BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem113n12 (813 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059970.1| Oryza sativa (japonica cultivar-group) Os04g... 557 e-155 dbj|AK105343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 557 e-155 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 373 e-100 emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4,... 373 e-100 emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4,... 373 e-100 >ref|NM_001059970.1| Oryza sativa (japonica cultivar-group) Os04g0539000 (Os04g0539000) mRNA, complete cds Length = 1067 Score = 557 bits (281), Expect = e-155 Identities = 395/433 (91%) Strand = Plus / Plus Query: 251 gcgcagtcgctgccgctgcagccgctggctgagagcaagaacctgagcagggagtacggc 310 |||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 272 gcgcagccgctgccggtgcagccgctggcggagagcaagaacatgagccgggagtacggc 331 Query: 311 gggcagtggctgagcagcacgacgcggcacatacgcatctacgccgcgtacatcgacccg 370 |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 332 gggcagtggctgagttgcacgacgcggcacatccgcatctacgccgcgtacatcaacccg 391 Query: 371 gataccaacgccttcgaccagacgcagatggacaagctcacgctcatgctcgaccccacc 430 || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 392 gagaccaacgccttcgaccagacgcagatggacaagctcaccctcctcctcgaccccacc 451 Query: 431 gacgagttcgtctggaccgacgagacatgccagaaggtctacaacgagttccaggaccta 490 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 452 gacgagttcgtctggaccgacgagacgtgccagaaggtctacgacgagttccaggacctc 511 Query: 491 gttgatcactacgagggagctccactgtcagagtatacacttcgtttaatcggatctgat 550 || |||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 512 gtcgatcactacgagggcgcggagctgtcagagtacacgcttcgtttgatcggatctgat 571 Query: 551 ctcgagcactacatccgcaaactgctctatgacggggagatcaagtacaacatgaggtcc 610 || ||||||| ||||||||||||||| || || |||||||| ||||||||||||| ||| Sbjct: 572 cttgagcacttcatccgcaaactgctatacgatggggagataaagtacaacatgatgtct 631 Query: 611 agagtgctcaatttcagcatgggcaaaccccgtgtcaaattcaacagcagccagatccca 670 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 632 agagtcctcaatttcagcatgggcaaaccaaggatcaaattcaacagcagccagatccca 691 Query: 671 gatgtaaaataga 683 ||||||||||||| Sbjct: 692 gatgtaaaataga 704 >dbj|AK105343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H01, full insert sequence Length = 1067 Score = 557 bits (281), Expect = e-155 Identities = 395/433 (91%) Strand = Plus / Plus Query: 251 gcgcagtcgctgccgctgcagccgctggctgagagcaagaacctgagcagggagtacggc 310 |||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 272 gcgcagccgctgccggtgcagccgctggcggagagcaagaacatgagccgggagtacggc 331 Query: 311 gggcagtggctgagcagcacgacgcggcacatacgcatctacgccgcgtacatcgacccg 370 |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 332 gggcagtggctgagttgcacgacgcggcacatccgcatctacgccgcgtacatcaacccg 391 Query: 371 gataccaacgccttcgaccagacgcagatggacaagctcacgctcatgctcgaccccacc 430 || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 392 gagaccaacgccttcgaccagacgcagatggacaagctcaccctcctcctcgaccccacc 451 Query: 431 gacgagttcgtctggaccgacgagacatgccagaaggtctacaacgagttccaggaccta 490 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 452 gacgagttcgtctggaccgacgagacgtgccagaaggtctacgacgagttccaggacctc 511 Query: 491 gttgatcactacgagggagctccactgtcagagtatacacttcgtttaatcggatctgat 550 || |||||||||||||| || ||||||||||| || |||||||| |||||||||||| Sbjct: 512 gtcgatcactacgagggcgcggagctgtcagagtacacgcttcgtttgatcggatctgat 571 Query: 551 ctcgagcactacatccgcaaactgctctatgacggggagatcaagtacaacatgaggtcc 610 || ||||||| ||||||||||||||| || || |||||||| ||||||||||||| ||| Sbjct: 572 cttgagcacttcatccgcaaactgctatacgatggggagataaagtacaacatgatgtct 631 Query: 611 agagtgctcaatttcagcatgggcaaaccccgtgtcaaattcaacagcagccagatccca 670 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 632 agagtcctcaatttcagcatgggcaaaccaaggatcaaattcaacagcagccagatccca 691 Query: 671 gatgtaaaataga 683 ||||||||||||| Sbjct: 692 gatgtaaaataga 704 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 373 bits (188), Expect = e-100 Identities = 239/256 (93%) Strand = Plus / Plus Query: 251 gcgcagtcgctgccgctgcagccgctggctgagagcaagaacctgagcagggagtacggc 310 |||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 26951143 gcgcagccgctgccggtgcagccgctggcggagagcaagaacatgagccgggagtacggc 26951202 Query: 311 gggcagtggctgagcagcacgacgcggcacatacgcatctacgccgcgtacatcgacccg 370 |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 26951203 gggcagtggctgagttgcacgacgcggcacatccgcatctacgccgcgtacatcaacccg 26951262 Query: 371 gataccaacgccttcgaccagacgcagatggacaagctcacgctcatgctcgaccccacc 430 || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 26951263 gagaccaacgccttcgaccagacgcagatggacaagctcaccctcctcctcgaccccacc 26951322 Query: 431 gacgagttcgtctggaccgacgagacatgccagaaggtctacaacgagttccaggaccta 490 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 26951323 gacgagttcgtctggaccgacgagacgtgccagaaggtctacgacgagttccaggacctc 26951382 Query: 491 gttgatcactacgagg 506 || ||||||||||||| Sbjct: 26951383 gtcgatcactacgagg 26951398 Score = 208 bits (105), Expect = 3e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 515 ctgtcagagtatacacttcgtttaatcggatctgatctcgagcactacatccgcaaactg 574 ||||||||||| || |||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 26951561 ctgtcagagtacacgcttcgtttgatcggatctgatcttgagcacttcatccgcaaactg 26951620 Query: 575 ctctatgacggggagatcaagtacaacatgaggtccagagtgctcaatttcagcatgggc 634 || || || |||||||| ||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 26951621 ctatacgatggggagataaagtacaacatgatgtctagagtcctcaatttcagcatgggc 26951680 Query: 635 aaaccccgtgtcaaattcaacagcagccagatcccagatgtaaaataga 683 ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 26951681 aaaccaaggatcaaattcaacagcagccagatcccagatgtaaaataga 26951729 >emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 373 bits (188), Expect = e-100 Identities = 239/256 (93%) Strand = Plus / Plus Query: 251 gcgcagtcgctgccgctgcagccgctggctgagagcaagaacctgagcagggagtacggc 310 |||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 172203 gcgcagccgctgccggtgcagccgctggcggagagcaagaacatgagccgggagtacggc 172262 Query: 311 gggcagtggctgagcagcacgacgcggcacatacgcatctacgccgcgtacatcgacccg 370 |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 172263 gggcagtggctgagttgcacgacgcggcacatccgcatctacgccgcgtacatcaacccg 172322 Query: 371 gataccaacgccttcgaccagacgcagatggacaagctcacgctcatgctcgaccccacc 430 || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 172323 gagaccaacgccttcgaccagacgcagatggacaagctcaccctcctcctcgaccccacc 172382 Query: 431 gacgagttcgtctggaccgacgagacatgccagaaggtctacaacgagttccaggaccta 490 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 172383 gacgagttcgtctggaccgacgagacgtgccagaaggtctacgacgagttccaggacctc 172442 Query: 491 gttgatcactacgagg 506 || ||||||||||||| Sbjct: 172443 gtcgatcactacgagg 172458 Score = 208 bits (105), Expect = 3e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 515 ctgtcagagtatacacttcgtttaatcggatctgatctcgagcactacatccgcaaactg 574 ||||||||||| || |||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 172621 ctgtcagagtacacgcttcgtttgatcggatctgatcttgagcacttcatccgcaaactg 172680 Query: 575 ctctatgacggggagatcaagtacaacatgaggtccagagtgctcaatttcagcatgggc 634 || || || |||||||| ||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 172681 ctatacgatggggagataaagtacaacatgatgtctagagtcctcaatttcagcatgggc 172740 Query: 635 aaaccccgtgtcaaattcaacagcagccagatcccagatgtaaaataga 683 ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 172741 aaaccaaggatcaaattcaacagcagccagatcccagatgtaaaataga 172789 >emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 373 bits (188), Expect = e-100 Identities = 239/256 (93%) Strand = Plus / Plus Query: 251 gcgcagtcgctgccgctgcagccgctggctgagagcaagaacctgagcagggagtacggc 310 |||||| |||||||| ||||||||||||| |||||||||||| ||||| ||||||||||| Sbjct: 18843 gcgcagccgctgccggtgcagccgctggcggagagcaagaacatgagccgggagtacggc 18902 Query: 311 gggcagtggctgagcagcacgacgcggcacatacgcatctacgccgcgtacatcgacccg 370 |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 18903 gggcagtggctgagttgcacgacgcggcacatccgcatctacgccgcgtacatcaacccg 18962 Query: 371 gataccaacgccttcgaccagacgcagatggacaagctcacgctcatgctcgaccccacc 430 || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 18963 gagaccaacgccttcgaccagacgcagatggacaagctcaccctcctcctcgaccccacc 19022 Query: 431 gacgagttcgtctggaccgacgagacatgccagaaggtctacaacgagttccaggaccta 490 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 19023 gacgagttcgtctggaccgacgagacgtgccagaaggtctacgacgagttccaggacctc 19082 Query: 491 gttgatcactacgagg 506 || ||||||||||||| Sbjct: 19083 gtcgatcactacgagg 19098 Score = 208 bits (105), Expect = 3e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 515 ctgtcagagtatacacttcgtttaatcggatctgatctcgagcactacatccgcaaactg 574 ||||||||||| || |||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 19261 ctgtcagagtacacgcttcgtttgatcggatctgatcttgagcacttcatccgcaaactg 19320 Query: 575 ctctatgacggggagatcaagtacaacatgaggtccagagtgctcaatttcagcatgggc 634 || || || |||||||| ||||||||||||| ||| ||||| |||||||||||||||||| Sbjct: 19321 ctatacgatggggagataaagtacaacatgatgtctagagtcctcaatttcagcatgggc 19380 Query: 635 aaaccccgtgtcaaattcaacagcagccagatcccagatgtaaaataga 683 ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 19381 aaaccaaggatcaaattcaacagcagccagatcccagatgtaaaataga 19429