BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112j04 (1175 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001062912.1| Oryza sativa (japonica cultivar-group) Os05g... 379 e-101 gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 379 e-101 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 379 e-101 emb|CT837611.1| Oryza sativa (indica cultivar-group) cDNA clone:... 377 e-101 gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 96 4e-16 >ref|NM_001062912.1| Oryza sativa (japonica cultivar-group) Os05g0572000 (Os05g0572000) mRNA, complete cds Length = 822 Score = 379 bits (191), Expect = e-101 Identities = 317/359 (88%) Strand = Plus / Plus Query: 345 gacgacggagcgccccggaagctgtaccgcggcgtgcggctgcggcagtgggggaaatgg 404 ||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 268 gacgatggcgcgccgcggaagctgtaccgcggcgtgcggcagcggcagtgggggaagtgg 327 Query: 405 gtcgccgaaatccggctcccacagaaccgggtgcgcgtgtggctcggcacgtacgactcg 464 || ||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 328 gtggccgagatcaggctgccgcagaaccgggtgcgcgtgtggctcggcacctacgactcg 387 Query: 465 ccggagaccgccgctcatgcgtacgaccgcgcggcctacaagctgcgcggcgagtacgct 524 |||||||||||||| || || ||||||||||| || | |||||| |||||||||||||| Sbjct: 388 ccggagaccgccgcgcacgcctacgaccgcgccgcgttcaagctccgcggcgagtacgcg 447 Query: 525 cgcctcaacttcccaggagtcatggacggccccgactgcccggacaatctgcggcagctc 584 |||||||||||||| || ||||||||||||| ||||||||| ||||| ||||| || ||| Sbjct: 448 cgcctcaacttccccggcgtcatggacggccgcgactgccccgacaacctgcgccaactc 507 Query: 585 cgcgccgccatcgacgccaagattcaggccatccgcgtccgcctggcgcgcaagcgcgcc 644 |||| |||| ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 508 cgcgacgccgtcgacgccaagatccaggccatccgcgtccgcatggcgcgcaagcgcgcg 567 Query: 645 cgcgcacggcggcagcccgaggagagcaaggagaatccatgcaccgagggcgcgaaggc 703 ||||| || || |||| ||||||||||||| ||| | | || |||||| ||||||||| Sbjct: 568 cgcgcgcgccgccagcgcgaggagagcaagaagagccaacgcgccgaggacgcgaaggc 626 Score = 315 bits (159), Expect = 2e-82 Identities = 195/207 (94%) Strand = Plus / Plus Query: 93 atggacgccagcctccgcacactgtctccggccagcttccccggcgaggtccgctccgcc 152 |||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| Sbjct: 1 atggacgccagcctccgcacactgcctccggcgatcttccccggcgaggtccgctccgcc 60 Query: 153 gtctcctctctcctcctctcccccggcgccagctccctcgacaccgtcttctcccacctc 212 |||||||| ||||||||||| ||||||| |||| ||||||||||||| |||||||||||| Sbjct: 61 gtctcctccctcctcctctctcccggcggcagcgccctcgacaccgtgttctcccacctc 120 Query: 213 ccgccccccgtcaccatcccgccgctcggctccagcgtctacaaccgccagagcgagctc 272 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121 ccgccgcccgtcaccatcccgccgctcggctccagcgtctactaccgccagagcgagctc 180 Query: 273 ctccgccatttcgccgcgtcgcaggcg 299 || ||||| |||||||||||||||||| Sbjct: 181 ctgcgccacttcgccgcgtcgcaggcg 207 Score = 151 bits (76), Expect = 8e-33 Identities = 118/132 (89%) Strand = Plus / Plus Query: 753 acgacgacgtcgtcgtacgggtcaccggacggagttctctccgtgagcgcggcctcagcc 812 |||||| ||||||||||||||||||||||||| || |||||| |||||||||| || | | Sbjct: 691 acgacgtcgtcgtcgtacgggtcaccggacggcgtgctctccatgagcgcggcgtccgtc 750 Query: 813 gacgccgagtgcttgctggaacggatgccgtcgtttgatcccgagttgatctgggagatg 872 |||| ||| ||| ||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 751 gacggcgactgcccgctcgagcggatgccgtcgttcgatcccgagttgatctgggagatg 810 Query: 873 cttaacttctag 884 |||||||||||| Sbjct: 811 cttaacttctag 822 >gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 379 bits (191), Expect = e-101 Identities = 317/359 (88%) Strand = Plus / Minus Query: 345 gacgacggagcgccccggaagctgtaccgcggcgtgcggctgcggcagtgggggaaatgg 404 ||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 64124 gacgatggcgcgccgcggaagctgtaccgcggcgtgcggcagcggcagtgggggaagtgg 64065 Query: 405 gtcgccgaaatccggctcccacagaaccgggtgcgcgtgtggctcggcacgtacgactcg 464 || ||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 64064 gtggccgagatcaggctgccgcagaaccgggtgcgcgtgtggctcggcacctacgactcg 64005 Query: 465 ccggagaccgccgctcatgcgtacgaccgcgcggcctacaagctgcgcggcgagtacgct 524 |||||||||||||| || || ||||||||||| || | |||||| |||||||||||||| Sbjct: 64004 ccggagaccgccgcgcacgcctacgaccgcgccgcgttcaagctccgcggcgagtacgcg 63945 Query: 525 cgcctcaacttcccaggagtcatggacggccccgactgcccggacaatctgcggcagctc 584 |||||||||||||| || ||||||||||||| ||||||||| ||||| ||||| || ||| Sbjct: 63944 cgcctcaacttccccggcgtcatggacggccgcgactgccccgacaacctgcgccaactc 63885 Query: 585 cgcgccgccatcgacgccaagattcaggccatccgcgtccgcctggcgcgcaagcgcgcc 644 |||| |||| ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 63884 cgcgacgccgtcgacgccaagatccaggccatccgcgtccgcatggcgcgcaagcgcgcg 63825 Query: 645 cgcgcacggcggcagcccgaggagagcaaggagaatccatgcaccgagggcgcgaaggc 703 ||||| || || |||| ||||||||||||| ||| | | || |||||| ||||||||| Sbjct: 63824 cgcgcgcgccgccagcgcgaggagagcaagaagagccaacgcgccgaggacgcgaaggc 63766 Score = 319 bits (161), Expect = 1e-83 Identities = 197/209 (94%) Strand = Plus / Minus Query: 91 ccatggacgccagcctccgcacactgtctccggccagcttccccggcgaggtccgctccg 150 |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 64393 ccatggacgccagcctccgcacactgcctccggcgatcttccccggcgaggtccgctccg 64334 Query: 151 ccgtctcctctctcctcctctcccccggcgccagctccctcgacaccgtcttctcccacc 210 |||||||||| ||||||||||| ||||||| |||| ||||||||||||| |||||||||| Sbjct: 64333 ccgtctcctccctcctcctctctcccggcggcagcgccctcgacaccgtgttctcccacc 64274 Query: 211 tcccgccccccgtcaccatcccgccgctcggctccagcgtctacaaccgccagagcgagc 270 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 64273 tcccgccgcccgtcaccatcccgccgctcggctccagcgtctactaccgccagagcgagc 64214 Query: 271 tcctccgccatttcgccgcgtcgcaggcg 299 |||| ||||| |||||||||||||||||| Sbjct: 64213 tcctgcgccacttcgccgcgtcgcaggcg 64185 Score = 170 bits (86), Expect = 8e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 753 acgacgacgtcgtcgtacgggtcaccggacggagttctctccgtgagcgcggcctcagcc 812 |||||| ||||||||||||||||||||||||| || |||||| |||||||||| || | | Sbjct: 63701 acgacgtcgtcgtcgtacgggtcaccggacggcgtgctctccatgagcgcggcgtccgtc 63642 Query: 813 gacgccgagtgcttgctggaacggatgccgtcgtttgatcccgagttgatctgggagatg 872 |||| ||| ||| ||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 63641 gacggcgactgcccgctcgagcggatgccgtcgttcgatcccgagttgatctgggagatg 63582 Query: 873 cttaacttctagctgtatagacggagt-ggaaccatggacacaaaccaac 921 ||||||||||||||| |||| ||||| ||||||||||||| ||||||| Sbjct: 63581 cttaacttctagctgcgtagatggagtacgaaccatggacacgaaccaac 63532 >dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 379 bits (191), Expect = e-101 Identities = 317/359 (88%) Strand = Plus / Minus Query: 345 gacgacggagcgccccggaagctgtaccgcggcgtgcggctgcggcagtgggggaaatgg 404 ||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 28279882 gacgatggcgcgccgcggaagctgtaccgcggcgtgcggcagcggcagtgggggaagtgg 28279823 Query: 405 gtcgccgaaatccggctcccacagaaccgggtgcgcgtgtggctcggcacgtacgactcg 464 || ||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 28279822 gtggccgagatcaggctgccgcagaaccgggtgcgcgtgtggctcggcacctacgactcg 28279763 Query: 465 ccggagaccgccgctcatgcgtacgaccgcgcggcctacaagctgcgcggcgagtacgct 524 |||||||||||||| || || ||||||||||| || | |||||| |||||||||||||| Sbjct: 28279762 ccggagaccgccgcgcacgcctacgaccgcgccgcgttcaagctccgcggcgagtacgcg 28279703 Query: 525 cgcctcaacttcccaggagtcatggacggccccgactgcccggacaatctgcggcagctc 584 |||||||||||||| || ||||||||||||| ||||||||| ||||| ||||| || ||| Sbjct: 28279702 cgcctcaacttccccggcgtcatggacggccgcgactgccccgacaacctgcgccaactc 28279643 Query: 585 cgcgccgccatcgacgccaagattcaggccatccgcgtccgcctggcgcgcaagcgcgcc 644 |||| |||| ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 28279642 cgcgacgccgtcgacgccaagatccaggccatccgcgtccgcatggcgcgcaagcgcgcg 28279583 Query: 645 cgcgcacggcggcagcccgaggagagcaaggagaatccatgcaccgagggcgcgaaggc 703 ||||| || || |||| ||||||||||||| ||| | | || |||||| ||||||||| Sbjct: 28279582 cgcgcgcgccgccagcgcgaggagagcaagaagagccaacgcgccgaggacgcgaaggc 28279524 Score = 319 bits (161), Expect = 1e-83 Identities = 197/209 (94%) Strand = Plus / Minus Query: 91 ccatggacgccagcctccgcacactgtctccggccagcttccccggcgaggtccgctccg 150 |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 28280151 ccatggacgccagcctccgcacactgcctccggcgatcttccccggcgaggtccgctccg 28280092 Query: 151 ccgtctcctctctcctcctctcccccggcgccagctccctcgacaccgtcttctcccacc 210 |||||||||| ||||||||||| ||||||| |||| ||||||||||||| |||||||||| Sbjct: 28280091 ccgtctcctccctcctcctctctcccggcggcagcgccctcgacaccgtgttctcccacc 28280032 Query: 211 tcccgccccccgtcaccatcccgccgctcggctccagcgtctacaaccgccagagcgagc 270 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 28280031 tcccgccgcccgtcaccatcccgccgctcggctccagcgtctactaccgccagagcgagc 28279972 Query: 271 tcctccgccatttcgccgcgtcgcaggcg 299 |||| ||||| |||||||||||||||||| Sbjct: 28279971 tcctgcgccacttcgccgcgtcgcaggcg 28279943 Score = 170 bits (86), Expect = 8e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 753 acgacgacgtcgtcgtacgggtcaccggacggagttctctccgtgagcgcggcctcagcc 812 |||||| ||||||||||||||||||||||||| || |||||| |||||||||| || | | Sbjct: 28279459 acgacgtcgtcgtcgtacgggtcaccggacggcgtgctctccatgagcgcggcgtccgtc 28279400 Query: 813 gacgccgagtgcttgctggaacggatgccgtcgtttgatcccgagttgatctgggagatg 872 |||| ||| ||| ||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 28279399 gacggcgactgcccgctcgagcggatgccgtcgttcgatcccgagttgatctgggagatg 28279340 Query: 873 cttaacttctagctgtatagacggagt-ggaaccatggacacaaaccaac 921 ||||||||||||||| |||| ||||| ||||||||||||| ||||||| Sbjct: 28279339 cttaacttctagctgcgtagatggagtacgaaccatggacacgaaccaac 28279290 >emb|CT837611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA042N08, full insert sequence Length = 1171 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 354 gcgccccggaagctgtaccgcggcgtgcggctgcggcagtgggggaaatgggtcgccgaa 413 ||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| Sbjct: 365 gcgccgcggaagctgtaccgcggcgtgcggcagcggcagtgggggaagtgggtggccgag 424 Query: 414 atccggctcccacagaaccgggtgcgcgtgtggctcggcacgtacgactcgccggagacc 473 ||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 425 atcaggctgccgcagaaccgggtgcgcgtgtggctcggcacctacgactcgccggagacc 484 Query: 474 gccgctcatgcgtacgaccgcgcggcctacaagctgcgcggcgagtacgctcgcctcaac 533 ||||| || || ||||||||||| || | |||||| |||||||||||||| ||||||||| Sbjct: 485 gccgcgcacgcctacgaccgcgccgcgttcaagctccgcggcgagtacgcgcgcctcaac 544 Query: 534 ttcccaggagtcatggacggccccgactgcccggacaatctgcggcagctccgcgccgcc 593 ||||| || ||||||||||||| ||||||||| ||||| ||||| || ||||||| |||| Sbjct: 545 ttccccggcgtcatggacggccgcgactgccccgacaacctgcgccaactccgcgacgcc 604 Query: 594 atcgacgccaagattcaggccatccgcgtccgcctggcgcgcaagcgcgcccgcgcacgg 653 ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| || Sbjct: 605 gtcgacgccaagatccaggccatccgcgtccgcatggcgcgcaagcgcgcgcgcgcgcgc 664 Query: 654 cggcagcccgaggagagcaaggagaatccatgcaccgagggcgcgaaggc 703 || |||| ||||||||||||| ||| | | || |||||| ||||||||| Sbjct: 665 cgccagcgcgaggagagcaagaagagccaacgcgccgaggacgcgaaggc 714 Score = 327 bits (165), Expect = 6e-86 Identities = 198/209 (94%) Strand = Plus / Plus Query: 91 ccatggacgccagcctccgcacactgtctccggccagcttccccggcgaggtccgctccg 150 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 87 ccatggacgccagcctccgcacactgcctccggcgagcttccccggcgaggtccgctccg 146 Query: 151 ccgtctcctctctcctcctctcccccggcgccagctccctcgacaccgtcttctcccacc 210 |||||||||| ||||||||||| ||||||| |||| ||||||||||||| |||||||||| Sbjct: 147 ccgtctcctccctcctcctctctcccggcggcagcgccctcgacaccgtgttctcccacc 206 Query: 211 tcccgccccccgtcaccatcccgccgctcggctccagcgtctacaaccgccagagcgagc 270 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 207 tcccgccgcccgtcaccatcccgccgctcggctccagcgtctactaccgccagagcgagc 266 Query: 271 tcctccgccatttcgccgcgtcgcaggcg 299 |||| ||||| |||||||||||||||||| Sbjct: 267 tcctgcgccacttcgccgcgtcgcaggcg 295 Score = 170 bits (86), Expect = 8e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 753 acgacgacgtcgtcgtacgggtcaccggacggagttctctccgtgagcgcggcctcagcc 812 |||||| ||||||||||||||||||||||||| || |||||| |||||||||| || | | Sbjct: 776 acgacgtcgtcgtcgtacgggtcaccggacggcgtgctctccatgagcgcggcgtccgtc 835 Query: 813 gacgccgagtgcttgctggaacggatgccgtcgtttgatcccgagttgatctgggagatg 872 |||| ||| ||| ||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 836 gacggcgactgcccgctcgagcggatgccgtcgttcgatcccgagttgatctgggagatg 895 Query: 873 cttaacttctagctgtatagacggagt-ggaaccatggacacaaaccaac 921 ||||||||||||||| |||| ||||| ||||||||||||| ||||||| Sbjct: 896 cttaacttctagctgcgtagatggagtacgaaccatggacacgaaccaac 945 >gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 95.6 bits (48), Expect = 4e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 362 gaagctgtaccgcggcgtgcggctgcggcagtgggggaaatgggtcgccgaaatccggct 421 ||||||||||||||||||||||| |||||| |||||||||||||| || || |||||||| Sbjct: 24245 gaagctgtaccgcggcgtgcggcagcggcactgggggaaatgggtggcggagatccggct 24304 Query: 422 cccacagaaccgggtgcgcgtgtggctcggcacgtacgac 461 || | ||||||| ||| ||||||| |||||||||||| Sbjct: 24305 gccgcggaaccggacgcggctgtggctgggcacgtacgac 24344