BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem113e19
         (1035 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AM049172.1| Triticum turgidum mre11 gene for meiotic recombi...   153   2e-33
emb|AM049170.1| Aegilops tauschii mre11 gene for meiotic recombi...   153   2e-33
emb|AM049169.1| Triticum monococcum mre11 gene for meiotic recom...   153   2e-33
emb|AM049171.1| Triticum turgidum mre11 gene for meiotic recombi...   137   1e-28
emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...   111   6e-21

>emb|AM049172.1| Triticum turgidum mre11 gene for meiotic recombination 11, exons
            1-22, haplotype B
          Length = 4973

 Score =  153 bits (77), Expect = 2e-33
 Identities = 183/217 (84%), Gaps = 6/217 (2%)
 Strand = Plus / Plus

                                                                        
Query: 130  tgttctgcaggtagattactccgagttttcaacaataaatccacaacgatttggtcagaa 189
            |||| |||||||||||||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 2532 tgttttgcaggtagattactctgggttttcaacaataaacccgcaacgatttggtcagaa 2591

                                                                        
Query: 190  gtacattggcaaggtacctcagacactaacgtggcacttactgaagtgtccttctcaatc 249
            |||  | |||||||||||||||||||||| |    | ||| | |||||| |||||||| |
Sbjct: 2592 gtatgtcggcaaggtacctcagacactaatgcattaattattaaagtgttcttctcaagc 2651

                                                                        
Query: 250  ttacctgaatgaacttatttgattacttattgt----aaggttgcgaacccccaagatat 305
            |||| |||| ||||| |||| ||  | | ||||    |||||||||||||||||||  ||
Sbjct: 2652 ttacttgaacgaactcatttcatggcctcttgttgtaaaggttgcgaacccccaag--at 2709

                                                 
Query: 306  attctcattttctcaaaatcagcaaagaagcgtcaga 342
            |||||||||||||||||| ||||||||||||| ||||
Sbjct: 2710 attctcattttctcaaaagcagcaaagaagcgccaga 2746



 Score =  103 bits (52), Expect = 1e-18
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                        
Query: 505  aatatcgatgattttgagagacttcgtcctgaggaactaaatcaacaaacaattgaagct 564
            ||||||||||| |  |||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2877 aatatcgatgagtccgagaaacttcgtcctgaggaactaaaccaacaaactattgaagct 2936

                                                
Query: 565  tcggttgcagaaagtaacttgctatttattaaaact 600
            | ||||||||||| ||||||| ||||| || |||||
Sbjct: 2937 ttggttgcagaaaataacttggtatttcttgaaact 2972


>emb|AM049170.1| Aegilops tauschii mre11 gene for meiotic recombination 11, exons
            1-22, haplotype D
          Length = 5046

 Score =  153 bits (77), Expect = 2e-33
 Identities = 183/217 (84%), Gaps = 6/217 (2%)
 Strand = Plus / Plus

                                                                        
Query: 130  tgttctgcaggtagattactccgagttttcaacaataaatccacaacgatttggtcagaa 189
            |||| |||||||||||||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 2558 tgttttgcaggtagattactctgggttttcaacaataaacccgcaacgatttggtcagaa 2617

                                                                        
Query: 190  gtacattggcaaggtacctcagacactaacgtggcacttactgaagtgtccttctcaatc 249
            |||  | ||||||||||||| |||||||| |    | ||| | |||||| |||||||| |
Sbjct: 2618 gtatgtcggcaaggtacctcggacactaatgcattaattatttaagtgttcttctcaagc 2677

                                                                        
Query: 250  ttacctgaatgaacttatttgattacttattgt----aaggttgcgaacccccaagatat 305
            ||||||||| ||||| |||| ||  | | ||||    |||||||||||||||||||  ||
Sbjct: 2678 ttacctgaacgaactcatttcatggcctcttgttgtaaaggttgcgaacccccaag--at 2735

                                                 
Query: 306  attctcattttctcaaaatcagcaaagaagcgtcaga 342
            |||||||||||||||||| ||||||||||||| ||||
Sbjct: 2736 attctcattttctcaaaagcagcaaagaagcgccaga 2772



 Score =  103 bits (52), Expect = 1e-18
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                        
Query: 505  aatatcgatgattttgagagacttcgtcctgaggaactaaatcaacaaacaattgaagct 564
            ||||||||||| |  |||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2868 aatatcgatgagtccgagaaacttcgtcctgaggaactaaaccaacaaactattgaagct 2927

                                                
Query: 565  tcggttgcagaaagtaacttgctatttattaaaact 600
            | ||||||||||| ||||||| ||||| || |||||
Sbjct: 2928 ttggttgcagaaaataacttggtatttcttgaaact 2963


>emb|AM049169.1| Triticum monococcum mre11 gene for meiotic recombination 11, exons
            1-22, haplotype A
          Length = 4960

 Score =  153 bits (77), Expect = 2e-33
 Identities = 183/217 (84%), Gaps = 6/217 (2%)
 Strand = Plus / Plus

                                                                        
Query: 130  tgttctgcaggtagattactccgagttttcaacaataaatccacaacgatttggtcagaa 189
            |||| |||||||||||||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 2557 tgttttgcaggtagattactctgggttttcaacaataaacccgcaacgatttggtcagaa 2616

                                                                        
Query: 190  gtacattggcaaggtacctcagacactaacgtggcacttactgaagtgtccttctcaatc 249
            |||  | ||||||||||||| |||||||| |    | ||| | |||||| |||||||| |
Sbjct: 2617 gtatgtcggcaaggtacctcggacactaatgcattagttattaaagtgttcttctcaagc 2676

                                                                        
Query: 250  ttacctgaatgaacttatttgattacttattgt----aaggttgcgaacccccaagatat 305
            ||||||||| ||||| |||| ||  | | ||||    |||||||||||||||||||  ||
Sbjct: 2677 ttacctgaacgaactcatttcatggcctcttgttgtaaaggttgcgaacccccaag--at 2734

                                                 
Query: 306  attctcattttctcaaaatcagcaaagaagcgtcaga 342
            |||||||||||||||||| ||||||||||||| ||||
Sbjct: 2735 attctcattttctcaaaagcagcaaagaagcgccaga 2771



 Score =  103 bits (52), Expect = 1e-18
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                        
Query: 505  aatatcgatgattttgagagacttcgtcctgaggaactaaatcaacaaacaattgaagct 564
            ||||||||||| |  |||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2867 aatatcgatgagtccgagaaacttcgtcctgaggaactaaaccaacaaactattgaagct 2926

                                                
Query: 565  tcggttgcagaaagtaacttgctatttattaaaact 600
            | ||||||||||| ||||||| ||||| || |||||
Sbjct: 2927 ttggttgcagaaaataacttggtatttcttgaaact 2962


>emb|AM049171.1| Triticum turgidum mre11 gene for meiotic recombination 11, exons
            1-22, haplotype A
          Length = 4971

 Score =  137 bits (69), Expect = 1e-28
 Identities = 181/217 (83%), Gaps = 6/217 (2%)
 Strand = Plus / Plus

                                                                        
Query: 130  tgttctgcaggtagattactccgagttttcaacaataaatccacaacgatttggtcagaa 189
            |||| |||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||
Sbjct: 2559 tgttttgcaggtagattactctgggttttcaacaataaacccacagcgatttggtcagaa 2618

                                                                        
Query: 190  gtacattggcaaggtacctcagacactaacgtggcacttactgaagtgtccttctcaatc 249
            |||  | ||||||||||||| | |||||| |    | ||| | |||||| |||||||| |
Sbjct: 2619 gtatgtcggcaaggtacctcgggcactaatgcattaattattaaagtgttcttctcaagc 2678

                                                                        
Query: 250  ttacctgaatgaacttatttgattacttattgt----aaggttgcgaacccccaagatat 305
            ||| ||||| ||||| |||| ||  | | ||||    |||||||||||||||||||  ||
Sbjct: 2679 ttagctgaacgaactcatttcatggcctcttgttgtaaaggttgcgaacccccaag--at 2736

                                                 
Query: 306  attctcattttctcaaaatcagcaaagaagcgtcaga 342
            |||||||||||||||||| ||||||||||||| ||||
Sbjct: 2737 attctcattttctcaaaagcagcaaagaagcgccaga 2773



 Score =  103 bits (52), Expect = 1e-18
 Identities = 85/96 (88%)
 Strand = Plus / Plus

                                                                        
Query: 505  aatatcgatgattttgagagacttcgtcctgaggaactaaatcaacaaacaattgaagct 564
            ||||||||||| |  |||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2905 aatatcgatgagtccgagaaacttcgtcctgaggaactaaaccaacaaactattgaagct 2964

                                                
Query: 565  tcggttgcagaaagtaacttgctatttattaaaact 600
            | ||||||||||| ||||||| ||||| || |||||
Sbjct: 2965 ttggttgcagaaaataacttggtatttcttgaaact 3000


>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete
             sequence
          Length = 63554

 Score =  111 bits (56), Expect = 6e-21
 Identities = 68/72 (94%)
 Strand = Plus / Plus

                                                                         
Query: 121   tgctcatattgttctgcaggtagattactccgagttttcaacaataaatccacaacgatt 180
             |||||||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 40896 tgctcatattgttctgtaggtagattactctgggttttcaacaattaatccacaacgatt 40955

                         
Query: 181   tggtcagaagta 192
             ||||||||||||
Sbjct: 40956 tggtcagaagta 40967



 Score =  103 bits (52), Expect = 1e-18
 Identities = 111/129 (86%), Gaps = 5/129 (3%)
 Strand = Plus / Plus

                                                                         
Query: 248   tcttacctgaatgaacttatttgat---tacttattgtaaggttgcgaacccccaagata 304
             |||||||||||||| ||||||||||   | ||| |||||||||||| |||||||| ||||
Sbjct: 41013 tcttacctgaatgagcttatttgatagcttcttgttgtaaggttgcaaacccccaggata 41072

                                                                         
Query: 305   tattctcattttctcaaaatcagcaaagaagcgtcagattgcaggaggtatttccttatg 364
             |  ||| || ||||||||||||||||| |||||||||| | | ||||||||| | |||||
Sbjct: 41073 t--tcttatcttctcaaaatcagcaaaaaagcgtcagactactggaggtattcctttatg 41130

                      
Query: 365   tttaagaaa 373
             |||||||||
Sbjct: 41131 tttaagaaa 41139



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 98/115 (85%)
 Strand = Plus / Plus

                                                                         
Query: 505   aatatcgatgattttgagagacttcgtcctgaggaactaaatcaacaaacaattgaagct 564
             ||||| ||||| | ||||| ||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 41259 aatattgatgactctgagaaacttcgtcccgaggaactaaaccaacaaactattgaagct 41318

                                                                    
Query: 565   tcggttgcagaaagtaacttgctatttattaaaactgcatatactgtattctttt 619
             | |||||| |||| ||||||| || || || ||||| ||||| ||||||| ||||
Sbjct: 41319 ttggttgccgaaaataacttggtacttcttgaaactacatattctgtattatttt 41373