BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem112a01 (1080 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050383.1| Oryza sativa (japonica cultivar-group) Os01g... 90 2e-14 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-14 dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic D... 90 2e-14 dbj|AK105493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 2e-14 >ref|NM_001050383.1| Oryza sativa (japonica cultivar-group) Os01g0675800 (Os01g0675800) mRNA, complete cds Length = 1318 Score = 89.7 bits (45), Expect = 2e-14 Identities = 179/223 (80%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 275 ggcgtggtacttcttcaccccactgcgttccaagagccggcgcgggcagcggaaggcgcg 334 ||||||||||||||||||| | |||| ||||||||| |||||||| ||| |||||| Sbjct: 315 ggcgtggtacttcttcaccaccgtgcggtccaagagcaccggcgggcagaggagggcgcg 374 Query: 335 cacggtgggctccggggaggggtgctggcactcggagcacgccgcgaaggccgtggtcgc 394 | |||||| ||| | ||||||||||||| ||| || ||| |||| ||| |||| Sbjct: 375 ggccgtgggcgacggcg---ggtgctggcactccgaggccggcgccaaggacgtcgtcgg 431 Query: 395 cggcgtcggccgcagccgccagatagggcggcgtcagtccttctcgttcgtgaagaagga 454 ||| || || || ||||| |||||||||||| |||| |||||||||||| || ||||| Sbjct: 432 aggcatccgcagcccccgcccgatagggcggcgccagttcttctcgttcgtcaacaagga 491 Query: 455 ggacggccagcgggtccggtcggggtggctcatggtcgagatc 497 || | || |||||| |||||||||||| |||||||||||||| Sbjct: 492 gggcccccggcgggtgcggtcggggtggatcatggtcgagatc 534 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 89.7 bits (45), Expect = 2e-14 Identities = 179/223 (80%), Gaps = 3/223 (1%) Strand = Plus / Minus Query: 275 ggcgtggtacttcttcaccccactgcgttccaagagccggcgcgggcagcggaaggcgcg 334 ||||||||||||||||||| | |||| ||||||||| |||||||| ||| |||||| Sbjct: 27775209 ggcgtggtacttcttcaccaccgtgcggtccaagagcaccggcgggcagaggagggcgcg 27775150 Query: 335 cacggtgggctccggggaggggtgctggcactcggagcacgccgcgaaggccgtggtcgc 394 | |||||| ||| | ||||||||||||| ||| || ||| |||| ||| |||| Sbjct: 27775149 ggccgtgggcgacggcg---ggtgctggcactccgaggccggcgccaaggacgtcgtcgg 27775093 Query: 395 cggcgtcggccgcagccgccagatagggcggcgtcagtccttctcgttcgtgaagaagga 454 ||| || || || ||||| |||||||||||| |||| |||||||||||| || ||||| Sbjct: 27775092 aggcatccgcagcccccgcccgatagggcggcgccagttcttctcgttcgtcaacaagga 27775033 Query: 455 ggacggccagcgggtccggtcggggtggctcatggtcgagatc 497 || | || |||||| |||||||||||| |||||||||||||| Sbjct: 27775032 gggcccccggcgggtgcggtcggggtggatcatggtcgagatc 27774990 >dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 89.7 bits (45), Expect = 2e-14 Identities = 179/223 (80%), Gaps = 3/223 (1%) Strand = Plus / Minus Query: 275 ggcgtggtacttcttcaccccactgcgttccaagagccggcgcgggcagcggaaggcgcg 334 ||||||||||||||||||| | |||| ||||||||| |||||||| ||| |||||| Sbjct: 67264 ggcgtggtacttcttcaccaccgtgcggtccaagagcaccggcgggcagaggagggcgcg 67205 Query: 335 cacggtgggctccggggaggggtgctggcactcggagcacgccgcgaaggccgtggtcgc 394 | |||||| ||| | ||||||||||||| ||| || ||| |||| ||| |||| Sbjct: 67204 ggccgtgggcgacggcg---ggtgctggcactccgaggccggcgccaaggacgtcgtcgg 67148 Query: 395 cggcgtcggccgcagccgccagatagggcggcgtcagtccttctcgttcgtgaagaagga 454 ||| || || || ||||| |||||||||||| |||| |||||||||||| || ||||| Sbjct: 67147 aggcatccgcagcccccgcccgatagggcggcgccagttcttctcgttcgtcaacaagga 67088 Query: 455 ggacggccagcgggtccggtcggggtggctcatggtcgagatc 497 || | || |||||| |||||||||||| |||||||||||||| Sbjct: 67087 gggcccccggcgggtgcggtcggggtggatcatggtcgagatc 67045 >dbj|AK105493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C03, full insert sequence Length = 1319 Score = 89.7 bits (45), Expect = 2e-14 Identities = 179/223 (80%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 275 ggcgtggtacttcttcaccccactgcgttccaagagccggcgcgggcagcggaaggcgcg 334 ||||||||||||||||||| | |||| ||||||||| |||||||| ||| |||||| Sbjct: 316 ggcgtggtacttcttcaccaccgtgcggtccaagagcaccggcgggcagaggagggcgcg 375 Query: 335 cacggtgggctccggggaggggtgctggcactcggagcacgccgcgaaggccgtggtcgc 394 | |||||| ||| | ||||||||||||| ||| || ||| |||| ||| |||| Sbjct: 376 ggccgtgggcgacggcg---ggtgctggcactccgaggccggcgccaaggacgtcgtcgg 432 Query: 395 cggcgtcggccgcagccgccagatagggcggcgtcagtccttctcgttcgtgaagaagga 454 ||| || || || ||||| |||||||||||| |||| |||||||||||| || ||||| Sbjct: 433 aggcatccgcagcccccgcccgatagggcggcgccagttcttctcgttcgtcaacaagga 492 Query: 455 ggacggccagcgggtccggtcggggtggctcatggtcgagatc 497 || | || |||||| |||||||||||| |||||||||||||| Sbjct: 493 gggcccccggcgggtgcggtcggggtggatcatggtcgagatc 535