BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem114a02 (1011 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY105945.1| Zea mays PCO115682 mRNA sequence 295 2e-76 ref|NM_001060593.1| Oryza sativa (japonica cultivar-group) Os04g... 272 3e-69 emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 272 3e-69 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 272 3e-69 dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 3e-69 >gb|AY105945.1| Zea mays PCO115682 mRNA sequence Length = 947 Score = 295 bits (149), Expect = 2e-76 Identities = 224/249 (89%) Strand = Plus / Plus Query: 498 cgccgtactccgacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcc 557 |||||| ||| |||| |||||||||||||||||||||||||||||| ||||||||| | | Sbjct: 391 cgccgtcctcggacaagtgccccatcgacgcgctcaagctcggcgcctgcgtggacgttc 450 Query: 558 tcggcaacgaggtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcg 617 |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 451 tcgggaacgaggtgcacgtcggcgacgccaacgtccagtgctgcccgctcgtgaagggca 510 Query: 618 tcgccggtttgtctgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacc 677 ||||||| | || ||||| |||||||| |||||| |||||||||||||| |||||||| Sbjct: 511 tcgccgggctctccgcggcggcgtgcctttgcaccgccatcaaggccaaggtgctcgaca 570 Query: 678 tctccgtatacgtgccgatcgcgctcacgctgctcgtcaactgcggctgcgccgtcccgc 737 ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||| Sbjct: 571 tctccgtctacgtgcccatcgcgctcgaggtgctcgtcaactgcggctgcgccgtcccgc 630 Query: 738 cgggctaca 746 | ||||||| Sbjct: 631 caggctaca 639 Score = 107 bits (54), Expect = 9e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 51 cagcaatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcct 110 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 31 cagcaatggagtccaccaagctctccgcgctgctggtgctcgccatgctcgcgctctcct 90 Query: 111 cctctcctctcgcccttgcgtg 132 | || || ||||| || ||||| Sbjct: 91 cgtccccgctcgctctcgcgtg 112 >ref|NM_001060593.1| Oryza sativa (japonica cultivar-group) Os04g0644400 (Os04g0644400) mRNA, complete cds Length = 1270 Score = 272 bits (137), Expect = 3e-69 Identities = 218/245 (88%) Strand = Plus / Plus Query: 509 gacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaacgag 568 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 688 gacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaacgag 747 Query: 569 gtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccggtttg 628 |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| || Sbjct: 748 gtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccggcctg 807 Query: 629 tctgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctctccgtatac 688 || || ||||| ||||| |||||| |||||||||||||| |||||||| || | | ||| Sbjct: 808 tccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcatctac 867 Query: 689 gtgccgatcgcgctcacgctgctcgtcaactgcggctgcgccgtcccgccgggctacacc 748 | || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 868 atccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggctacacc 927 Query: 749 tgcgc 753 ||||| Sbjct: 928 tgcgc 932 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 54 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 113 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 62 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 121 Query: 114 ctcctctcgcccttgcgtgcaactcgtgc 142 | || |||||||| |||||| ||||||| Sbjct: 122 ccccgctcgccctcgcgtgcggctcgtgc 150 >emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 272 bits (137), Expect = 3e-69 Identities = 218/245 (88%) Strand = Plus / Minus Query: 509 gacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaacgag 568 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 22619 gacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaacgag 22560 Query: 569 gtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccggtttg 628 |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| || Sbjct: 22559 gtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccggcctg 22500 Query: 629 tctgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctctccgtatac 688 || || ||||| ||||| |||||| |||||||||||||| |||||||| || | | ||| Sbjct: 22499 tccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcatctac 22440 Query: 689 gtgccgatcgcgctcacgctgctcgtcaactgcggctgcgccgtcccgccgggctacacc 748 | || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 22439 atccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggctacacc 22380 Query: 749 tgcgc 753 ||||| Sbjct: 22379 tgcgc 22375 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 54 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 113 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 23245 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 23186 Query: 114 ctcctctcgcccttgcgtgcaactcgtgc 142 | || |||||||| |||||| ||||||| Sbjct: 23185 ccccgctcgccctcgcgtgcggctcgtgc 23157 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 272 bits (137), Expect = 3e-69 Identities = 218/245 (88%) Strand = Plus / Minus Query: 509 gacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaacgag 568 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 32827384 gacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaacgag 32827325 Query: 569 gtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccggtttg 628 |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| || Sbjct: 32827324 gtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccggcctg 32827265 Query: 629 tctgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctctccgtatac 688 || || ||||| ||||| |||||| |||||||||||||| |||||||| || | | ||| Sbjct: 32827264 tccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcatctac 32827205 Query: 689 gtgccgatcgcgctcacgctgctcgtcaactgcggctgcgccgtcccgccgggctacacc 748 | || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 32827204 atccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggctacacc 32827145 Query: 749 tgcgc 753 ||||| Sbjct: 32827144 tgcgc 32827140 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 54 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 113 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 32828010 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 32827951 Query: 114 ctcctctcgcccttgcgtgcaactcgtgc 142 | || |||||||| |||||| ||||||| Sbjct: 32827950 ccccgctcgccctcgcgtgcggctcgtgc 32827922 >dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 272 bits (137), Expect = 3e-69 Identities = 218/245 (88%) Strand = Plus / Plus Query: 509 gacacgtgccccatcgacgcgctcaagctcggcgcgtgcgtggacctcctcggcaacgag 568 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 685 gacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcggcaacgag 744 Query: 569 gtgcacatcggcgacgccaacgtgcagtgctgcccgctcgtgaagggcgtcgccggtttg 628 |||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||| || Sbjct: 745 gtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcgccggcctg 804 Query: 629 tctgcggccgcgtgcctgtgcaccaccatcaaggccaagctgctcgacctctccgtatac 688 || || ||||| ||||| |||||| |||||||||||||| |||||||| || | | ||| Sbjct: 805 tccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatcagcatctac 864 Query: 689 gtgccgatcgcgctcacgctgctcgtcaactgcggctgcgccgtcccgccgggctacacc 748 | || |||||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct: 865 atccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctggctacacc 924 Query: 749 tgcgc 753 ||||| Sbjct: 925 tgcgc 929 Score = 89.7 bits (45), Expect = 2e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 54 caatggagtccaccaagctctccgcgctgcttgttctcgccatgctcgcgctctcctcct 113 ||||||||||||||||| |||| ||| |||| | ||||||||||||||||||||||||| Sbjct: 59 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 118 Query: 114 ctcctctcgcccttgcgtgcaactcgtgc 142 | || |||||||| |||||| ||||||| Sbjct: 119 ccccgctcgccctcgcgtgcggctcgtgc 147