BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem113k17 (1032 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK102796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 827 0.0 emb|CT830887.1| Oryza sativa (indica cultivar-group) cDNA clone:... 276 2e-70 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 200 8e-48 dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 200 8e-48 dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 200 8e-48 >dbj|AK102796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108B21, full insert sequence Length = 1172 Score = 827 bits (417), Expect = 0.0 Identities = 597/657 (90%) Strand = Plus / Plus Query: 159 ggccgcggcggcgatggaagcgaccgcatcgacgccctcggccgcctcatgacgaggatc 218 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 232 ggccgcggcggcgatgggagcgaccgcatcgacgccctcggccgcctcctgacgcggatc 291 Query: 219 ttgcggcacatggcgtcggagctgaacctggacatgaggagcgacggctacgtgcgcgtt 278 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || Sbjct: 292 ttgcggcacatggcgtcggagctgaacctggagatgaggaccgacggctacgtgcgggtc 351 Query: 279 cgggacctgctcaagctcaacttgcagaccttcgccaagatccctctcaagtcccacacg 338 || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 352 cgcgacctgctcaagctcaacctgcagaccttcgccaagatccctctcaagtcccacacc 411 Query: 339 gtggaggaaattagggaggcggtcaggctggataacaagcagaggtttagtctgttggag 398 || || ||||| | ||||||||| || | ||||||||||||||||||| ||||||||||| Sbjct: 412 gtcgacgaaatcaaggaggcggttagacgggataacaagcagaggtttggtctgttggag 471 Query: 399 gaagatggtgagctgctcattcgggcaaaccaggggcacacagtaactactgttacttct 458 ||||||||||||||||| ||||| || |||||||| ||||||||||| ||||||||||| Sbjct: 472 gaagatggtgagctgctgattcgagctaaccagggccacacagtaacgactgttacttca 531 Query: 459 gagagcttgttgaaacccattttatcagctgatgaagtctcagtttgtgtgcatggaact 518 ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct: 532 gagagcttgttgaaacccattctatcagcagatgaagtctctgtttgtgtgcatggaaca 591 Query: 519 tacaggaaaaatcttgattcaatcttgcaatcggggctaaaacgtatggcgaggttacat 578 |||||||| || || |||||||||||||| |||||||||||| ||||| ||||||||| Sbjct: 592 tacaggaagaacctcgattcaatcttgcatcaggggctaaaacgaatggcaaggttacat 651 Query: 579 gtacatttctcaagtggcttaccctcagacggggaagtgattagtggtatgcggcggagt 638 ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||| |||| Sbjct: 652 gtacatttctcaagtggcttaccgacagatgggggagttattagcggtatgcggcagagt 711 Query: 639 gttaacatcttgatatatttggatgtcagcaaggcactgcaagatggaatgaagctatac 698 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| Sbjct: 712 gttaacatcttgatatatttggatgtcagtatggcactgcaagatggaatgaagctgtac 771 Query: 699 atttcagacaacaaggtgatactgacagagggttttgatggcgtcgttcctgtcaaatac 758 |||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||| Sbjct: 772 atttcagacaacaaggtgattctgacagagggtttcgatggcgttgttcctgtgaagtac 831 Query: 759 ttcgagaagattgaaacgtgtccagggcaagagccgataccatttcaaagatagaga 815 |||||||| |||||||| || |||||| || |||||||||||| ||| ||||||| Sbjct: 832 ttcgagaaaattgaaacatggccagggagagcaccgataccatttgaaaaatagaga 888 >emb|CT830887.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063H03, full insert sequence Length = 1079 Score = 276 bits (139), Expect = 2e-70 Identities = 169/179 (94%) Strand = Plus / Plus Query: 159 ggccgcggcggcgatggaagcgaccgcatcgacgccctcggccgcctcatgacgaggatc 218 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||| Sbjct: 208 ggccgcggcggcgatgggagcgaccgcatcgacgccctcggccgcctcctgacgcggata 267 Query: 219 ttgcggcacatggcgtcggagctgaacctggacatgaggagcgacggctacgtgcgcgtt 278 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || Sbjct: 268 ttgcggcacatggcgtcggagctgaacctggagatgaggaccgacggctacgtgcgggtc 327 Query: 279 cgggacctgctcaagctcaacttgcagaccttcgccaagatccctctcaagtcccacac 337 || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 328 cgcgacctgctcaagctcaacctgcagaccttcgccaagatccctctcaagtcccacac 386 Score = 117 bits (59), Expect = 9e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 355 aggcggtcaggctggataacaagcagaggtttagtctgttggaggaagatggtgagctgc 414 ||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 577 aggcggttagacgggataacaagcagaggtttggtctgttggaggaagatggtgagctgc 636 Query: 415 tcattcgggcaaaccaggggcacacagtaac 445 | ||||| || |||||||| ||||||||||| Sbjct: 637 tgattcgagctaaccagggccacacagtaac 667 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 200 bits (101), Expect = 8e-48 Identities = 122/129 (94%) Strand = Plus / Minus Query: 209 gacgaggatcttgcggcacatggcgtcggagctgaacctggacatgaggagcgacggcta 268 |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1824995 gacgcggatcttgcggcacatggcgtcggagctgaacctggagatgaggaccgacggcta 1824936 Query: 269 cgtgcgcgttcgggacctgctcaagctcaacttgcagaccttcgccaagatccctctcaa 328 |||||| || || |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1824935 cgtgcgggtccgcgacctgctcaagctcaacctgcagaccttcgccaagatccctctcaa 1824876 Query: 329 gtcccacac 337 ||||||||| Sbjct: 1824875 gtcccacac 1824867 Score = 151 bits (76), Expect = 7e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 680 agatggaatgaagctatacatttcagacaacaaggtgatactgacagagggttttgatgg 739 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1822218 agatggaatgaagctgtacatttcagacaacaaggtgattctgacagagggtttcgatgg 1822159 Query: 740 cgtcgttcctgtcaaatacttcgagaagattgaaacgtgtccagggcaagagccgatacc 799 ||| |||||||| || ||||||||||| |||||||| || |||||| || |||||||| Sbjct: 1822158 cgttgttcctgtgaagtacttcgagaaaattgaaacatggccagggagagcaccgatacc 1822099 Query: 800 atttcaaagatagaga 815 |||| ||| ||||||| Sbjct: 1822098 atttgaaaaatagaga 1822083 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Minus Query: 499 cagtttgtgtgcatggaacttacaggaaaaatcttgattcaatcttgcaatcggggctaa 558 ||||||||||||||||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 1822714 cagtttgtgtgcatggaacatacaggaagaacctcgattcaatcttgcatcaggggctaa 1822655 Query: 559 aacgtatggcgaggttacatgtacatttctcaagtggcttaccctcagacggggaagtga 618 |||| ||||| |||||||||||||||||||||||||||||||| |||| |||| ||| | Sbjct: 1822654 aacgaatggcaaggttacatgtacatttctcaagtggcttaccgacagatgggggagtta 1822595 Query: 619 ttagtggta 627 |||| |||| Sbjct: 1822594 ttagcggta 1822586 Score = 117 bits (59), Expect = 9e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 355 aggcggtcaggctggataacaagcagaggtttagtctgttggaggaagatggtgagctgc 414 ||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1824676 aggcggttagacgggataacaagcagaggtttggtctgttggaggaagatggtgagctgc 1824617 Query: 415 tcattcgggcaaaccaggggcacacagtaac 445 | ||||| || |||||||| ||||||||||| Sbjct: 1824616 tgattcgagctaaccagggccacacagtaac 1824586 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 624 ggtatgcggcggagtgttaacatcttgatatatttggatgtcagcaaggcactgcaag 681 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 1822368 ggtatgcggcagagtgttaacatcttgatatatttggatgtcagtatggcactgcaag 1822311 Score = 87.7 bits (44), Expect = 8e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 159 ggccgcggcggcgatggaagcgaccgcatcgacgccctcggccgcctc 206 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1825144 ggccgcggcggcgatgggagcgaccgcatcgacgccctcggccgcctc 1825097 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 447 actgttacttctgagagcttgttgaaacccattttatcagctgatgaagtctc 499 ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1822842 actgttacttcagagagcttgttgaaacccattctatcagcagatgaagtctc 1822790 >dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0679C08 Length = 156266 Score = 200 bits (101), Expect = 8e-48 Identities = 122/129 (94%) Strand = Plus / Minus Query: 209 gacgaggatcttgcggcacatggcgtcggagctgaacctggacatgaggagcgacggcta 268 |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 150144 gacgcggatcttgcggcacatggcgtcggagctgaacctggagatgaggaccgacggcta 150085 Query: 269 cgtgcgcgttcgggacctgctcaagctcaacttgcagaccttcgccaagatccctctcaa 328 |||||| || || |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150084 cgtgcgggtccgcgacctgctcaagctcaacctgcagaccttcgccaagatccctctcaa 150025 Query: 329 gtcccacac 337 ||||||||| Sbjct: 150024 gtcccacac 150016 Score = 151 bits (76), Expect = 7e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 680 agatggaatgaagctatacatttcagacaacaaggtgatactgacagagggttttgatgg 739 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 147367 agatggaatgaagctgtacatttcagacaacaaggtgattctgacagagggtttcgatgg 147308 Query: 740 cgtcgttcctgtcaaatacttcgagaagattgaaacgtgtccagggcaagagccgatacc 799 ||| |||||||| || ||||||||||| |||||||| || |||||| || |||||||| Sbjct: 147307 cgttgttcctgtgaagtacttcgagaaaattgaaacatggccagggagagcaccgatacc 147248 Query: 800 atttcaaagatagaga 815 |||| ||| ||||||| Sbjct: 147247 atttgaaaaatagaga 147232 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Minus Query: 499 cagtttgtgtgcatggaacttacaggaaaaatcttgattcaatcttgcaatcggggctaa 558 ||||||||||||||||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 147863 cagtttgtgtgcatggaacatacaggaagaacctcgattcaatcttgcatcaggggctaa 147804 Query: 559 aacgtatggcgaggttacatgtacatttctcaagtggcttaccctcagacggggaagtga 618 |||| ||||| |||||||||||||||||||||||||||||||| |||| |||| ||| | Sbjct: 147803 aacgaatggcaaggttacatgtacatttctcaagtggcttaccgacagatgggggagtta 147744 Query: 619 ttagtggta 627 |||| |||| Sbjct: 147743 ttagcggta 147735 Score = 117 bits (59), Expect = 9e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 355 aggcggtcaggctggataacaagcagaggtttagtctgttggaggaagatggtgagctgc 414 ||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149825 aggcggttagacgggataacaagcagaggtttggtctgttggaggaagatggtgagctgc 149766 Query: 415 tcattcgggcaaaccaggggcacacagtaac 445 | ||||| || |||||||| ||||||||||| Sbjct: 149765 tgattcgagctaaccagggccacacagtaac 149735 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 624 ggtatgcggcggagtgttaacatcttgatatatttggatgtcagcaaggcactgcaag 681 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 147517 ggtatgcggcagagtgttaacatcttgatatatttggatgtcagtatggcactgcaag 147460 Score = 87.7 bits (44), Expect = 8e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 159 ggccgcggcggcgatggaagcgaccgcatcgacgccctcggccgcctc 206 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150293 ggccgcggcggcgatgggagcgaccgcatcgacgccctcggccgcctc 150246 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 447 actgttacttctgagagcttgttgaaacccattttatcagctgatgaagtctc 499 ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 147991 actgttacttcagagagcttgttgaaacccattctatcagcagatgaagtctc 147939 >dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 200 bits (101), Expect = 8e-48 Identities = 122/129 (94%) Strand = Plus / Minus Query: 209 gacgaggatcttgcggcacatggcgtcggagctgaacctggacatgaggagcgacggcta 268 |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 25473 gacgcggatcttgcggcacatggcgtcggagctgaacctggagatgaggaccgacggcta 25414 Query: 269 cgtgcgcgttcgggacctgctcaagctcaacttgcagaccttcgccaagatccctctcaa 328 |||||| || || |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 25413 cgtgcgggtccgcgacctgctcaagctcaacctgcagaccttcgccaagatccctctcaa 25354 Query: 329 gtcccacac 337 ||||||||| Sbjct: 25353 gtcccacac 25345 Score = 151 bits (76), Expect = 7e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 680 agatggaatgaagctatacatttcagacaacaaggtgatactgacagagggttttgatgg 739 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 22696 agatggaatgaagctgtacatttcagacaacaaggtgattctgacagagggtttcgatgg 22637 Query: 740 cgtcgttcctgtcaaatacttcgagaagattgaaacgtgtccagggcaagagccgatacc 799 ||| |||||||| || ||||||||||| |||||||| || |||||| || |||||||| Sbjct: 22636 cgttgttcctgtgaagtacttcgagaaaattgaaacatggccagggagagcaccgatacc 22577 Query: 800 atttcaaagatagaga 815 |||| ||| ||||||| Sbjct: 22576 atttgaaaaatagaga 22561 Score = 137 bits (69), Expect = 1e-28 Identities = 114/129 (88%) Strand = Plus / Minus Query: 499 cagtttgtgtgcatggaacttacaggaaaaatcttgattcaatcttgcaatcggggctaa 558 ||||||||||||||||||| |||||||| || || |||||||||||||| |||||||| Sbjct: 23192 cagtttgtgtgcatggaacatacaggaagaacctcgattcaatcttgcatcaggggctaa 23133 Query: 559 aacgtatggcgaggttacatgtacatttctcaagtggcttaccctcagacggggaagtga 618 |||| ||||| |||||||||||||||||||||||||||||||| |||| |||| ||| | Sbjct: 23132 aacgaatggcaaggttacatgtacatttctcaagtggcttaccgacagatgggggagtta 23073 Query: 619 ttagtggta 627 |||| |||| Sbjct: 23072 ttagcggta 23064 Score = 117 bits (59), Expect = 9e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 355 aggcggtcaggctggataacaagcagaggtttagtctgttggaggaagatggtgagctgc 414 ||||||| || | ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 25154 aggcggttagacgggataacaagcagaggtttggtctgttggaggaagatggtgagctgc 25095 Query: 415 tcattcgggcaaaccaggggcacacagtaac 445 | ||||| || |||||||| ||||||||||| Sbjct: 25094 tgattcgagctaaccagggccacacagtaac 25064 Score = 91.7 bits (46), Expect = 5e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 624 ggtatgcggcggagtgttaacatcttgatatatttggatgtcagcaaggcactgcaag 681 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 22846 ggtatgcggcagagtgttaacatcttgatatatttggatgtcagtatggcactgcaag 22789 Score = 87.7 bits (44), Expect = 8e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 159 ggccgcggcggcgatggaagcgaccgcatcgacgccctcggccgcctc 206 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 25622 ggccgcggcggcgatgggagcgaccgcatcgacgccctcggccgcctc 25575 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 447 actgttacttctgagagcttgttgaaacccattttatcagctgatgaagtctc 499 ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 23320 actgttacttcagagagcttgttgaaacccattctatcagcagatgaagtctc 23268