BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem114d06 (1312 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 323 1e-84 emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 323 1e-84 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 307 6e-80 emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 307 6e-80 ref|NM_001072082.1| Oryza sativa (japonica cultivar-group) Os11g... 295 2e-76 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 323 bits (163), Expect = 1e-84 Identities = 322/375 (85%) Strand = Plus / Plus Query: 668 acctgtgtcaagatgcttaggactttgctgggcacaagggtcagatcttctgcggggtct 727 |||||||||||| | |||||||||||| ||||||||||| ||||| || || || || | Sbjct: 422336 acctgtgtcaagttcattaggactttgcggggcacaagggccagatattttgtggagttt 422395 Query: 728 ttgatgggcatggccccctcggccgggaagtttctcgccatgtccgcgacgcccttccga 787 |||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| Sbjct: 422396 ttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccag 422455 Query: 788 caaaactatcatcctctttgacactcaaaactgaagaagatccctcaagcaatgcggatt 847 |||||||| ||||||||| |||| || |||||| ||||||| || ||||| | ||| Sbjct: 422456 tgaaactatcctcctctttggcactgaagactgaacaagatccatccagcaacacagata 422515 Query: 848 tggattcctttgacaagtccgattgcacctcatttagtgatacaagcgatgaaaaccagc 907 ||| |||| || ||||| |||||||||||||| || ||||||||| |||| || || Sbjct: 422516 aggaaaccttggaaaagtcagattgcacctcattgagcgatacaagcaatgagaagcaat 422575 Query: 908 tgttatcctcatggaagagcataattgtgaagacatttgaggatgtggatgaggagctga 967 |||||||| | ||||||| |||| |||| ||||||||||||||||| |||||||| |||| Sbjct: 422576 tgttatccacctggaagaacatatttgtcaagacatttgaggatgttgatgaggatctga 422635 Query: 968 ggcaacattctggaattgactgcatttgtagtggcacaacagctgtcactgttgttaggc 1027 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 422636 ggcaacattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgttaggc 422695 Query: 1028 aggtactagtactac 1042 |||||||||| |||| Sbjct: 422696 aggtactagtgctac 422710 Score = 153 bits (77), Expect = 2e-33 Identities = 147/168 (87%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 34 caatggggatctgctgcagca--gggcag-acgagcttgaggtcgaggggttcccatgga 90 |||||||||| |||||||||| ||| || | |||||||||| ||||| || ||||||| Sbjct: 421457 caatggggatatgctgcagcaaggggaaggaggagcttgaggaggagggatttccatgga 421516 Query: 91 agcacgatgacttcttccacgagcagcttaggagcgctggggtctccatgtacaccaagc 150 ||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 421517 agcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagc 421576 Query: 151 aaggatggaagggtgtcaaccaggacgccatgaccacatgccaggtaa 198 |||| |||||||| | |||||||||||||||||| || |||||||||| Sbjct: 421577 aaggctggaagggcgccaaccaggacgccatgactacctgccaggtaa 421624 Score = 131 bits (66), Expect = 8e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 937 aagacatttgaggatgtggatgaggagctgaggcaacattctggaattgactgcatttgt 996 |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 433324 aagacatttgaggatgtggacgaggagctgaggcaacattcttgaattggttgcatttgt 433383 Query: 997 agtggcacaacagctgtcactgttgttaggcaggtactagtactac 1042 ||||||||||| ||||||||||| |||| || ||| ||||||||| Sbjct: 433384 agtggcacaaccgctgtcactgtcgttacacatgtattagtactac 433429 Score = 109 bits (55), Expect = 3e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 1227 ttcccaaatattgttcttatgcatagggtgatcacttgatcattgccaatttgggcgatt 1286 |||||||||| | |||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 422908 ttcccaaatactattcttatgcacagggtgatcacctgatcattgcaaatttgggcgatt 422967 Query: 1287 cacgtgctg-tctttgcacccgagaca 1312 ||||||| | ||||||||||||||||| Sbjct: 422968 cacgtgcggttctttgcacccgagaca 422994 >emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 323 bits (163), Expect = 1e-84 Identities = 322/375 (85%) Strand = Plus / Plus Query: 668 acctgtgtcaagatgcttaggactttgctgggcacaagggtcagatcttctgcggggtct 727 |||||||||||| | |||||||||||| ||||||||||| ||||| || || || || | Sbjct: 129654 acctgtgtcaagttcattaggactttgcggggcacaagggccagatattttgtggagttt 129713 Query: 728 ttgatgggcatggccccctcggccgggaagtttctcgccatgtccgcgacgcccttccga 787 |||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| Sbjct: 129714 ttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccag 129773 Query: 788 caaaactatcatcctctttgacactcaaaactgaagaagatccctcaagcaatgcggatt 847 |||||||| ||||||||| |||| || |||||| ||||||| || ||||| | ||| Sbjct: 129774 tgaaactatcctcctctttggcactgaagactgaacaagatccatccagcaacacagata 129833 Query: 848 tggattcctttgacaagtccgattgcacctcatttagtgatacaagcgatgaaaaccagc 907 ||| |||| || ||||| |||||||||||||| || ||||||||| |||| || || Sbjct: 129834 aggaaaccttggaaaagtcagattgcacctcattgagcgatacaagcaatgagaagcaat 129893 Query: 908 tgttatcctcatggaagagcataattgtgaagacatttgaggatgtggatgaggagctga 967 |||||||| | ||||||| |||| |||| ||||||||||||||||| |||||||| |||| Sbjct: 129894 tgttatccacctggaagaacatatttgtcaagacatttgaggatgttgatgaggatctga 129953 Query: 968 ggcaacattctggaattgactgcatttgtagtggcacaacagctgtcactgttgttaggc 1027 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 129954 ggcaacattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgttaggc 130013 Query: 1028 aggtactagtactac 1042 |||||||||| |||| Sbjct: 130014 aggtactagtgctac 130028 Score = 153 bits (77), Expect = 2e-33 Identities = 147/168 (87%), Gaps = 3/168 (1%) Strand = Plus / Plus Query: 34 caatggggatctgctgcagca--gggcag-acgagcttgaggtcgaggggttcccatgga 90 |||||||||| |||||||||| ||| || | |||||||||| ||||| || ||||||| Sbjct: 128775 caatggggatatgctgcagcaaggggaaggaggagcttgaggaggagggatttccatgga 128834 Query: 91 agcacgatgacttcttccacgagcagcttaggagcgctggggtctccatgtacaccaagc 150 ||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 128835 agcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagc 128894 Query: 151 aaggatggaagggtgtcaaccaggacgccatgaccacatgccaggtaa 198 |||| |||||||| | |||||||||||||||||| || |||||||||| Sbjct: 128895 aaggctggaagggcgccaaccaggacgccatgactacctgccaggtaa 128942 Score = 131 bits (66), Expect = 8e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 937 aagacatttgaggatgtggatgaggagctgaggcaacattctggaattgactgcatttgt 996 |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| Sbjct: 140642 aagacatttgaggatgtggacgaggagctgaggcaacattcttgaattggttgcatttgt 140701 Query: 997 agtggcacaacagctgtcactgttgttaggcaggtactagtactac 1042 ||||||||||| ||||||||||| |||| || ||| ||||||||| Sbjct: 140702 agtggcacaaccgctgtcactgtcgttacacatgtattagtactac 140747 Score = 109 bits (55), Expect = 3e-20 Identities = 80/87 (91%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 1227 ttcccaaatattgttcttatgcatagggtgatcacttgatcattgccaatttgggcgatt 1286 |||||||||| | |||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct: 130226 ttcccaaatactattcttatgcacagggtgatcacctgatcattgcaaatttgggcgatt 130285 Query: 1287 cacgtgctg-tctttgcacccgagaca 1312 ||||||| | ||||||||||||||||| Sbjct: 130286 cacgtgcggttctttgcacccgagaca 130312 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 307 bits (155), Expect = 6e-80 Identities = 320/375 (85%) Strand = Plus / Plus Query: 668 acctgtgtcaagatgcttaggactttgctgggcacaagggtcagatcttctgcggggtct 727 |||||||||||| | |||||||||||| ||||||||||| ||||| || || || || | Sbjct: 469425 acctgtgtcaagtttattaggactttgcggggcacaagggccagatattttgtggagttt 469484 Query: 728 ttgatgggcatggccccctcggccgggaagtttctcgccatgtccgcgacgcccttccga 787 |||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| | Sbjct: 469485 ttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccaa 469544 Query: 788 caaaactatcatcctctttgacactcaaaactgaagaagatccctcaagcaatgcggatt 847 |||||||| ||||||||| |||| ||||||||| ||||||| || ||||| | ||| Sbjct: 469545 tgaaactatcctcctctttggcactgaaaactgaacaagatccatccagcaacacagata 469604 Query: 848 tggattcctttgacaagtccgattgcacctcatttagtgatacaagcgatgaaaaccagc 907 ||| |||| || || || |||||||||||||| || ||||||||| |||| || || Sbjct: 469605 aggaagccttggaaaaatcagattgcacctcattgagcgatacaagcaatgagaagcaat 469664 Query: 908 tgttatcctcatggaagagcataattgtgaagacatttgaggatgtggatgaggagctga 967 |||||||| | ||||||| |||| |||| ||||||||||||||||| ||||| || |||| Sbjct: 469665 tgttatccacctggaagaacatatttgtcaagacatttgaggatgtagatgatgatctga 469724 Query: 968 ggcaacattctggaattgactgcatttgtagtggcacaacagctgtcactgttgttaggc 1027 | ||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 469725 gacaaaattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgtcaggc 469784 Query: 1028 aggtactagtactac 1042 ||||||||||||||| Sbjct: 469785 aggtactagtactac 469799 Score = 135 bits (68), Expect = 5e-28 Identities = 146/171 (85%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 871 tgcacctcatttagtgatacaagcgatgaaaaccagctgttatcctcatggaagagcata 930 ||||||||||| ||||||||||||||||| || || |||||||| | || |||| ||| Sbjct: 486782 tgcacctcattcagtgatacaagcgatgagaagcaattgttatccacctgaaagaacatg 486841 Query: 931 attgtgaagacatttgaggatgtggatgaggagctgaggcaacattctggaattgactgc 990 ||| ||||||||||| |||||| ||||||||||||||||||||| |||||| ||| Sbjct: 486842 tatgtc--gacatttgagggtgtggacgaggagctgaggcaacattcttgaattggttgc 486899 Query: 991 atttgtagtggcacaacagctgtcactgttgttaggcaggtactagtacta 1041 ||||||||||||||||| ||||||||||| |||| |||||| |||||||| Sbjct: 486900 atttgtagtggcacaaccgctgtcactgtcgttacacaggtattagtacta 486950 Score = 133 bits (67), Expect = 2e-27 Identities = 145/168 (86%), Gaps = 6/168 (3%) Strand = Plus / Plus Query: 34 caatggggatctgctgcagca--gggcag-acgagcttgaggtcgaggggttcccatgga 90 ||||||||||||||||||||| ||| || | |||||||||| |||| || ||||||| Sbjct: 468547 caatggggatctgctgcagcaaggggaaggaggagcttgagg---agggatttccatgga 468603 Query: 91 agcacgatgacttcttccacgagcagcttaggagcgctggggtctccatgtacaccaagc 150 ||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 468604 agcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagc 468663 Query: 151 aaggatggaagggtgtcaaccaggacgccatgaccacatgccaggtaa 198 |||| |||||||| | |||||||| |||||||| || |||||||||| Sbjct: 468664 aaggctggaagggcgctaaccaggatgccatgactacctgccaggtaa 468711 Score = 91.7 bits (46), Expect = 7e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1238 tgttcttatgcatagggtgatcacttgatcattgccaatttgggcgattcacgtgctg-t 1296 ||||||||| || ||||||||||| |||||||||| |||||||||||||||||||| | | Sbjct: 470008 tgttcttatacacagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggtt 470067 Query: 1297 ctttgcacccgaga 1310 |||||||||||||| Sbjct: 470068 ctttgcacccgaga 470081 >emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 307 bits (155), Expect = 6e-80 Identities = 320/375 (85%) Strand = Plus / Minus Query: 668 acctgtgtcaagatgcttaggactttgctgggcacaagggtcagatcttctgcggggtct 727 |||||||||||| | |||||||||||| ||||||||||| ||||| || || || || | Sbjct: 77347 acctgtgtcaagtttattaggactttgcggggcacaagggccagatattttgtggagttt 77288 Query: 728 ttgatgggcatggccccctcggccgggaagtttctcgccatgtccgcgacgcccttccga 787 |||||||||||||||| ||||| |||||||| |||||||||||||||||| |||||| | Sbjct: 77287 ttgatgggcatggccctctcggaagggaagttgctcgccatgtccgcgacgtccttccaa 77228 Query: 788 caaaactatcatcctctttgacactcaaaactgaagaagatccctcaagcaatgcggatt 847 |||||||| ||||||||| |||| ||||||||| ||||||| || ||||| | ||| Sbjct: 77227 tgaaactatcctcctctttggcactgaaaactgaacaagatccatccagcaacacagata 77168 Query: 848 tggattcctttgacaagtccgattgcacctcatttagtgatacaagcgatgaaaaccagc 907 ||| |||| || || || |||||||||||||| || ||||||||| |||| || || Sbjct: 77167 aggaagccttggaaaaatcagattgcacctcattgagcgatacaagcaatgagaagcaat 77108 Query: 908 tgttatcctcatggaagagcataattgtgaagacatttgaggatgtggatgaggagctga 967 |||||||| | ||||||| |||| |||| ||||||||||||||||| ||||| || |||| Sbjct: 77107 tgttatccacctggaagaacatatttgtcaagacatttgaggatgtagatgatgatctga 77048 Query: 968 ggcaacattctggaattgactgcatttgtagtggcacaacagctgtcactgttgttaggc 1027 | ||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||| Sbjct: 77047 gacaaaattctggaattgactgcatttgtagtggcacaactgctgtcactgtcgtcaggc 76988 Query: 1028 aggtactagtactac 1042 ||||||||||||||| Sbjct: 76987 aggtactagtactac 76973 Score = 135 bits (68), Expect = 5e-28 Identities = 146/171 (85%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 871 tgcacctcatttagtgatacaagcgatgaaaaccagctgttatcctcatggaagagcata 930 ||||||||||| ||||||||||||||||| || || |||||||| | || |||| ||| Sbjct: 59990 tgcacctcattcagtgatacaagcgatgagaagcaattgttatccacctgaaagaacatg 59931 Query: 931 attgtgaagacatttgaggatgtggatgaggagctgaggcaacattctggaattgactgc 990 ||| ||||||||||| |||||| ||||||||||||||||||||| |||||| ||| Sbjct: 59930 tatgtc--gacatttgagggtgtggacgaggagctgaggcaacattcttgaattggttgc 59873 Query: 991 atttgtagtggcacaacagctgtcactgttgttaggcaggtactagtacta 1041 ||||||||||||||||| ||||||||||| |||| |||||| |||||||| Sbjct: 59872 atttgtagtggcacaaccgctgtcactgtcgttacacaggtattagtacta 59822 Score = 133 bits (67), Expect = 2e-27 Identities = 145/168 (86%), Gaps = 6/168 (3%) Strand = Plus / Minus Query: 34 caatggggatctgctgcagca--gggcag-acgagcttgaggtcgaggggttcccatgga 90 ||||||||||||||||||||| ||| || | |||||||||| |||| || ||||||| Sbjct: 78225 caatggggatctgctgcagcaaggggaaggaggagcttgagg---agggatttccatgga 78169 Query: 91 agcacgatgacttcttccacgagcagcttaggagcgctggggtctccatgtacaccaagc 150 ||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 78168 agcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagc 78109 Query: 151 aaggatggaagggtgtcaaccaggacgccatgaccacatgccaggtaa 198 |||| |||||||| | |||||||| |||||||| || |||||||||| Sbjct: 78108 aaggctggaagggcgctaaccaggatgccatgactacctgccaggtaa 78061 Score = 91.7 bits (46), Expect = 7e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 1238 tgttcttatgcatagggtgatcacttgatcattgccaatttgggcgattcacgtgctg-t 1296 ||||||||| || ||||||||||| |||||||||| |||||||||||||||||||| | | Sbjct: 76764 tgttcttatacacagggtgatcacctgatcattgcaaatttgggcgattcacgtgcggtt 76705 Query: 1297 ctttgcacccgaga 1310 |||||||||||||| Sbjct: 76704 ctttgcacccgaga 76691 >ref|NM_001072082.1| Oryza sativa (japonica cultivar-group) Os11g0109000 (Os11g0109000) mRNA, complete cds Length = 1701 Score = 295 bits (149), Expect = 2e-76 Identities = 296/345 (85%) Strand = Plus / Plus Query: 686 aggactttgctgggcacaagggtcagatcttctgcggggtctttgatgggcatggccccc 745 |||||||||| ||||||||||| ||||| || || || || ||||||||||||||||| | Sbjct: 342 aggactttgcggggcacaagggccagatattttgtggagtttttgatgggcatggccctc 401 Query: 746 tcggccgggaagtttctcgccatgtccgcgacgcccttccgacaaaactatcatcctctt 805 |||| |||||||| |||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 402 tcggaagggaagttgctcgccatgtccgcgacgtccttccagtgaaactatcctcctctt 461 Query: 806 tgacactcaaaactgaagaagatccctcaagcaatgcggatttggattcctttgacaagt 865 || |||| || |||||| ||||||| || ||||| | ||| ||| |||| || |||| Sbjct: 462 tggcactgaagactgaacaagatccatccagcaacacagataaggaaaccttggaaaagt 521 Query: 866 ccgattgcacctcatttagtgatacaagcgatgaaaaccagctgttatcctcatggaaga 925 | |||||||||||||| || ||||||||| |||| || || |||||||| | ||||||| Sbjct: 522 cagattgcacctcattgagcgatacaagcaatgagaagcaattgttatccacctggaaga 581 Query: 926 gcataattgtgaagacatttgaggatgtggatgaggagctgaggcaacattctggaattg 985 |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 582 acatatttgtcaagacatttgaggatgttgatgaggatctgaggcaacattctggaattg 641 Query: 986 actgcatttgtagtggcacaacagctgtcactgttgttaggcagg 1030 |||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 642 actgcatttgtagtggcacaactgctgtcactgtcgttaggcagg 686 Score = 147 bits (74), Expect = 1e-31 Identities = 144/165 (87%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 34 caatggggatctgctgcagca--gggcag-acgagcttgaggtcgaggggttcccatgga 90 |||||||||| |||||||||| ||| || | |||||||||| ||||| || ||||||| Sbjct: 180 caatggggatatgctgcagcaaggggaaggaggagcttgaggaggagggatttccatgga 239 Query: 91 agcacgatgacttcttccacgagcagcttaggagcgctggggtctccatgtacaccaagc 150 ||||||| | |||||||||||| |||||| |||||||||| ||||||||| ||||||||| Sbjct: 240 agcacgacgccttcttccacgaccagctttggagcgctggcgtctccatgcacaccaagc 299 Query: 151 aaggatggaagggtgtcaaccaggacgccatgaccacatgccagg 195 |||| |||||||| | |||||||||||||||||| || ||||||| Sbjct: 300 aaggctggaagggcgccaaccaggacgccatgactacctgccagg 344 Score = 85.7 bits (43), Expect = 4e-13 Identities = 59/63 (93%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 1251 agggtgatcacttgatcattgccaatttgggcgattcacgtgctg-tctttgcacccgag 1309 ||||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||| Sbjct: 684 agggtgatcacctgatcattgcaaatttgggcgattcacgtgcggttctttgcacccgag 743 Query: 1310 aca 1312 ||| Sbjct: 744 aca 746