaacagccgaaacgaggcaaaaacaagcagccaggccgcgt 508 ||||||||||||||| | ||| | |||||| || ||||| |||||| || | |||||||| Sbjct: 95397 cgcgccaccggccgagccgaagccgccgaagcgtggcaagaacaagaagtctggccgcgt 95338 Query: 509 ccggttcggccccgagccaccaccaccgcaacagcaacagcagca 553 |||||||||||||||||| || |||||| | ||||| |||||||| Sbjct: 95337 ccggttcggccccgagccgccgccaccggagcagcagcagcagca 95293 >ref|NM_001064242.1| Oryza sativa (japonica cultivar-group) Os06g0500300 (Os06g0500300) mRNA, complete cds Length = 912 Score = 186 bits (94), Expect = 1e-43 Identities = 133/146 (91%) Strand = Plus / Plus Query: 675 acgccgaggcggcacgagtacttctccggtgagtaccgctacagctacccgacgcccgtg 734 |||||| |||||||||||||||||||||| |||||||| | ||||||||||||| ||| Sbjct: 763 acgccgcggcggcacgagtacttctccggcgagtaccggtggtgctacccgacgccggtg 822 Query: 735 cgcgagggcatctacagcatcgccaccgacgccaacaggctcaccaccatcttcagcgag 794 |||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||| Sbjct: 823 cgcgagggcatctacagcctcgccacggacgccaaccgcctcaccaccatcttcagcgag 882 Query: 795 gagaatcccaacgcctgcgcgatcgt 820 ||||||||||||||||| || ||||| Sbjct: 883 gagaatcccaacgcctgtgccatcgt 908 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 186 bits (94), Expect = 1e-43 Identities = 133/146 (91%) Strand = Plus / Minus Query: 675 acgccgaggcggcacgagtacttctccggtgagtaccgctacagctacccgacgcccgtg 734 |||||| |||||||||||||||||||||| |||||||| | ||||||||||||| ||| Sbjct: 17399684 acgccgcggcggcacgagtacttctccggcgagtaccggtggtgctacccgacgccggtg 17399625 Query: 735 cgcgagggcatctacagcatcgccaccgacgccaacaggctcaccaccatcttcagcgag 794 |||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||| Sbjct: 17399624 cgcgagggcatctacagcctcgccacggacgccaaccgcctcaccaccatcttcagcgag 17399565 Query: 795 gagaatcccaacgcctgcgcgatcgt 820 ||||||||||||||||| || ||||| Sbjct: 17399564 gagaatcccaacgcctgtgccatcgt 17399539