BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112n20 (939 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072148.1| Oryza sativa (japonica cultivar-group) Os11g... 654 0.0 dbj|AK070935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 646 0.0 ref|NM_001072557.1| Oryza sativa (japonica cultivar-group) Os12g... 448 e-122 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 143 1e-30 emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311... 143 1e-30 >ref|NM_001072148.1| Oryza sativa (japonica cultivar-group) Os11g0123500 (Os11g0123500) mRNA, complete cds Length = 966 Score = 654 bits (330), Expect = 0.0 Identities = 584/668 (87%), Gaps = 3/668 (0%) Strand = Plus / Plus Query: 146 gggtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaagaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 171 gggtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaaga---agaag 227 Query: 206 gaggctgcctcttcttcccttcccactttggatcggctacacgagactctagaaatgctg 265 ||||||||||| ||| | || |||||||||||||| || || |||||||||||||||||| Sbjct: 228 gaggctgcctcctctgcgctccccactttggatcgtctccatgagactctagaaatgctg 287 Query: 266 gagaagaaagagcgttttcttcagagaaaatcttctgcggaagtagaaaaagctaaggat 325 |||||||||||| | |||||||||| || ||||||| ||||| ||||| ||||||||| Sbjct: 288 gagaagaaagagtgctttcttcagaagaaggcttctgcagaagttgaaaaggctaaggat 347 Query: 326 tatacaaaagcaaagaacaagaatgctgcaattcagtgtttaaagaaaaaaaagttgtac 385 ||||||||||| |||||||| | ||||||||||||||| |||||||||| ||| |||| Sbjct: 348 tatacaaaagctaagaacaaaagcgctgcaattcagtgtctaaagaaaaagaagctgtat 407 Query: 386 gaaacacaaattgagcagctagcaaattttcaattgcgagttcatgatcagattataatg 445 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 408 gaaacacaaattgagcagctagcaaatttccaattgcgagttcatgatcagataataatg 467 Query: 446 cttgaaagtgcgaaggcaactactgacactgttgatgctttgcgctccggatcatctgct 505 ||||| || || |||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 468 cttgagagcgcaaaggcaaccacagataccgttgatgctttgcgctctggatcatctgct 527 Query: 506 gtcaaagctattcaacaatcactgagtattgatgacatcgaaaatgcaattgaagaggcg 565 |||||||||||||| || ||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 528 gtcaaagctattcatcagtcagtgagtattgatgacattgaaaatgccattgaagaggca 587 Query: 566 aatgatcaaacagaaaatatgagacagatacaggaagcactggcaacgccagtcggtgcc 625 ||||| || |||||||||||||| ||||||||||| ||||| ||||| ||| | || || Sbjct: 588 aatgaacacacagaaaatatgaggcagatacaggaggcacttgcaacaccaattggcgct 647 Query: 626 tctgctgattttgacgaggacgagctagaagcagagctggaagatctcgaggagcaagag 685 ||||||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||| Sbjct: 648 tctgctgatttcgacgaggatgaactagaagcagagctggaagatctggaggaggaagag 707 Query: 686 cttgatgaagagttgcctgaaccaccgcagatgacatcagtggtaccatcagcatctgct 745 || || | ||| ||||||||||||| |||| ||| ||| ||||||||| | | Sbjct: 708 ctcgaccatgagctgcctgaaccacctcagagtacacgcatggaaccatcagcgagagtt 767 Query: 746 acaacatcttctcaaccagccactgatctggccgagctgaccaaacttcaggcagagatg 805 ||||| || ||||||||||||| |||| |||| || |||||||||||||| ||||||||| Sbjct: 768 acaacttcatctcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatg 827 Query: 806 gcacttta 813 || ||||| Sbjct: 828 gcgcttta 835 >dbj|AK070935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068B07, full insert sequence Length = 967 Score = 646 bits (326), Expect = 0.0 Identities = 583/668 (87%), Gaps = 3/668 (0%) Strand = Plus / Plus Query: 146 gggtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaagaag 205 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gggtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaag--- 228 Query: 206 gaggctgcctcttcttcccttcccactttggatcggctacacgagactctagaaatgctg 265 ||||||||||| ||| | || |||||||||||||| || || |||||||||||||||||| Sbjct: 229 gaggctgcctcctctgcgctccccactttggatcgtctccatgagactctagaaatgctg 288 Query: 266 gagaagaaagagcgttttcttcagagaaaatcttctgcggaagtagaaaaagctaaggat 325 |||||||||||| | |||||||||| || |||||| ||||| ||||| ||||||||| Sbjct: 289 gagaagaaagagtgctttcttcagaagaaggtttctgcagaagttgaaaaggctaaggat 348 Query: 326 tatacaaaagcaaagaacaagaatgctgcaattcagtgtttaaagaaaaaaaagttgtac 385 ||||||||||| |||||||| | ||||||||||||||| |||||||||| ||| |||| Sbjct: 349 tatacaaaagctaagaacaaaagcgctgcaattcagtgtctaaagaaaaagaagctgtat 408 Query: 386 gaaacacaaattgagcagctagcaaattttcaattgcgagttcatgatcagattataatg 445 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 409 gaaacacaaattgagcagctagcaaatttccaattgcgagttcatgatcagataataatg 468 Query: 446 cttgaaagtgcgaaggcaactactgacactgttgatgctttgcgctccggatcatctgct 505 ||||| || || |||||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 469 cttgagagcgcaaaggcaaccacagataccgttgatgctttgcgctctggatcatctgct 528 Query: 506 gtcaaagctattcaacaatcactgagtattgatgacatcgaaaatgcaattgaagaggcg 565 |||||||||||||| || ||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 529 gtcaaagctattcatcagtcagtgagtattgatgacattgaaaatgccattgaagaggca 588 Query: 566 aatgatcaaacagaaaatatgagacagatacaggaagcactggcaacgccagtcggtgcc 625 ||||| || |||||||||||||| ||||||||||| ||||| ||||| ||| | || || Sbjct: 589 aatgaacacacagaaaatatgaggcagatacaggaggcacttgcaacaccaattggcgct 648 Query: 626 tctgctgattttgacgaggacgagctagaagcagagctggaagatctcgaggagcaagag 685 ||||||||||| |||||||| || ||||||||||||||||||||||| |||||| ||||| Sbjct: 649 tctgctgatttcgacgaggatgaactagaagcagagctggaagatctggaggaggaagag 708 Query: 686 cttgatgaagagttgcctgaaccaccgcagatgacatcagtggtaccatcagcatctgct 745 || || | ||| ||||||||||||| |||| ||| ||| ||||||||| | | Sbjct: 709 ctcgaccatgagctgcctgaaccacctcagagtacacgcatgggaccatcagcgagagtt 768 Query: 746 acaacatcttctcaaccagccactgatctggccgagctgaccaaacttcaggcagagatg 805 ||||| || ||||||||||||| |||| |||| || |||||||||||||| ||||||||| Sbjct: 769 acaacttcatctcaaccagccaatgatttggctgaactgaccaaacttcaagcagagatg 828 Query: 806 gcacttta 813 || ||||| Sbjct: 829 gcgcttta 836 >ref|NM_001072557.1| Oryza sativa (japonica cultivar-group) Os12g0121400 (Os12g0121400) mRNA, complete cds Length = 552 Score = 448 bits (226), Expect = e-122 Identities = 403/462 (87%) Strand = Plus / Plus Query: 260 atgctggagaagaaagagcgttttcttcagagaaaatcttctgcggaagtagaaaaagct 319 |||||||||||||||||| |||| ||||||| ||| ||||||| ||||| |||| |||| Sbjct: 1 atgctggagaagaaagagtgtttccttcagaaaaaggcttctgcagaagtcgaaagagct 60 Query: 320 aaggattatacaaaagcaaagaacaagaatgctgcaattcagtgtttaaagaaaaaaaag 379 ||||| ||||||||||| |||||||| | ||||||||||| ||| |||||||||| ||| Sbjct: 61 aaggactatacaaaagctaagaacaaaagcgctgcaattcaatgtctaaagaaaaagaag 120 Query: 380 ttgtacgaaacacaaattgagcagctagcaaattttcaattgcgagttcatgatcagatt 439 ||||| |||||||| ||||||||||||||||| || ||||| || |||||||||||||| Sbjct: 121 ttgtatgaaacacagattgagcagctagcaaacttccaattacgggttcatgatcagata 180 Query: 440 ataatgcttgaaagtgcgaaggcaactactgacactgttgatgctttgcgctccggatca 499 ||||||||||| ||||| |||||||| || || |||||||||||||||||||| |||||| Sbjct: 181 ataatgcttgagagtgcaaaggcaaccacagatactgttgatgctttgcgctctggatca 240 Query: 500 tctgctgtcaaagctattcaacaatcactgagtattgatgacatcgaaaatgcaattgaa 559 |||||||||||||||||||| || ||| ||||||| |||||||| |||||||| |||||| Sbjct: 241 tctgctgtcaaagctattcaccagtcagtgagtatcgatgacattgaaaatgccattgaa 300 Query: 560 gaggcgaatgatcaaacagaaaatatgagacagatacaggaagcactggcaacgccagtc 619 ||||| ||||| || ||||| |||||||| ||||||||||| || || ||||| ||| | Sbjct: 301 gaggcaaatgaacacacagagaatatgaggcagatacaggaggcccttgcaacaccaatt 360 Query: 620 ggtgcctctgctgattttgacgaggacgagctagaagcagagctggaagatctcgaggag 679 || || |||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 361 ggcgcttctgctgattttgacgaggatgagctagaagcagagctggaagatctagaggag 420 Query: 680 caagagcttgatgaagagttgcctgaaccaccgcagatgaca 721 ||||||| || | || ||||||||||||| |||| |||| Sbjct: 421 gaagagctcgagaatgatctgcctgaaccacctcagaggaca 462 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Minus Query: 148 gtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaagaagga 207 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1014134 gtgttacaagaagatgctgaagaaactgctatcaaagcccaagagcaagaagaagaagga 1014075 Query: 208 ggctgcctcttcttcccttcccactttggatcggct 243 ||||||||| ||| |||| |||||||||||| |||| Sbjct: 1014074 ggctgcctcctctgccctccccactttggataggct 1014039 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 435 agattataatgcttgaaagtgcgaaggcaactactgacactgttgatgctttgcgctccg 494 |||| ||||||||||| ||||| |||||||| || || |||||||||||||||||||| | Sbjct: 1012281 agataataatgcttgagagtgcaaaggcaaccacagatactgttgatgctttgcgctctg 1012222 Query: 495 gatcatctgctgtcaaagctattca 519 ||||||||||||||||||||||||| Sbjct: 1012221 gatcatctgctgtcaaagctattca 1012197 Score = 113 bits (57), Expect = 1e-21 Identities = 87/97 (89%) Strand = Plus / Minus Query: 249 agactctagaaatgctggagaagaaagagcgttttcttcagagaaaatcttctgcggaag 308 ||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||| |||| Sbjct: 1013090 agactctagaaatgctggagaagaaagagtgtttccttcagaaaaaggcttctgcagaag 1013031 Query: 309 tagaaaaagctaaggattatacaaaagcaaagaacaa 345 | |||| ||||||||| ||||||||||| |||||||| Sbjct: 1013030 tcgaaagagctaaggactatacaaaagctaagaacaa 1012994 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Minus Query: 529 gagtattgatgacatcgaaaatgcaattgaagaggcgaatgatcaaacagaaaatatgag 588 |||||| |||||||| |||||||| ||||||||||| ||||| || ||||| |||||||| Sbjct: 1011906 gagtatcgatgacattgaaaatgccattgaagaggcaaatgaacacacagagaatatgag 1011847 Query: 589 acagatacaggaagcactggcaacgccagtcggtgcctctgctgattttgacgagg 644 ||||||||||| || || ||||| ||| | || || ||||||||||||||||||| Sbjct: 1011846 gcagatacaggaggcccttgcaacaccaattggcgcttctgctgattttgacgagg 1011791 Score = 101 bits (51), Expect = 5e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 350 gctgcaattcagtgtttaaagaaaaaaaagttgtacgaaacacaaattgagcagctagca 409 ||||||||||| ||| |||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 1012470 gctgcaattcaatgtctaaagaaaaagaagttgtatgaaacacagattgagcagctagca 1012411 Query: 410 aattttcaattgcgagttcatgatcag 436 || || ||||| || |||||||||||| Sbjct: 1012410 aacttccaattacgggttcatgatcag 1012384 >emb|BX000506.4|CNS08CDW Oryza sativa chromosome 12, . BAC OJ1311_G04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 97056 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Minus Query: 148 gtgtgacaagaagatgctgaagaaactgctatcaaagcctaagagcaagaagaagaagga 207 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9405 gtgttacaagaagatgctgaagaaactgctatcaaagcccaagagcaagaagaagaagga 9346 Query: 208 ggctgcctcttcttcccttcccactttggatcggct 243 ||||||||| ||| |||| |||||||||||| |||| Sbjct: 9345 ggctgcctcctctgccctccccactttggataggct 9310 Score = 113 bits (57), Expect = 1e-21 Identities = 78/85 (91%) Strand = Plus / Minus Query: 435 agattataatgcttgaaagtgcgaaggcaactactgacactgttgatgctttgcgctccg 494 |||| ||||||||||| ||||| |||||||| || || |||||||||||||||||||| | Sbjct: 7552 agataataatgcttgagagtgcaaaggcaaccacagatactgttgatgctttgcgctctg 7493 Query: 495 gatcatctgctgtcaaagctattca 519 ||||||||||||||||||||||||| Sbjct: 7492 gatcatctgctgtcaaagctattca 7468 Score = 113 bits (57), Expect = 1e-21 Identities = 87/97 (89%) Strand = Plus / Minus Query: 249 agactctagaaatgctggagaagaaagagcgttttcttcagagaaaatcttctgcggaag 308 ||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||| |||| Sbjct: 8361 agactctagaaatgctggagaagaaagagtgtttccttcagaaaaaggcttctgcagaag 8302 Query: 309 tagaaaaagctaaggattatacaaaagcaaagaacaa 345 | |||| ||||||||| ||||||||||| |||||||| Sbjct: 8301 tcgaaagagctaaggactatacaaaagctaagaacaa 8265 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Minus Query: 529 gagtattgatgacatcgaaaatgcaattgaagaggcgaatgatcaaacagaaaatatgag 588 |||||| |||||||| |||||||| ||||||||||| ||||| || ||||| |||||||| Sbjct: 7177 gagtatcgatgacattgaaaatgccattgaagaggcaaatgaacacacagagaatatgag 7118 Query: 589 acagatacaggaagcactggcaacgccagtcggtgcctctgctgattttgacgagg 644 ||||||||||| || || ||||| ||| | || || ||||||||||||||||||| Sbjct: 7117 gcagatacaggaggcccttgcaacaccaattggcgcttctgctgattttgacgagg 7062 Score = 101 bits (51), Expect = 5e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 350 gctgcaattcagtgtttaaagaaaaaaaagttgtacgaaacacaaattgagcagctagca 409 ||||||||||| ||| |||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 7741 gctgcaattcaatgtctaaagaaaaagaagttgtatgaaacacagattgagcagctagca 7682 Query: 410 aattttcaattgcgagttcatgatcag 436 || || ||||| || |||||||||||| Sbjct: 7681 aacttccaattacgggttcatgatcag 7655