BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112l03 (992 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241057.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 658 0.0 ref|NM_001057148.1| Oryza sativa (japonica cultivar-group) Os03g... 658 0.0 gb|AY104694.1| Zea mays PCO101015 mRNA sequence 628 e-176 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 180 7e-42 gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic ... 180 7e-42 >dbj|AK241057.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065063O13, full insert sequence Length = 1090 Score = 658 bits (332), Expect = 0.0 Identities = 539/608 (88%) Strand = Plus / Plus Query: 52 atggcttcaaacactggcaagaagctcattcagatcgatgtgagctcggatacagtgtgc 111 |||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 192 atggcttcaaacgctggcaagaagctcattcagatcgatgtgagctctgatacggtgtgc 251 Query: 112 ccttggtgctttgttggaaaacagaacctcgagaaagctatggagcaaaccaagaacaag 171 || ||||||||||| || ||| ||||||||||||||||||||||||||| |||| ||||| Sbjct: 252 ccatggtgctttgtcgggaaaaagaacctcgagaaagctatggagcaaaacaaggacaag 311 Query: 172 ttcgattttgaggttcgttggcatccattctttctaaatcctgatgcgcctaaggaaggc 231 || ||||| ||||| || ||||||||||||||| ||||||| |||| |||||||||||| Sbjct: 312 tttgatttcgaggtccgctggcatccattctttttaaatccgaatgcacctaaggaaggc 371 Query: 232 atcaagaaatcagacttctacaagatgaagtttggccctgttcagtttgagcgtgcaact 291 ||||||||||| || | |||| |||||||||||||||| |||||||||||| ||||||| Sbjct: 372 atcaagaaatctgattactaccggatgaagtttggccctattcagtttgagcatgcaact 431 Query: 292 tctcgcatgacagagatatttcgaggacttgggcttgaatatgacatgtccggtctgacc 351 |||| ||||||||||||||| ||||||||||| | |||||||||||||| || |||| Sbjct: 432 gctcgtatgacagagatatttagaggacttgggatggaatatgacatgtctgggttgact 491 Query: 352 gggaatacaatggacagccataggctcatagcacttgctggacgccaaggctacgacaaa 411 || ||||||||||||||||||||||||||| | |||||||| | |||||| || |||||| Sbjct: 492 ggaaatacaatggacagccataggctcataactcttgctgggcaccaaggttatgacaaa 551 Query: 412 caaaatgctcttgtagaagaattattcctcagttattttgttcagggaaaatatattggt 471 |||| ||||||||| ||||||||||||| ||||| ||| || ||||| | ||||||| Sbjct: 552 caaagtgctcttgttgaagaattattccaaagttacttttgccatggaaagtttattggt 611 Query: 472 gataggcaagttctactggatgctgcgagaaaggtgggcatagaaggagcagaagaactg 531 ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 612 gatcggcaagttctgctggatgctgcaagaaaggtgggcatagaaggagcagaagaactt 671 Query: 532 cttcaagaccctagcaaaggagtggatgaggtccaggaagaactcaacaagtactcctct 591 |||||||| ||| ||||||||| ||||||||| |||||||||||||||| || |||||| Sbjct: 672 cttcaagattctaacaaaggagtcgatgaggtcaaggaagaactcaacaaatattcctct 731 Query: 592 ggaatttctggagttcctcactttgtgatcaatggaaaatatcaactcagtggtggccag 651 ||||||||||| ||||||||||||||||| ||||| |||| ||| ||||| || |||||| Sbjct: 732 ggaatttctggtgttcctcactttgtgataaatgggaaatttcagctcagcggcggccag 791 Query: 652 cctccaaa 659 |||||||| Sbjct: 792 cctccaaa 799 >ref|NM_001057148.1| Oryza sativa (japonica cultivar-group) Os03g0598900 (Os03g0598900) mRNA, complete cds Length = 3162 Score = 658 bits (332), Expect = 0.0 Identities = 539/608 (88%) Strand = Plus / Plus Query: 52 atggcttcaaacactggcaagaagctcattcagatcgatgtgagctcggatacagtgtgc 111 |||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2506 atggcttcaaacgctggcaagaagctcattcagatcgatgtgagctctgatacggtgtgc 2565 Query: 112 ccttggtgctttgttggaaaacagaacctcgagaaagctatggagcaaaccaagaacaag 171 || ||||||||||| || ||| ||||||||||||||||||||||||||| |||| ||||| Sbjct: 2566 ccatggtgctttgtcgggaaaaagaacctcgagaaagctatggagcaaaacaaggacaag 2625 Query: 172 ttcgattttgaggttcgttggcatccattctttctaaatcctgatgcgcctaaggaaggc 231 || ||||| ||||| || ||||||||||||||| ||||||| |||| |||||||||||| Sbjct: 2626 tttgatttcgaggtccgctggcatccattctttttaaatccgaatgcacctaaggaaggc 2685 Query: 232 atcaagaaatcagacttctacaagatgaagtttggccctgttcagtttgagcgtgcaact 291 ||||||||||| || | |||| |||||||||||||||| |||||||||||| ||||||| Sbjct: 2686 atcaagaaatctgattactaccggatgaagtttggccctattcagtttgagcatgcaact 2745 Query: 292 tctcgcatgacagagatatttcgaggacttgggcttgaatatgacatgtccggtctgacc 351 |||| ||||||||||||||| ||||||||||| | |||||||||||||| || |||| Sbjct: 2746 gctcgtatgacagagatatttagaggacttgggatggaatatgacatgtctgggttgact 2805 Query: 352 gggaatacaatggacagccataggctcatagcacttgctggacgccaaggctacgacaaa 411 || ||||||||||||||||||||||||||| | |||||||| | |||||| || |||||| Sbjct: 2806 ggaaatacaatggacagccataggctcataactcttgctgggcaccaaggttatgacaaa 2865 Query: 412 caaaatgctcttgtagaagaattattcctcagttattttgttcagggaaaatatattggt 471 |||| ||||||||| ||||||||||||| ||||| ||| || ||||| | ||||||| Sbjct: 2866 caaagtgctcttgttgaagaattattccaaagttacttttgccatggaaagtttattggt 2925 Query: 472 gataggcaagttctactggatgctgcgagaaaggtgggcatagaaggagcagaagaactg 531 ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2926 gatcggcaagttctgctggatgctgcaagaaaggtgggcatagaaggagcagaagaactt 2985 Query: 532 cttcaagaccctagcaaaggagtggatgaggtccaggaagaactcaacaagtactcctct 591 |||||||| ||| ||||||||| ||||||||| |||||||||||||||| || |||||| Sbjct: 2986 cttcaagattctaacaaaggagtcgatgaggtcaaggaagaactcaacaaatattcctct 3045 Query: 592 ggaatttctggagttcctcactttgtgatcaatggaaaatatcaactcagtggtggccag 651 ||||||||||| ||||||||||||||||| ||||| |||| ||| ||||| || |||||| Sbjct: 3046 ggaatttctggtgttcctcactttgtgataaatgggaaatttcagctcagcggcggccag 3105 Query: 652 cctccaaa 659 |||||||| Sbjct: 3106 cctccaaa 3113 >gb|AY104694.1| Zea mays PCO101015 mRNA sequence Length = 1197 Score = 628 bits (317), Expect = e-176 Identities = 587/677 (86%) Strand = Plus / Plus Query: 31 gctctcaggtgtgcaaaatttatggcttcaaacactggcaagaagctcattcagatcgat 90 |||| |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| Sbjct: 171 gctcccaggtgtgcaaaatccatggcttcagacactggcaagaagctcatccagatcgat 230 Query: 91 gtgagctcggatacagtgtgcccttggtgctttgttggaaaacagaacctcgagaaagct 150 ||||||||||| ||||| ||||||||||||||||| || ||| |||||||||||||||| Sbjct: 231 gtgagctcggacacagtatgcccttggtgctttgtcggcaaaaagaacctcgagaaagcg 290 Query: 151 atggagcaaaccaagaacaagttcgattttgaggttcgttggcatccattctttctaaat 210 |||||||||| || | ||||||| || || ||||| || |||||||| ||||||||||| Sbjct: 291 atggagcaaagcagggacaagtttgacttcgaggtccgctggcatccgttctttctaaac 350 Query: 211 cctgatgcgcctaaggaaggcatcaagaaatcagacttctacaagatgaagtttggccct 270 ||||||||||||||||| ||| ||| |||||| |||||||||||| ||||||||| ||| Sbjct: 351 cctgatgcgcctaaggagggcgtcaggaaatctgacttctacaaggcgaagtttggtcct 410 Query: 271 gttcagtttgagcgtgcaacttctcgcatgacagagatatttcgaggacttgggcttgaa 330 ||||||| |||||||| | |||||||||| | ||||||||||||||||| |||||||| Sbjct: 411 gttcagtatgagcgtgtcatttctcgcatggccgagatatttcgaggactcgggcttgag 470 Query: 331 tatgacatgtccggtctgaccgggaatacaatggacagccataggctcatagcacttgct 390 ||||||||||| || ||||| ||| |||| ||||| || ||||||||||||||||||||| Sbjct: 471 tatgacatgtcggggctgacaggggatacgatggatagtcataggctcatagcacttgct 530 Query: 391 ggacgccaaggctacgacaaacaaaatgctcttgtagaagaattattcctcagttatttt 450 |||| ||||||||| ||||| |||||||||||||| | |||||||||||| | ||| ||| Sbjct: 531 ggacaccaaggctatgacaagcaaaatgctcttgttggagaattattccttaattacttt 590 Query: 451 gttcagggaaaatatattggtgataggcaagttctactggatgctgcgagaaaggtgggc 510 | | ||||| ||||||||||| | ||| ||| | ||||| ||||| |||||||||||| Sbjct: 591 tgtgaaggaaagtatattggtgacaagcaggttttgctggacgctgcaagaaaggtgggc 650 Query: 511 atagaaggagcagaagaactgcttcaagaccctagcaaaggagtggatgaggtccaggaa 570 |||||||| || ||||||||| |||||||||||| ||||||||| |||||||| |||||| Sbjct: 651 atagaaggggccgaagaactgtttcaagaccctaccaaaggagtcgatgaggttcaggaa 710 Query: 571 gaactcaacaagtactcctctggaatttctggagttcctcactttgtgatcaatggaaaa 630 |||||||| ||||| || ||||| || || || || || || ||||||||||||| ||| Sbjct: 711 gaactcaagaagtattcatctggcatctccggggtaccacattttgtgatcaatgataaa 770 Query: 631 tatcaactcagtggtggccagcctccaaacatatttatgagggccttcgaggcggctgca 690 ||||||||||||||||||||||||||||| |||| |||||||| || ||| ||||||| Sbjct: 771 tatcaactcagtggtggccagcctccaaatgtattcatgagggcgtttgagatggctgca 830 Query: 691 aaagacggagctgaatg 707 ||||| |||||| |||| Sbjct: 831 aaagatggagcttaatg 847 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 180 bits (91), Expect = 7e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 52 atggcttcaaacactggcaagaagctcattcagatcgatgtgagctcggatacagtgtgc 111 |||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 22144209 atggcttcaaacgctggcaagaagctcattcagatcgatgtgagctctgatacggtgtgc 22144150 Query: 112 ccttggtgctttgttggaaaacagaacctcgagaaagctatggagcaaaccaagaacaag 171 || ||||||||||| || ||| ||||||||||||||||||||||||||| |||| ||||| Sbjct: 22144149 ccatggtgctttgtcgggaaaaagaacctcgagaaagctatggagcaaaacaaggacaag 22144090 Query: 172 ttcgattttgaggtt 186 || ||||| |||||| Sbjct: 22144089 tttgatttcgaggtt 22144075 Score = 129 bits (65), Expect = 2e-26 Identities = 104/117 (88%) Strand = Plus / Minus Query: 190 tggcatccattctttctaaatcctgatgcgcctaaggaaggcatcaagaaatcagacttc 249 ||||||||||||||| ||||||| |||| ||||||||||||||||||||||| || | | Sbjct: 22143993 tggcatccattctttttaaatccgaatgcacctaaggaaggcatcaagaaatctgattac 22143934 Query: 250 tacaagatgaagtttggccctgttcagtttgagcgtgcaacttctcgcatgacagag 306 ||| |||||||||||||||| |||||||||||| ||||||| |||| ||||||||| Sbjct: 22143933 taccggatgaagtttggccctattcagtttgagcatgcaactgctcgtatgacagag 22143877 Score = 121 bits (61), Expect = 6e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 475 aggcaagttctactggatgctgcgagaaaggtgggcatagaaggagcagaagaactgctt 534 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 22142707 aggcaagttctgctggatgctgcaagaaaggtgggcatagaaggagcagaagaacttctt 22142648 Query: 535 caagaccctagcaaaggagtggatgaggt 563 ||||| ||| ||||||||| |||||||| Sbjct: 22142647 caagattctaacaaaggagtcgatgaggt 22142619 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 355 aatacaatggacagccataggctcatagcacttgctggacgccaaggctacgacaaacaa 414 ||||||||||||||||||||||||||| | |||||||| | |||||| || ||||||||| Sbjct: 22143673 aatacaatggacagccataggctcataactcttgctgggcaccaaggttatgacaaacaa 22143614 Query: 415 aatgctcttgtagaagaattattcc 439 | ||||||||| ||||||||||||| Sbjct: 22143613 agtgctcttgttgaagaattattcc 22143589 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 560 aggtccaggaagaactcaacaagtactcctctggaatttctggagttcctcactttgtg 618 ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 22142529 aggtcaaggaagaactcaacaaatattcctctggaatttctggtgttcctcactttgtg 22142471 >gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 180 bits (91), Expect = 7e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 52 atggcttcaaacactggcaagaagctcattcagatcgatgtgagctcggatacagtgtgc 111 |||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 73682 atggcttcaaacgctggcaagaagctcattcagatcgatgtgagctctgatacggtgtgc 73741 Query: 112 ccttggtgctttgttggaaaacagaacctcgagaaagctatggagcaaaccaagaacaag 171 || ||||||||||| || ||| ||||||||||||||||||||||||||| |||| ||||| Sbjct: 73742 ccatggtgctttgtcgggaaaaagaacctcgagaaagctatggagcaaaacaaggacaag 73801 Query: 172 ttcgattttgaggtt 186 || ||||| |||||| Sbjct: 73802 tttgatttcgaggtt 73816 Score = 129 bits (65), Expect = 2e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 190 tggcatccattctttctaaatcctgatgcgcctaaggaaggcatcaagaaatcagacttc 249 ||||||||||||||| ||||||| |||| ||||||||||||||||||||||| || | | Sbjct: 73898 tggcatccattctttttaaatccgaatgcacctaaggaaggcatcaagaaatctgattac 73957 Query: 250 tacaagatgaagtttggccctgttcagtttgagcgtgcaacttctcgcatgacagag 306 ||| |||||||||||||||| |||||||||||| ||||||| |||| ||||||||| Sbjct: 73958 taccggatgaagtttggccctattcagtttgagcatgcaactgctcgtatgacagag 74014 Score = 121 bits (61), Expect = 6e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 475 aggcaagttctactggatgctgcgagaaaggtgggcatagaaggagcagaagaactgctt 534 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 75184 aggcaagttctgctggatgctgcaagaaaggtgggcatagaaggagcagaagaacttctt 75243 Query: 535 caagaccctagcaaaggagtggatgaggt 563 ||||| ||| ||||||||| |||||||| Sbjct: 75244 caagattctaacaaaggagtcgatgaggt 75272 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 355 aatacaatggacagccataggctcatagcacttgctggacgccaaggctacgacaaacaa 414 ||||||||||||||||||||||||||| | |||||||| | |||||| || ||||||||| Sbjct: 74218 aatacaatggacagccataggctcataactcttgctgggcaccaaggttatgacaaacaa 74277 Query: 415 aatgctcttgtagaagaattattcc 439 | ||||||||| ||||||||||||| Sbjct: 74278 agtgctcttgttgaagaattattcc 74302 Score = 85.7 bits (43), Expect = 3e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 560 aggtccaggaagaactcaacaagtactcctctggaatttctggagttcctcactttgtg 618 ||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 75362 aggtcaaggaagaactcaacaaatattcctctggaatttctggtgttcctcactttgtg 75420