BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem110n06
         (1055 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AF315811.1|AF315811 Triticum aestivum RNA-binding protein mRN...   317   5e-83
emb|CT830622.1| Oryza sativa (indica cultivar-group) cDNA clone:...    96   3e-16
ref|NM_001058358.1| Oryza sativa (japonica cultivar-group) Os03g...    96   3e-16
dbj|AK101225.1| Oryza sativa (japonica cultivar-group) cDNA clon...    96   3e-16
dbj|AK067084.1| Oryza sativa (japonica cultivar-group) cDNA clon...    96   3e-16

>gb|AF315811.1|AF315811 Triticum aestivum RNA-binding protein mRNA, complete cds
          Length = 660

 Score =  317 bits (160), Expect = 5e-83
 Identities = 271/308 (87%)
 Strand = Plus / Plus

                                                                       
Query: 159 aatgtcggacgctgacgactaccgttgcttcgttggaagcctttcgtggtccacaacgga 218
           |||||||||||| || || ||||||||||||||||| ||||| || |||  |||||| ||
Sbjct: 49  aatgtcggacgcagatgattaccgttgcttcgttggcagcctgtcatggaacacaactga 108

                                                                       
Query: 219 agtagaactgaaggatgcatttgggaaatttggtcgtctaaccgaggcgaaggtggttct 278
            || || ||||||||||| |||||||||||||||||  | || ||| | |||||||||||
Sbjct: 109 tgtggatctgaaggatgcttttgggaaatttggtcgagttactgagacaaaggtggttct 168

                                                                       
Query: 279 tgacaagttttctgggcgatcacgtggctttggctttgtgacttttgatgacaagaagga 338
           ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 169 tgacaagttctctggccgatcacgtggctttggatttgtgacttttgatgacaagaaggc 228

                                                                       
Query: 339 catggaagaagccattgaggctatgaatggaatggatctggatggaaggaatattactgt 398
           ||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 229 catggaagaagctgttgaggctatgaatggaattgatttggatggaaggaatattactgt 288

                                                                       
Query: 399 cgaaagagctcagcctcaaagctcgggcagggaccgtgatggagaccgagactatagtcg 458
            |||||||| || |||||| | || |||||| ||||||||||||| ||||||||| || |
Sbjct: 289 tgaaagagcacaacctcaaggttcaggcaggaaccgtgatggagatcgagactatcgtgg 348

                   
Query: 459 tggtggtg 466
           ||||||||
Sbjct: 349 tggtggtg 356



 Score =  101 bits (51), Expect = 6e-18
 Identities = 121/144 (84%), Gaps = 9/144 (6%)
 Strand = Plus / Plus

                                                                       
Query: 516 ccgtgattttggtgggggtcgtggtggcggc---ggcggcggcggtgattgcttcaaatg 572
           ||||||||||||||| ||||||||||| ||    || || ||||||||||||| ||||||
Sbjct: 373 ccgtgattttggtggcggtcgtggtggtggtcgtggtggtggcggtgattgctacaaatg 432

                                                                       
Query: 573 tggcaaacctggccatttcgcaaaggaatgcccttctggtgatggtggcagggatgacag 632
           |||||| ||||| ||||| |||| ||| ||||| ||||||||||||||       |||||
Sbjct: 433 tggcaagcctggtcattttgcaagggagtgcccatctggtgatggtgg------ggacag 486

                                   
Query: 633 atatggtagcagggatgacaggta 656
            |||||||||||||||||||||||
Sbjct: 487 gtatggtagcagggatgacaggta 510


>emb|CT830622.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI026C10, full
           insert sequence
          Length = 918

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 aaggtggttcttgacaagttttctgggcgatcacgtggctttggctttgtgacttttgat 327
           ||||||||| ||||||||| |||||| || || ||||| |||||||||||||| ||||||
Sbjct: 254 aaggtggtttttgacaagtattctggccgttctcgtggttttggctttgtgacctttgat 313

                                                                   
Query: 328 gacaagaaggacatggaagaagccattgaggctatgaatggaatggatctggatgg 383
           || ||||| | ||||||||| || ||||| |  ||||||||| ||||| |||||||
Sbjct: 314 gagaagaaagccatggaagatgctattgaaggaatgaatggattggatttggatgg 369


>ref|NM_001058358.1| Oryza sativa (japonica cultivar-group) Os03g0836200 (Os03g0836200)
           mRNA, complete cds
          Length = 1693

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 aaggtggttcttgacaagttttctgggcgatcacgtggctttggctttgtgacttttgat 327
           ||||||||| ||||||||| |||||| || || ||||| |||||||||||||| ||||||
Sbjct: 187 aaggtggtttttgacaagtattctggccgttctcgtggttttggctttgtgacctttgat 246

                                                                   
Query: 328 gacaagaaggacatggaagaagccattgaggctatgaatggaatggatctggatgg 383
           || ||||| | ||||||||| || ||||| |  ||||||||| ||||| |||||||
Sbjct: 247 gagaagaaagccatggaagatgctattgaaggaatgaatggattggatttggatgg 302


>dbj|AK101225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031E20, full
           insert sequence
          Length = 2597

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 aaggtggttcttgacaagttttctgggcgatcacgtggctttggctttgtgacttttgat 327
           ||||||||| ||||||||| |||||| || || ||||| |||||||||||||| ||||||
Sbjct: 866 aaggtggtttttgacaagtattctggccgttctcgtggttttggctttgtgacctttgat 925

                                                                   
Query: 328 gacaagaaggacatggaagaagccattgaggctatgaatggaatggatctggatgg 383
           || ||||| | ||||||||| || ||||| |  ||||||||| ||||| |||||||
Sbjct: 926 gagaagaaagccatggaagatgctattgaaggaatgaatggattggatttggatgg 981


>dbj|AK067084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095N17, full
           insert sequence
          Length = 1694

 Score = 95.6 bits (48), Expect = 3e-16
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 aaggtggttcttgacaagttttctgggcgatcacgtggctttggctttgtgacttttgat 327
           ||||||||| ||||||||| |||||| || || ||||| |||||||||||||| ||||||
Sbjct: 188 aaggtggtttttgacaagtattctggccgttctcgtggttttggctttgtgacctttgat 247

                                                                   
Query: 328 gacaagaaggacatggaagaagccattgaggctatgaatggaatggatctggatgg 383
           || ||||| | ||||||||| || ||||| |  ||||||||| ||||| |||||||
Sbjct: 248 gagaagaaagccatggaagatgctattgaaggaatgaatggattggatttggatgg 303