BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112j23 (1068 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835459.1| Oryza sativa (indica cultivar-group) cDNA clone:... 218 4e-53 emb|CT835497.1| Oryza sativa (indica cultivar-group) cDNA clone:... 208 3e-50 ref|NM_001052972.1| Oryza sativa (japonica cultivar-group) Os02g... 208 3e-50 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 208 3e-50 dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 208 3e-50 >emb|CT835459.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN017B21, full insert sequence Length = 1048 Score = 218 bits (110), Expect = 4e-53 Identities = 211/243 (86%), Gaps = 5/243 (2%) Strand = Plus / Plus Query: 436 cggcgaggaagagggccggcggaggggggctcgataaggcggcgctcgcggccatgcctg 495 ||||||||||||||| |||||| || || ||||| ||||||||||| |||||||| || | Sbjct: 377 cggcgaggaagaggggcggcggcggcggcctcgacaaggcggcgctggcggccatcccgg 436 Query: 496 tgttcaggttcaaggcggaggcgggggcgatgccggtggagtgcgcggtgtgcctgagcg 555 ||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 437 tgttcaggttcaaggcgtcggcggcggcgaggc----ggagtgcgcggtgtgcctgagcg 492 Query: 556 ccatgcaggacggggaccgcggtgcgcacgctgaccgggtgcaagcacgcgttccacgtc 615 |||||||||||| ||| ||||||||| ||||| ||||||||| ||||| ||||||| | Sbjct: 493 gcatgcaggacggcgac-gcggtgcgcgcgctgcccgggtgcagccacgccttccacgcc 551 Query: 616 gggtgcgtctacacctggctctgcgcacactccacctgccccgtctgccgcgcgcgcccc 675 || |||||| || |||||||| |||| ||| |||||||||||||||||||||||||||| Sbjct: 552 ggctgcgtcgacgcctggctccgcgcccacggcacctgccccgtctgccgcgcgcgcccc 611 Query: 676 gcc 678 ||| Sbjct: 612 gcc 614 Score = 208 bits (105), Expect = 3e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 267 ggcggcggaggaggggggtgctgcagctccggcgcgactctggagctcgtgggggtgttc 326 |||||||| |||||||||||||||||||| |||| ||| ||||||||||| || | |||| Sbjct: 193 ggcggcggtggaggggggtgctgcagctcaggcgtgacgctggagctcgtcggcgcgttc 252 Query: 327 acggcggtgtgcctggtgctgtacggggtgatactgtacctcaactacctgtacgtgcgg 386 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 253 acggcggtgtgcctggtgctgtacggggtgatactctacttcaactacctgtacgtgcgg 312 Query: 387 tggagcgggcgcgatggcgtgcaccggac 415 |||||||| ||||| |||||||||||||| Sbjct: 313 tggagcggccgcgacggcgtgcaccggac 341 >emb|CT835497.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN074I11, full insert sequence Length = 823 Score = 208 bits (105), Expect = 3e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 267 ggcggcggaggaggggggtgctgcagctccggcgcgactctggagctcgtgggggtgttc 326 |||||||| |||||||||||||||||||| |||| ||| ||||||||||| || | |||| Sbjct: 102 ggcggcggtggaggggggtgctgcagctcaggcgtgacgctggagctcgtcggcgcgttc 161 Query: 327 acggcggtgtgcctggtgctgtacggggtgatactgtacctcaactacctgtacgtgcgg 386 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 162 acggcggtgtgcctggtgctgtacggggtgatactctacttcaactacctgtacgtgcgg 221 Query: 387 tggagcgggcgcgatggcgtgcaccggac 415 |||||||| ||||| |||||||||||||| Sbjct: 222 tggagcggccgcgacggcgtgcaccggac 250 Score = 155 bits (78), Expect = 4e-34 Identities = 130/146 (89%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 533 ggagtgcgcggtgtgcctgagcgccatgcaggacggggaccgcggtgcgcacgctgaccg 592 ||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||| ||| Sbjct: 398 ggagtgcgcggtgtgcctgagcggcatgcaggacggcgac-gcggtgcgcgcgctgcccg 456 Query: 593 ggtgcaagcacgcgttccacgtcgggtgcgtctacacctggctctgcgcacactccacct 652 |||||| ||||| ||||||| ||| |||||| || |||||||| |||| ||| ||||| Sbjct: 457 ggtgcagccacgccttccacgccggctgcgtcgacgcctggctccgcgcccacggcacct 516 Query: 653 gccccgtctgccgcgcgcgccccgcc 678 |||||||||||||||||||||||||| Sbjct: 517 gccccgtctgccgcgcgcgccccgcc 542 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 436 cggcgaggaagagggccggcggaggggggctcgataaggcggcgctcgcggccatgcctg 495 ||||||||||||||| |||||| || || ||||| ||||||||||| |||||||| || | Sbjct: 286 cggcgaggaagaggggcggcggcggcggcctcgacaaggcggcgctggcggccatcccgg 345 Query: 496 tgttcaggttcaaggcg 512 ||||||||||||||||| Sbjct: 346 tgttcaggttcaaggcg 362 >ref|NM_001052972.1| Oryza sativa (japonica cultivar-group) Os02g0249300 (Os02g0249300) mRNA, complete cds Length = 600 Score = 208 bits (105), Expect = 3e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 267 ggcggcggaggaggggggtgctgcagctccggcgcgactctggagctcgtgggggtgttc 326 |||||||| |||||||||||||||||||| |||| ||| ||||||||||| || | |||| Sbjct: 58 ggcggcggtggaggggggtgctgcagctcaggcgtgacgctggagctcgtcggcgcgttc 117 Query: 327 acggcggtgtgcctggtgctgtacggggtgatactgtacctcaactacctgtacgtgcgg 386 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 118 acggcggtgtgcctggtgctgtacggggtgatactctacttcaactacctgtacgtgcgg 177 Query: 387 tggagcgggcgcgatggcgtgcaccggac 415 |||||||| ||||| |||||||||||||| Sbjct: 178 tggagcggccgcgacggcgtgcaccggac 206 Score = 147 bits (74), Expect = 1e-31 Identities = 129/146 (88%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 533 ggagtgcgcggtgtgcctgagcgccatgcaggacggggaccgcggtgcgcacgctgaccg 592 ||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||| ||| Sbjct: 354 ggagtgcgcggtgtgcctgagcggcatgcaggacggcgac-gcggtgcgcgcgctgcccg 412 Query: 593 ggtgcaagcacgcgttccacgtcgggtgcgtctacacctggctctgcgcacactccacct 652 ||||| ||||| ||||||| ||| |||||| || |||||||| |||| ||| ||||| Sbjct: 413 ggtgcggccacgccttccacgccggctgcgtcgacgcctggctccgcgcccacggcacct 472 Query: 653 gccccgtctgccgcgcgcgccccgcc 678 |||||||||||||||||||||||||| Sbjct: 473 gccccgtctgccgcgcgcgccccgcc 498 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 436 cggcgaggaagagggccggcggaggggggctcgataaggcggcgctcgcggccatgcctg 495 ||||||||||||||| |||||| || || ||||| ||||||||||| |||||||| || | Sbjct: 242 cggcgaggaagaggggcggcggcggcggcctcgacaaggcggcgctggcggccattccgg 301 Query: 496 tgttcaggttcaaggcg 512 ||||||||||||||||| Sbjct: 302 tgttcaggttcaaggcg 318 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 208 bits (105), Expect = 3e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 267 ggcggcggaggaggggggtgctgcagctccggcgcgactctggagctcgtgggggtgttc 326 |||||||| |||||||||||||||||||| |||| ||| ||||||||||| || | |||| Sbjct: 8422081 ggcggcggtggaggggggtgctgcagctcaggcgtgacgctggagctcgtcggcgcgttc 8422140 Query: 327 acggcggtgtgcctggtgctgtacggggtgatactgtacctcaactacctgtacgtgcgg 386 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 8422141 acggcggtgtgcctggtgctgtacggggtgatactctacttcaactacctgtacgtgcgg 8422200 Query: 387 tggagcgggcgcgatggcgtgcaccggac 415 |||||||| ||||| |||||||||||||| Sbjct: 8422201 tggagcggccgcgacggcgtgcaccggac 8422229 Score = 147 bits (74), Expect = 1e-31 Identities = 129/146 (88%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 533 ggagtgcgcggtgtgcctgagcgccatgcaggacggggaccgcggtgcgcacgctgaccg 592 ||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||| ||| Sbjct: 8422377 ggagtgcgcggtgtgcctgagcggcatgcaggacggcgac-gcggtgcgcgcgctgcccg 8422435 Query: 593 ggtgcaagcacgcgttccacgtcgggtgcgtctacacctggctctgcgcacactccacct 652 ||||| ||||| ||||||| ||| |||||| || |||||||| |||| ||| ||||| Sbjct: 8422436 ggtgcggccacgccttccacgccggctgcgtcgacgcctggctccgcgcccacggcacct 8422495 Query: 653 gccccgtctgccgcgcgcgccccgcc 678 |||||||||||||||||||||||||| Sbjct: 8422496 gccccgtctgccgcgcgcgccccgcc 8422521 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 436 cggcgaggaagagggccggcggaggggggctcgataaggcggcgctcgcggccatgcctg 495 ||||||||||||||| |||||| || || ||||| ||||||||||| |||||||| || | Sbjct: 8422265 cggcgaggaagaggggcggcggcggcggcctcgacaaggcggcgctggcggccattccgg 8422324 Query: 496 tgttcaggttcaaggcg 512 ||||||||||||||||| Sbjct: 8422325 tgttcaggttcaaggcg 8422341 >dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 208 bits (105), Expect = 3e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 267 ggcggcggaggaggggggtgctgcagctccggcgcgactctggagctcgtgggggtgttc 326 |||||||| |||||||||||||||||||| |||| ||| ||||||||||| || | |||| Sbjct: 74931 ggcggcggtggaggggggtgctgcagctcaggcgtgacgctggagctcgtcggcgcgttc 74990 Query: 327 acggcggtgtgcctggtgctgtacggggtgatactgtacctcaactacctgtacgtgcgg 386 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 74991 acggcggtgtgcctggtgctgtacggggtgatactctacttcaactacctgtacgtgcgg 75050 Query: 387 tggagcgggcgcgatggcgtgcaccggac 415 |||||||| ||||| |||||||||||||| Sbjct: 75051 tggagcggccgcgacggcgtgcaccggac 75079 Score = 147 bits (74), Expect = 1e-31 Identities = 129/146 (88%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 533 ggagtgcgcggtgtgcctgagcgccatgcaggacggggaccgcggtgcgcacgctgaccg 592 ||||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||| ||| Sbjct: 75227 ggagtgcgcggtgtgcctgagcggcatgcaggacggcgac-gcggtgcgcgcgctgcccg 75285 Query: 593 ggtgcaagcacgcgttccacgtcgggtgcgtctacacctggctctgcgcacactccacct 652 ||||| ||||| ||||||| ||| |||||| || |||||||| |||| ||| ||||| Sbjct: 75286 ggtgcggccacgccttccacgccggctgcgtcgacgcctggctccgcgcccacggcacct 75345 Query: 653 gccccgtctgccgcgcgcgccccgcc 678 |||||||||||||||||||||||||| Sbjct: 75346 gccccgtctgccgcgcgcgccccgcc 75371 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 436 cggcgaggaagagggccggcggaggggggctcgataaggcggcgctcgcggccatgcctg 495 ||||||||||||||| |||||| || || ||||| ||||||||||| |||||||| || | Sbjct: 75115 cggcgaggaagaggggcggcggcggcggcctcgacaaggcggcgctggcggccattccgg 75174 Query: 496 tgttcaggttcaaggcg 512 ||||||||||||||||| Sbjct: 75175 tgttcaggttcaaggcg 75191