BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110m02 (1223 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001053899.1| Oryza sativa (japonica cultivar-group) Os02g... 246 2e-61 dbj|AK110833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 2e-61 ref|NM_001059693.1| Oryza sativa (japonica cultivar-group) Os04g... 214 6e-52 dbj|AK068039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 6e-52 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 >ref|NM_001053899.1| Oryza sativa (japonica cultivar-group) Os02g0603600 (Os02g0603600) mRNA, partial cds Length = 1241 Score = 246 bits (124), Expect = 2e-61 Identities = 163/176 (92%) Strand = Plus / Plus Query: 896 ggaacggaggacgaggattagcgagaagctcaggaagctgcaggagctagtgcccaacat 955 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 697 ggaacggaggacgagaattagcgagaagctcaggaagctgcaggagctggtgcccaacat 756 Query: 956 ggacaagcaaacgggcacctcggacatgttggacctcgcagttgagcacatcaagggcct 1015 |||||||||||| |||| |||||||||||||||| |||||||||||||||||||| || Sbjct: 757 ggacaagcaaacaagcacagcggacatgttggaccttgcagttgagcacatcaagggtct 816 Query: 1016 ccagagccagctgcagactctgaagcatgagcaggagaaatgtacctgctgcagca 1071 ||||||||||||||| |||||||||||||||||||||| || || |||||||||| Sbjct: 817 gcagagccagctgcaggctctgaagcatgagcaggagaagtgcacttgctgcagca 872 Score = 226 bits (114), Expect = 2e-55 Identities = 206/237 (86%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 667 ccgccgccggcggcggaggcggcgggggcttctccatcgtcggcccgtgggacgagtcga 726 |||||| |||| || | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 355 ccgccggcggcagcagcggcggcggcgggttctccatcgtcgggccgtgggaggagtcca 414 Query: 727 gggacctcgttgccaccctcggagggtacgagt------ttatcggcatgtcgagctcgt 780 ||||| || | |||||||||| |||||||||| | ||||||| ||||| ||| Sbjct: 415 gggacatcatctccaccctcggcgggtacgagtcccagttcggcggcatggcgagcacgt 474 Query: 781 cggcgctggagatggcgggcatggacaggtacatgcagctgcagcaagaccaggtgccgt 840 |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 475 cggcgctggagatggccggcatggacaggtacctgcagctgcagcatgaccaggtgccgt 534 Query: 841 tcaaagtgagggccaagcgcggctgcgcaacgcaccccaggagcatcgccgagaggg 897 |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 535 tcaaagtgcgggccaagcgcggctgcgcgacgcaccccaggagcatcgcggagaggg 591 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 359 gctggcccggcacagcagctcgccggcgaggttcttctccaacctcatggtgggcaacgg 418 |||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||| Sbjct: 83 gctggcgcggcacagcagctcgccggccggattcttctccaacctcatggccagcaacgg 142 Query: 419 ctttccagggtcaaaag 435 ||||||||| ||||||| Sbjct: 143 ctttccaggctcaaaag 159 >dbj|AK110833.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A09, full insert sequence Length = 1241 Score = 246 bits (124), Expect = 2e-61 Identities = 163/176 (92%) Strand = Plus / Plus Query: 896 ggaacggaggacgaggattagcgagaagctcaggaagctgcaggagctagtgcccaacat 955 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 697 ggaacggaggacgagaattagcgagaagctcaggaagctgcaggagctggtgcccaacat 756 Query: 956 ggacaagcaaacgggcacctcggacatgttggacctcgcagttgagcacatcaagggcct 1015 |||||||||||| |||| |||||||||||||||| |||||||||||||||||||| || Sbjct: 757 ggacaagcaaacaagcacagcggacatgttggaccttgcagttgagcacatcaagggtct 816 Query: 1016 ccagagccagctgcagactctgaagcatgagcaggagaaatgtacctgctgcagca 1071 ||||||||||||||| |||||||||||||||||||||| || || |||||||||| Sbjct: 817 gcagagccagctgcaggctctgaagcatgagcaggagaagtgcacttgctgcagca 872 Score = 226 bits (114), Expect = 2e-55 Identities = 206/237 (86%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 667 ccgccgccggcggcggaggcggcgggggcttctccatcgtcggcccgtgggacgagtcga 726 |||||| |||| || | |||||||| || |||||||||||||| |||||||| ||||| | Sbjct: 355 ccgccggcggcagcagcggcggcggcgggttctccatcgtcgggccgtgggaggagtcca 414 Query: 727 gggacctcgttgccaccctcggagggtacgagt------ttatcggcatgtcgagctcgt 780 ||||| || | |||||||||| |||||||||| | ||||||| ||||| ||| Sbjct: 415 gggacatcatctccaccctcggcgggtacgagtcccagttcggcggcatggcgagcacgt 474 Query: 781 cggcgctggagatggcgggcatggacaggtacatgcagctgcagcaagaccaggtgccgt 840 |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 475 cggcgctggagatggccggcatggacaggtacctgcagctgcagcatgaccaggtgccgt 534 Query: 841 tcaaagtgagggccaagcgcggctgcgcaacgcaccccaggagcatcgccgagaggg 897 |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 535 tcaaagtgcgggccaagcgcggctgcgcgacgcaccccaggagcatcgcggagaggg 591 Score = 89.7 bits (45), Expect = 2e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 359 gctggcccggcacagcagctcgccggcgaggttcttctccaacctcatggtgggcaacgg 418 |||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||| Sbjct: 83 gctggcgcggcacagcagctcgccggccggattcttctccaacctcatggccagcaacgg 142 Query: 419 ctttccagggtcaaaag 435 ||||||||| ||||||| Sbjct: 143 ctttccaggctcaaaag 159 >ref|NM_001059693.1| Oryza sativa (japonica cultivar-group) Os04g0489600 (Os04g0489600) mRNA, complete cds Length = 1756 Score = 214 bits (108), Expect = 6e-52 Identities = 222/260 (85%) Strand = Plus / Plus Query: 814 tgcagctgcagcaagaccaggtgccgttcaaagtgagggccaagcgcggctgcgcaacgc 873 ||||| ||||||| ||||||||||| |||| ||| |||||||||| || ||||| |||| Sbjct: 1006 tgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgc 1065 Query: 874 accccaggagcatcgccgagagggaacggaggacgaggattagcgagaagctcaggaagc 933 |||| |||||||||| |||||||| | || |||||||| |||||||||||||||||| Sbjct: 1066 acccacggagcatcgcagagagggagagaagaacgaggatcagcgagaagctcaggaagt 1125 Query: 934 tgcaggagctagtgcccaacatggacaagcaaacgggcacctcggacatgttggacctcg 993 |||||| || |||||||||||||||||||||||| | || || |||||| ||||| | | Sbjct: 1126 tgcaggccctggtgcccaacatggacaagcaaacgagtacttcagacatgctggacttag 1185 Query: 994 cagttgagcacatcaagggcctccagagccagctgcagactctgaagcatgagcaggaga 1053 ||||||| ||||||||||| || |||||||||||||||||||||||| | || |||||| Sbjct: 1186 cagttgatcacatcaagggactgcagagccagctgcagactctgaaggaagacaaggaga 1245 Query: 1054 aatgtacctgctgcagcaag 1073 |||| |||||| || ||||| Sbjct: 1246 aatgcacctgcagctgcaag 1265 >dbj|AK068039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131B20, full insert sequence Length = 1757 Score = 214 bits (108), Expect = 6e-52 Identities = 222/260 (85%) Strand = Plus / Plus Query: 814 tgcagctgcagcaagaccaggtgccgttcaaagtgagggccaagcgcggctgcgcaacgc 873 ||||| ||||||| ||||||||||| |||| ||| |||||||||| || ||||| |||| Sbjct: 1007 tgcagatgcagcacgaccaggtgccattcagagtacgggccaagcgtggatgcgcgacgc 1066 Query: 874 accccaggagcatcgccgagagggaacggaggacgaggattagcgagaagctcaggaagc 933 |||| |||||||||| |||||||| | || |||||||| |||||||||||||||||| Sbjct: 1067 acccacggagcatcgcagagagggagagaagaacgaggatcagcgagaagctcaggaagt 1126 Query: 934 tgcaggagctagtgcccaacatggacaagcaaacgggcacctcggacatgttggacctcg 993 |||||| || |||||||||||||||||||||||| | || || |||||| ||||| | | Sbjct: 1127 tgcaggccctggtgcccaacatggacaagcaaacgagtacttcagacatgctggacttag 1186 Query: 994 cagttgagcacatcaagggcctccagagccagctgcagactctgaagcatgagcaggaga 1053 ||||||| ||||||||||| || |||||||||||||||||||||||| | || |||||| Sbjct: 1187 cagttgatcacatcaagggactgcagagccagctgcagactctgaaggaagacaaggaga 1246 Query: 1054 aatgtacctgctgcagcaag 1073 |||| |||||| || ||||| Sbjct: 1247 aatgcacctgcagctgcaag 1266 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 202 bits (102), Expect = 2e-48 Identities = 126/134 (94%) Strand = Plus / Plus Query: 764 cggcatgtcgagctcgtcggcgctggagatggcgggcatggacaggtacatgcagctgca 823 ||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 23668795 cggcatggcgagcacgtcggcgctggagatggccggcatggacaggtacctgcagctgca 23668854 Query: 824 gcaagaccaggtgccgttcaaagtgagggccaagcgcggctgcgcaacgcaccccaggag 883 ||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 23668855 gcatgaccaggtgccgttcaaagtgcgggccaagcgcggctgcgcgacgcaccccaggag 23668914 Query: 884 catcgccgagaggg 897 |||||| ||||||| Sbjct: 23668915 catcgcggagaggg 23668928 Score = 117 bits (59), Expect = 1e-22 Identities = 65/67 (97%) Strand = Plus / Plus Query: 896 ggaacggaggacgaggattagcgagaagctcaggaagctgcaggagctagtgcccaacat 955 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23669034 ggaacggaggacgagaattagcgagaagctcaggaagctgcaggagctggtgcccaacat 23669093 Query: 956 ggacaag 962 ||||||| Sbjct: 23669094 ggacaag 23669100 Score = 87.7 bits (44), Expect = 1e-13 Identities = 53/56 (94%) Strand = Plus / Plus Query: 976 cggacatgttggacctcgcagttgagcacatcaagggcctccagagccagctgcag 1031 |||||||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 23669640 cggacatgttggaccttgcagttgagcacatcaagggtctgcagagccagctgcag 23669695