BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112n08 (1279 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT831108.1| Oryza sativa (indica cultivar-group) cDNA clone:... 547 e-152 ref|NM_001051843.1| Oryza sativa (japonica cultivar-group) Os01g... 547 e-152 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 547 e-152 dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic D... 547 e-152 dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 547 e-152 >emb|CT831108.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN065N23, full insert sequence Length = 1416 Score = 547 bits (276), Expect = e-152 Identities = 392/430 (91%), Gaps = 3/430 (0%) Strand = Plus / Plus Query: 79 ggccatggcgcagaggacgctagagctgacgctgatctcggcgaaggatctcaaggacgt 138 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 116 ggccatggcgcagaggacgctggagctgacgctgatctcggccaaggatctcaaggacgt 175 Query: 139 gaacctgctctccaagatggaggtctacgccgtcgtctcgttctccggcgacccccgatc 198 |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 176 gaacctcctctccaagatggaggtctacgccgtcgtctcgctctccggcgaccgccgctc 235 Query: 199 gcgccagcggatcgctgcagaccgcaccggcggccgcaaccccacctggaacgccaccc- 257 ||| ||||||||||| | |||||| |||| ||||||||||| | ||||||||| ||| Sbjct: 236 gcggcagcggatcgccaccgaccgcgccggtggccgcaacccggcgtggaacgccgcccc 295 Query: 258 --tccgcttcactgtcccggcctccggcgccgggtccctccacgtcctcctccgcgccga 315 |||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 296 gctccggttcaccgtcccggcctccggcgcgggttccctccacgtcctcctccgcgccga 355 Query: 316 gcgcgccctcggcgaccgcgacgtcggtgaggtccacatccccctctccgagctcctctc 375 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 356 gcgcgccctcggcgaccgcgacgtcggcgaggtccacatccccctctcggagctcctctc 415 Query: 376 cggcgcccccgacggcctcctccccgtcaagttcgtcgcctaccaggtccgcaggatctc 435 |||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| Sbjct: 416 cggcgcccccgacggcgccgtccccgccaagttcgtctcctaccaggtccgcaagatctc 475 Query: 436 atccggcaagcctcagggggtcctcaatttctcctacaagctcggtgaggtaacccaatc 495 ||||| ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 476 ctccgggaagccacagggcgtcctcaatttctcctacaagatcggcgaggtaacccaatc 535 Query: 496 cggcgcctac 505 |||| ||||| Sbjct: 536 cggctcctac 545 Score = 151 bits (76), Expect = 8e-33 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 935 ccgccgcaggctgggtacggc---taccagcagcaggccgcgaagccaccgaagaagaac 991 ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 997 ccgccgcaggctgggtacggcggctaccagcagcaggccgtgaagccggcgaagaagaac 1056 Query: 992 aacttcgggatgggtctcggagccgggcttctcggaggcgcgctcggcgggctcctgatc 1051 |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 1057 aacttcgggatgggactcggagccgggctgctcggcggcgcgctcggcggcctcctcatc 1116 Query: 1052 gg 1053 || Sbjct: 1117 gg 1118 Score = 141 bits (71), Expect = 8e-30 Identities = 147/173 (84%), Gaps = 12/173 (6%) Strand = Plus / Plus Query: 755 aagccggcgaaggcgggcgagccggtgacggcctacccggccgccgccgggccgagcacc 814 ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 805 aagccggcgaaggcgggtgagccggtgacggcgtacccagccgccgcggggccgagcacc 864 Query: 815 gccacgccatacgg---tgccccgccgcagcagtacgggtacgggtacccagcccagcag 871 ||| |||||||||| || || |||| ||||||||| ||||||||||| ||||||| | Sbjct: 865 gccgcgccatacggcacggcgccaccgccgcagtacggctacgggtacccggcccagccg 924 Query: 872 ccg---------gctggctacggctacccacccccgccgccgcaagctgggta 915 ||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 925 ccgccgccgcaagccggctacggctacccacccccgccgccgcaagccgggta 977 >ref|NM_001051843.1| Oryza sativa (japonica cultivar-group) Os01g0934100 (Os01g0934100) mRNA, complete cds Length = 1371 Score = 547 bits (276), Expect = e-152 Identities = 392/430 (91%), Gaps = 3/430 (0%) Strand = Plus / Plus Query: 79 ggccatggcgcagaggacgctagagctgacgctgatctcggcgaaggatctcaaggacgt 138 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 113 ggccatggcgcagaggacgctggagctgacgctgatctcggccaaggatctcaaggacgt 172 Query: 139 gaacctgctctccaagatggaggtctacgccgtcgtctcgttctccggcgacccccgatc 198 |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 173 gaacctcctctccaagatggaggtctacgccgtcgtctcgctctccggcgaccgccgctc 232 Query: 199 gcgccagcggatcgctgcagaccgcaccggcggccgcaaccccacctggaacgccaccc- 257 ||| ||||||||||| | |||||| |||| ||||||||||| | ||||||||| ||| Sbjct: 233 gcggcagcggatcgccaccgaccgcgccggtggccgcaacccggcgtggaacgccgcccc 292 Query: 258 --tccgcttcactgtcccggcctccggcgccgggtccctccacgtcctcctccgcgccga 315 |||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 293 gctccggttcaccgtcccggcctccggcgcgggttccctccacgtcctcctccgcgccga 352 Query: 316 gcgcgccctcggcgaccgcgacgtcggtgaggtccacatccccctctccgagctcctctc 375 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 353 gcgcgccctcggcgaccgcgacgtcggcgaggtccacatccccctctcggagctcctctc 412 Query: 376 cggcgcccccgacggcctcctccccgtcaagttcgtcgcctaccaggtccgcaggatctc 435 |||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| Sbjct: 413 cggcgcccccgacggcgccgtccccgccaagttcgtctcctaccaggtccgcaagatctc 472 Query: 436 atccggcaagcctcagggggtcctcaatttctcctacaagctcggtgaggtaacccaatc 495 ||||| ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 473 ctccgggaagccacagggcgtcctcaatttctcctacaagatcggcgaggtaacccaatc 532 Query: 496 cggcgcctac 505 |||| ||||| Sbjct: 533 cggctcctac 542 Score = 151 bits (76), Expect = 8e-33 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 935 ccgccgcaggctgggtacggc---taccagcagcaggccgcgaagccaccgaagaagaac 991 ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 993 ccgccgcaggctgggtacggcggctaccagcagcaggccgtgaagccggcgaagaagaac 1052 Query: 992 aacttcgggatgggtctcggagccgggcttctcggaggcgcgctcggcgggctcctgatc 1051 |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 1053 aacttcgggatgggactcggagccgggctgctcggcggcgcgctcggcggcctcctcatc 1112 Query: 1052 gg 1053 || Sbjct: 1113 gg 1114 Score = 137 bits (69), Expect = 1e-28 Identities = 142/167 (85%), Gaps = 12/167 (7%) Strand = Plus / Plus Query: 755 aagccggcgaaggcgggcgagccggtgacggcctacccggccgccgccgggccgagcacc 814 ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 801 aagccggcgaaggcgggtgagccggtgacggcgtacccagccgccgcggggccgagcacc 860 Query: 815 gccacgccatacgg---tgccccgccgcagcagtacgggtacgggtacccagcccagcag 871 ||| |||||||||| || || |||| ||||||||| ||||||||||| ||||||| | Sbjct: 861 gccgcgccatacggcacggcgccaccgccgcagtacggctacgggtacccggcccagccg 920 Query: 872 ccg---------gctggctacggctacccacccccgccgccgcaagc 909 ||| || |||||||||||||||||||||||||||||||| Sbjct: 921 ccgccgccgcaagccggctacggctacccacccccgccgccgcaagc 967 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 547 bits (276), Expect = e-152 Identities = 392/430 (91%), Gaps = 3/430 (0%) Strand = Plus / Minus Query: 79 ggccatggcgcagaggacgctagagctgacgctgatctcggcgaaggatctcaaggacgt 138 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 40967027 ggccatggcgcagaggacgctggagctgacgctgatctcggccaaggatctcaaggacgt 40966968 Query: 139 gaacctgctctccaagatggaggtctacgccgtcgtctcgttctccggcgacccccgatc 198 |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 40966967 gaacctcctctccaagatggaggtctacgccgtcgtctcgctctccggcgaccgccgctc 40966908 Query: 199 gcgccagcggatcgctgcagaccgcaccggcggccgcaaccccacctggaacgccaccc- 257 ||| ||||||||||| | |||||| |||| ||||||||||| | ||||||||| ||| Sbjct: 40966907 gcggcagcggatcgccaccgaccgcgccggtggccgcaacccggcgtggaacgccgcccc 40966848 Query: 258 --tccgcttcactgtcccggcctccggcgccgggtccctccacgtcctcctccgcgccga 315 |||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 40966847 gctccggttcaccgtcccggcctccggcgcgggttccctccacgtcctcctccgcgccga 40966788 Query: 316 gcgcgccctcggcgaccgcgacgtcggtgaggtccacatccccctctccgagctcctctc 375 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 40966787 gcgcgccctcggcgaccgcgacgtcggcgaggtccacatccccctctcggagctcctctc 40966728 Query: 376 cggcgcccccgacggcctcctccccgtcaagttcgtcgcctaccaggtccgcaggatctc 435 |||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| Sbjct: 40966727 cggcgcccccgacggcgccgtccccgccaagttcgtctcctaccaggtccgcaagatctc 40966668 Query: 436 atccggcaagcctcagggggtcctcaatttctcctacaagctcggtgaggtaacccaatc 495 ||||| ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 40966667 ctccgggaagccacagggcgtcctcaatttctcctacaagatcggcgaggtaacccaatc 40966608 Query: 496 cggcgcctac 505 |||| ||||| Sbjct: 40966607 cggctcctac 40966598 Score = 151 bits (76), Expect = 8e-33 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 935 ccgccgcaggctgggtacggc---taccagcagcaggccgcgaagccaccgaagaagaac 991 ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 40966147 ccgccgcaggctgggtacggcggctaccagcagcaggccgtgaagccggcgaagaagaac 40966088 Query: 992 aacttcgggatgggtctcggagccgggcttctcggaggcgcgctcggcgggctcctgatc 1051 |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 40966087 aacttcgggatgggactcggagccgggctgctcggcggcgcgctcggcggcctcctcatc 40966028 Query: 1052 gg 1053 || Sbjct: 40966027 gg 40966026 Score = 137 bits (69), Expect = 1e-28 Identities = 142/167 (85%), Gaps = 12/167 (7%) Strand = Plus / Minus Query: 755 aagccggcgaaggcgggcgagccggtgacggcctacccggccgccgccgggccgagcacc 814 ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 40966339 aagccggcgaaggcgggtgagccggtgacggcgtacccagccgccgcggggccgagcacc 40966280 Query: 815 gccacgccatacgg---tgccccgccgcagcagtacgggtacgggtacccagcccagcag 871 ||| |||||||||| || || |||| ||||||||| ||||||||||| ||||||| | Sbjct: 40966279 gccgcgccatacggcacggcgccaccgccgcagtacggctacgggtacccggcccagccg 40966220 Query: 872 ccg---------gctggctacggctacccacccccgccgccgcaagc 909 ||| || |||||||||||||||||||||||||||||||| Sbjct: 40966219 ccgccgccgcaagccggctacggctacccacccccgccgccgcaagc 40966173 >dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 547 bits (276), Expect = e-152 Identities = 392/430 (91%), Gaps = 3/430 (0%) Strand = Plus / Minus Query: 79 ggccatggcgcagaggacgctagagctgacgctgatctcggcgaaggatctcaaggacgt 138 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 3957 ggccatggcgcagaggacgctggagctgacgctgatctcggccaaggatctcaaggacgt 3898 Query: 139 gaacctgctctccaagatggaggtctacgccgtcgtctcgttctccggcgacccccgatc 198 |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 3897 gaacctcctctccaagatggaggtctacgccgtcgtctcgctctccggcgaccgccgctc 3838 Query: 199 gcgccagcggatcgctgcagaccgcaccggcggccgcaaccccacctggaacgccaccc- 257 ||| ||||||||||| | |||||| |||| ||||||||||| | ||||||||| ||| Sbjct: 3837 gcggcagcggatcgccaccgaccgcgccggtggccgcaacccggcgtggaacgccgcccc 3778 Query: 258 --tccgcttcactgtcccggcctccggcgccgggtccctccacgtcctcctccgcgccga 315 |||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 3777 gctccggttcaccgtcccggcctccggcgcgggttccctccacgtcctcctccgcgccga 3718 Query: 316 gcgcgccctcggcgaccgcgacgtcggtgaggtccacatccccctctccgagctcctctc 375 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 3717 gcgcgccctcggcgaccgcgacgtcggcgaggtccacatccccctctcggagctcctctc 3658 Query: 376 cggcgcccccgacggcctcctccccgtcaagttcgtcgcctaccaggtccgcaggatctc 435 |||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| Sbjct: 3657 cggcgcccccgacggcgccgtccccgccaagttcgtctcctaccaggtccgcaagatctc 3598 Query: 436 atccggcaagcctcagggggtcctcaatttctcctacaagctcggtgaggtaacccaatc 495 ||||| ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 3597 ctccgggaagccacagggcgtcctcaatttctcctacaagatcggcgaggtaacccaatc 3538 Query: 496 cggcgcctac 505 |||| ||||| Sbjct: 3537 cggctcctac 3528 Score = 151 bits (76), Expect = 8e-33 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 935 ccgccgcaggctgggtacggc---taccagcagcaggccgcgaagccaccgaagaagaac 991 ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 3077 ccgccgcaggctgggtacggcggctaccagcagcaggccgtgaagccggcgaagaagaac 3018 Query: 992 aacttcgggatgggtctcggagccgggcttctcggaggcgcgctcggcgggctcctgatc 1051 |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 3017 aacttcgggatgggactcggagccgggctgctcggcggcgcgctcggcggcctcctcatc 2958 Query: 1052 gg 1053 || Sbjct: 2957 gg 2956 Score = 137 bits (69), Expect = 1e-28 Identities = 142/167 (85%), Gaps = 12/167 (7%) Strand = Plus / Minus Query: 755 aagccggcgaaggcgggcgagccggtgacggcctacccggccgccgccgggccgagcacc 814 ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 3269 aagccggcgaaggcgggtgagccggtgacggcgtacccagccgccgcggggccgagcacc 3210 Query: 815 gccacgccatacgg---tgccccgccgcagcagtacgggtacgggtacccagcccagcag 871 ||| |||||||||| || || |||| ||||||||| ||||||||||| ||||||| | Sbjct: 3209 gccgcgccatacggcacggcgccaccgccgcagtacggctacgggtacccggcccagccg 3150 Query: 872 ccg---------gctggctacggctacccacccccgccgccgcaagc 909 ||| || |||||||||||||||||||||||||||||||| Sbjct: 3149 ccgccgccgcaagccggctacggctacccacccccgccgccgcaagc 3103 >dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 547 bits (276), Expect = e-152 Identities = 392/430 (91%), Gaps = 3/430 (0%) Strand = Plus / Minus Query: 79 ggccatggcgcagaggacgctagagctgacgctgatctcggcgaaggatctcaaggacgt 138 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95452 ggccatggcgcagaggacgctggagctgacgctgatctcggccaaggatctcaaggacgt 95393 Query: 139 gaacctgctctccaagatggaggtctacgccgtcgtctcgttctccggcgacccccgatc 198 |||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| || Sbjct: 95392 gaacctcctctccaagatggaggtctacgccgtcgtctcgctctccggcgaccgccgctc 95333 Query: 199 gcgccagcggatcgctgcagaccgcaccggcggccgcaaccccacctggaacgccaccc- 257 ||| ||||||||||| | |||||| |||| ||||||||||| | ||||||||| ||| Sbjct: 95332 gcggcagcggatcgccaccgaccgcgccggtggccgcaacccggcgtggaacgccgcccc 95273 Query: 258 --tccgcttcactgtcccggcctccggcgccgggtccctccacgtcctcctccgcgccga 315 |||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 95272 gctccggttcaccgtcccggcctccggcgcgggttccctccacgtcctcctccgcgccga 95213 Query: 316 gcgcgccctcggcgaccgcgacgtcggtgaggtccacatccccctctccgagctcctctc 375 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 95212 gcgcgccctcggcgaccgcgacgtcggcgaggtccacatccccctctcggagctcctctc 95153 Query: 376 cggcgcccccgacggcctcctccccgtcaagttcgtcgcctaccaggtccgcaggatctc 435 |||||||||||||||| | |||||| |||||||||| ||||||||||||||| |||||| Sbjct: 95152 cggcgcccccgacggcgccgtccccgccaagttcgtctcctaccaggtccgcaagatctc 95093 Query: 436 atccggcaagcctcagggggtcctcaatttctcctacaagctcggtgaggtaacccaatc 495 ||||| ||||| ||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct: 95092 ctccgggaagccacagggcgtcctcaatttctcctacaagatcggcgaggtaacccaatc 95033 Query: 496 cggcgcctac 505 |||| ||||| Sbjct: 95032 cggctcctac 95023 Score = 151 bits (76), Expect = 8e-33 Identities = 111/122 (90%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 935 ccgccgcaggctgggtacggc---taccagcagcaggccgcgaagccaccgaagaagaac 991 ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 94572 ccgccgcaggctgggtacggcggctaccagcagcaggccgtgaagccggcgaagaagaac 94513 Query: 992 aacttcgggatgggtctcggagccgggcttctcggaggcgcgctcggcgggctcctgatc 1051 |||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 94512 aacttcgggatgggactcggagccgggctgctcggcggcgcgctcggcggcctcctcatc 94453 Query: 1052 gg 1053 || Sbjct: 94452 gg 94451 Score = 137 bits (69), Expect = 1e-28 Identities = 142/167 (85%), Gaps = 12/167 (7%) Strand = Plus / Minus Query: 755 aagccggcgaaggcgggcgagccggtgacggcctacccggccgccgccgggccgagcacc 814 ||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 94764 aagccggcgaaggcgggtgagccggtgacggcgtacccagccgccgcggggccgagcacc 94705 Query: 815 gccacgccatacgg---tgccccgccgcagcagtacgggtacgggtacccagcccagcag 871 ||| |||||||||| || || |||| ||||||||| ||||||||||| ||||||| | Sbjct: 94704 gccgcgccatacggcacggcgccaccgccgcagtacggctacgggtacccggcccagccg 94645 Query: 872 ccg---------gctggctacggctacccacccccgccgccgcaagc 909 ||| || |||||||||||||||||||||||||||||||| Sbjct: 94644 ccgccgccgcaagccggctacggctacccacccccgccgccgcaagc 94598