BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem111l05 (950 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049452.1| Oryza sativa (japonica cultivar-group) Os01g... 373 e-100 emb|CT834870.1| Oryza sativa (indica cultivar-group) cDNA clone:... 303 7e-79 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 >ref|NM_001049452.1| Oryza sativa (japonica cultivar-group) Os01g0328600 (Os01g0328600) mRNA, complete cds Length = 600 Score = 373 bits (188), Expect = e-100 Identities = 301/338 (89%), Gaps = 3/338 (0%) Strand = Plus / Plus Query: 173 cagcagcagccggtggtggatgaggaagaggagatgggaggggaaggcgagcggcagcat 232 |||||||||| | ||||||||||||| ||||||| |||||||||||| || ||||| Sbjct: 123 cagcagcagcagatggtggatgaggaggaggagaggggaggggaaggtgaaaatcagcag 182 Query: 233 cagcagcggcaaggcaagagcaaggcccatggtgaggcctgccttgttctcccccgtggc 292 ||||||| | ||||||||| | ||||||| ||| ||||| | |||||||| ||||| Sbjct: 183 cagcagcag---ggcaagagccaagcccatgtcgagacctgcgctcttctcccctgtggc 239 Query: 293 catggagtggcaggagtgcagcactgagattgaagttgacgttccatgttcagtggcgta 352 |||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| || Sbjct: 240 catggagtggcaggagtgcagcaccgagattgaagtcgatgttccctgttcagtggctta 299 Query: 353 tcagtgttactcagaacgtgagaccattcctcaatggatgccattcatctcatctgtcaa 412 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 300 tcagtgttactcagaacgtgagaccattcctcaatggatgccatttatctcatctgtcaa 359 Query: 413 gatccttgaagataaaccagatctttcgcgctggactttgaagtatgagatacttggtcg 472 ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct: 360 gatccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtcg 419 Query: 473 agctgtagaattttcttggcttgctcgaaacctgacac 510 || |||||||||||| ||||| ||||||||| |||||| Sbjct: 420 agatgtagaattttcgtggctagctcgaaacatgacac 457 Score = 176 bits (89), Expect = 1e-40 Identities = 131/145 (90%) Strand = Plus / Plus Query: 611 actgacagtggcttatgaagttcctggaattttggcgccggttgcatcagcactgaaacc 670 |||||| ||||||||||||||||||| ||||||||| || ||||| ||||||||||| || Sbjct: 456 actgacggtggcttatgaagttcctgaaattttggcacctgttgcgtcagcactgaagcc 515 Query: 671 atttctggaagggttgcttctgaaaggtttagaacgctttgcgacgtttgcgaaggagcg 730 ||||||||||||| ||||| || ||||||||||||| || ||||||||||||||||| || Sbjct: 516 atttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgtttgcgaaggaacg 575 Query: 731 ctatagcaagatccctcagccttga 755 ||||||||||||||||| |||||| Sbjct: 576 atatagcaagatccctcaaccttga 600 >emb|CT834870.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI025M02, full insert sequence Length = 628 Score = 303 bits (153), Expect = 7e-79 Identities = 243/273 (89%) Strand = Plus / Plus Query: 483 ttttcttggcttgctcgaaacctgacacctactaaaaatcaaaagatccattggcgatct 542 ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ttttcgtggctagctcgaaacatgacacctactaaaaaccaaaagatccattggcgatct 60 Query: 543 ctcgaaggtcttcctaatagaggcgctgtccgattctttcccaaaagttcgtcctcttgt 602 || |||||||||| ||||| || ||||| || |||||||| ||||| || |||||||| Sbjct: 61 cttgaaggtcttcaaaataggggtgctgttcgtttctttcctaaaagctcatcctcttgc 120 Query: 603 agagtacaactgacagtggcttatgaagttcctggaattttggcgccggttgcatcagca 662 |||||||||||||| ||||||||||||||||||| ||||||||| || ||||| |||||| Sbjct: 121 agagtacaactgacggtggcttatgaagttcctgaaattttggcacctgttgcgtcagca 180 Query: 663 ctgaaaccatttctggaagggttgcttctgaaaggtttagaacgctttgcgacgtttgcg 722 ||||| ||||||||||||||| ||||| || ||||||||||||| || |||| ||||||| Sbjct: 181 ctgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgatgtttgcg 240 Query: 723 aaggagcgctatagcaagatccctcagccttga 755 ||||| || ||||||||||||||||| |||||| Sbjct: 241 aaggaacgatatagcaagatccctcaaccttga 273 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 155 bits (78), Expect = 4e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 312 agcactgagattgaagttgacgttccatgttcagtggcgtatcagtgttactcagaacgt 371 ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 12634614 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 12634673 Query: 372 gagaccattcctcaatggatgccattcatctcatctgtcaag 413 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12634674 gagaccattcctcaatggatgccatttatctcatctgtcaag 12634715 Score = 131 bits (66), Expect = 6e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 412 agatccttgaagataaaccagatctttcgcgctggactttgaagtatgagatacttggtc 471 |||||||||||||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 12635988 agatccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtc 12636047 Query: 472 gagctgtagaattttcttggcttgctcgaaacctgaca 509 ||| |||||||||||| ||||| ||||||||| ||||| Sbjct: 12636048 gagatgtagaattttcgtggctagctcgaaacatgaca 12636085 Score = 119 bits (60), Expect = 2e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 660 gcactgaaaccatttctggaagggttgcttctgaaaggtttagaacgctttgcgacgttt 719 |||||||| ||||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 12636819 gcactgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgttt 12636878 Query: 720 gcgaaggagcgctatagcaagatccctcagccttga 755 |||||||| || ||||||||||||||||| |||||| Sbjct: 12636879 gcgaaggaacgatatagcaagatccctcaaccttga 12636914 >dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 155 bits (78), Expect = 4e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 312 agcactgagattgaagttgacgttccatgttcagtggcgtatcagtgttactcagaacgt 371 ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 146224 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 146283 Query: 372 gagaccattcctcaatggatgccattcatctcatctgtcaag 413 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 146284 gagaccattcctcaatggatgccatttatctcatctgtcaag 146325 Score = 131 bits (66), Expect = 6e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 412 agatccttgaagataaaccagatctttcgcgctggactttgaagtatgagatacttggtc 471 |||||||||||||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 147598 agatccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtc 147657 Query: 472 gagctgtagaattttcttggcttgctcgaaacctgaca 509 ||| |||||||||||| ||||| ||||||||| ||||| Sbjct: 147658 gagatgtagaattttcgtggctagctcgaaacatgaca 147695 Score = 119 bits (60), Expect = 2e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 660 gcactgaaaccatttctggaagggttgcttctgaaaggtttagaacgctttgcgacgttt 719 |||||||| ||||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 148429 gcactgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgttt 148488 Query: 720 gcgaaggagcgctatagcaagatccctcagccttga 755 |||||||| || ||||||||||||||||| |||||| Sbjct: 148489 gcgaaggaacgatatagcaagatccctcaaccttga 148524 >dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 155 bits (78), Expect = 4e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 312 agcactgagattgaagttgacgttccatgttcagtggcgtatcagtgttactcagaacgt 371 ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1643 agcaccgagattgaagtcgatgttccctgttcagtggcttatcagtgttactcagaacgt 1702 Query: 372 gagaccattcctcaatggatgccattcatctcatctgtcaag 413 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1703 gagaccattcctcaatggatgccatttatctcatctgtcaag 1744 Score = 131 bits (66), Expect = 6e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 412 agatccttgaagataaaccagatctttcgcgctggactttgaagtatgagatacttggtc 471 |||||||||||||||||||||||| || || |||||||||||||||||||||||||||| Sbjct: 3017 agatccttgaagataaaccagatcaatcacgttggactttgaagtatgagatacttggtc 3076 Query: 472 gagctgtagaattttcttggcttgctcgaaacctgaca 509 ||| |||||||||||| ||||| ||||||||| ||||| Sbjct: 3077 gagatgtagaattttcgtggctagctcgaaacatgaca 3114 Score = 119 bits (60), Expect = 2e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 660 gcactgaaaccatttctggaagggttgcttctgaaaggtttagaacgctttgcgacgttt 719 |||||||| ||||||||||||||| ||||| || ||||||||||||| || ||||||||| Sbjct: 3848 gcactgaagccatttctggaagggctgcttatgcaaggtttagaacgtttcgcgacgttt 3907 Query: 720 gcgaaggagcgctatagcaagatccctcagccttga 755 |||||||| || ||||||||||||||||| |||||| Sbjct: 3908 gcgaaggaacgatatagcaagatccctcaaccttga 3943