BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110h10 (907 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060428.1| Oryza sativa (japonica cultivar-group) Os04g... 634 e-178 dbj|AK106689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 618 e-174 emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 299 1e-77 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 299 1e-77 emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 299 1e-77 >ref|NM_001060428.1| Oryza sativa (japonica cultivar-group) Os04g0618600 (Os04g0618600) mRNA, complete cds Length = 1796 Score = 634 bits (320), Expect = e-178 Identities = 487/542 (89%), Gaps = 3/542 (0%) Strand = Plus / Plus Query: 207 caagaaggtctactcctatccgcagaagcagatctgctgagttccataatttttcagaaa 266 |||||||| |||| |||| | | ||||||||||||||||||||||| ||||||||||||| Sbjct: 925 caagaaggcctacccctaccaggagaagcagatctgctgagttccacaatttttcagaaa 984 Query: 267 ggaggagaagggataggatcaatgagaagctgaaggcactgaaagagctactcccaaatt 326 ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 985 ggaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctacttccaaatt 1044 Query: 327 gcaccaaaaccgacaaagtgtcgatgctagatgaagccatcgactacctgaaatcacttc 386 ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| | Sbjct: 1045 gcaccaagaccgacaaagtttcgatgctggatgaagcgatcgactacctgaaatcactcc 1104 Query: 387 aagtacaactccagatgctggtcatggggaagggaatggcaccagtggtgcctcctgagt 446 || |||||||||||||||||||||||||||||||||||||||| || || ||||||||| Sbjct: 1105 aactacaactccagatgctggtcatggggaagggaatggcaccggttgttcctcctgagc 1164 Query: 447 tgcaacaatacatgcactatatcactgctgatcctgcccaactgcttcccttgcgcccct 506 ||||||||||||||||||||||||| ||||||||| | ||| | | |||| | ||||||| Sbjct: 1165 tgcaacaatacatgcactatatcacagctgatccttctcaaattcctcccatacgcccct 1224 Query: 507 ccgagccgcggccatttcagataactcacgccaccccgcagcgacagtctaatgtcgagt 566 ||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||| Sbjct: 1225 ccgagccgcggccatttcagataacccacgccacccaacagagacagtctaacgtcgagt 1284 Query: 567 cggacttcttgagccagatgcagaacttgcacccttctgagccacatcagaacttcctca 626 |||| |||||||||||||||||||| ||||||||||| ||||||| ||| || ||||||| Sbjct: 1285 cggatttcttgagccagatgcagaatttgcacccttcagagccacctcaaaatttcctca 1344 Query: 627 ggccaccaaaattacaattgtatacgccgg---agcagaggggagggctagctagcagca 683 | ||||||||||| || ||||| ||||||| ||||||| |||| |||||||| |||| Sbjct: 1345 gaccaccaaaattgcagttgtacacgccggagcagcagagaagaggtctagctagtagca 1404 Query: 684 gtggccacaacggcggttggatcacagagaggaattcctcgtacaactttatggaatgat 743 ||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||| Sbjct: 1405 gtggccacaacagcggttggatcacggagaggaattcatcgtacaacttcttggagtgat 1464 Query: 744 ga 745 || Sbjct: 1465 ga 1466 Score = 79.8 bits (40), Expect = 2e-11 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 gggtcgaagagaccgtctggtcaccaagaaagctctcag-gctctccatgtctaggctag 59 ||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||| || Sbjct: 718 gggtcgaggagaccatcttgtcaccaagaaagctctcagaactctccatctctaggccag 777 Query: 60 cctagggctggaccag 75 | |||||||||||||| Sbjct: 778 cttagggctggaccag 793 >dbj|AK106689.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C05, full insert sequence Length = 1796 Score = 618 bits (312), Expect = e-174 Identities = 485/542 (89%), Gaps = 3/542 (0%) Strand = Plus / Plus Query: 207 caagaaggtctactcctatccgcagaagcagatctgctgagttccataatttttcagaaa 266 |||||||| |||| |||| | | ||||||||||||||||||||||| ||||||||||||| Sbjct: 925 caagaaggcctacccctaccaggagaagcagatctgctgagttccacaatttttcagaaa 984 Query: 267 ggaggagaagggataggatcaatgagaagctgaaggcactgaaagagctactcccaaatt 326 ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 985 ggaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctacttccaaatt 1044 Query: 327 gcaccaaaaccgacaaagtgtcgatgctagatgaagccatcgactacctgaaatcacttc 386 ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| | Sbjct: 1045 gcaccaagaccgacaaagtttcgatgctggatgaagcgatcgactacctgaaatcactcc 1104 Query: 387 aagtacaactccagatgctggtcatggggaagggaatggcaccagtggtgcctcctgagt 446 || |||||||||||||||||||||| ||||||||||||||||| || || ||||||||| Sbjct: 1105 aactacaactccagatgctggtcatagggaagggaatggcaccggttgttcctcctgagc 1164 Query: 447 tgcaacaatacatgcactatatcactgctgatcctgcccaactgcttcccttgcgcccct 506 ||||||||||||||||||||||||| ||||||||| | ||| | | |||| | ||||||| Sbjct: 1165 tgcaacaatacatgcactatatcacagctgatccttctcaaattcctcccatacgcccct 1224 Query: 507 ccgagccgcggccatttcagataactcacgccaccccgcagcgacagtctaatgtcgagt 566 ||||||||||||||||||||||||| |||||||||| ||| |||||||||| ||||||| Sbjct: 1225 ccgagccgcggccatttcagataacccacgccacccaacagagacagtctaacgtcgagt 1284 Query: 567 cggacttcttgagccagatgcagaacttgcacccttctgagccacatcagaacttcctca 626 |||| |||||||||||||||||||| ||||||||||| ||||||| ||| || ||||||| Sbjct: 1285 cggatttcttgagccagatgcagaatttgcacccttcagagccacctcaaaatttcctca 1344 Query: 627 ggccaccaaaattacaattgtatacgccgg---agcagaggggagggctagctagcagca 683 | ||||| ||||| || ||||| ||||||| ||||||| |||| |||||||| |||| Sbjct: 1345 gaccaccgaaattgcagttgtacacgccggagcagcagagaagaggtctagctagtagca 1404 Query: 684 gtggccacaacggcggttggatcacagagaggaattcctcgtacaactttatggaatgat 743 ||||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| |||| Sbjct: 1405 gtggccacaacagcggttggatcacggagaggaattcatcgtacaacttcttggagtgat 1464 Query: 744 ga 745 || Sbjct: 1465 ga 1466 Score = 79.8 bits (40), Expect = 2e-11 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 gggtcgaagagaccgtctggtcaccaagaaagctctcag-gctctccatgtctaggctag 59 ||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||| || Sbjct: 718 gggtcgaggagaccatcttgtcaccaagaaagctctcagaactctccatctctaggccag 777 Query: 60 cctagggctggaccag 75 | |||||||||||||| Sbjct: 778 cttagggctggaccag 793 >emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete sequence Length = 131195 Score = 299 bits (151), Expect = 1e-77 Identities = 232/259 (89%) Strand = Plus / Plus Query: 398 cagatgctggtcatggggaagggaatggcaccagtggtgcctcctgagttgcaacaatac 457 |||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 72803 cagatgctggtcatggggaagggaatggcaccggttgttcctcctgagctgcaacaatac 72862 Query: 458 atgcactatatcactgctgatcctgcccaactgcttcccttgcgcccctccgagccgcgg 517 |||||||||||||| ||||||||| | ||| | | |||| | |||||||||||||||||| Sbjct: 72863 atgcactatatcacagctgatccttctcaaattcctcccatacgcccctccgagccgcgg 72922 Query: 518 ccatttcagataactcacgccaccccgcagcgacagtctaatgtcgagtcggacttcttg 577 |||||||||||||| |||||||||| ||| |||||||||| ||||||||||| |||||| Sbjct: 72923 ccatttcagataacccacgccacccaacagagacagtctaacgtcgagtcggatttcttg 72982 Query: 578 agccagatgcagaacttgcacccttctgagccacatcagaacttcctcaggccaccaaaa 637 |||||||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||| Sbjct: 72983 agccagatgcagaatttgcacccttcagagccacctcaaaatttcctcagaccaccaaaa 73042 Query: 638 ttacaattgtatacgccgg 656 || || ||||| ||||||| Sbjct: 73043 ttgcagttgtacacgccgg 73061 Score = 107 bits (54), Expect = 8e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 268 gaggagaagggataggatcaatgagaagctgaaggcactgaaagagctactcccaaattg 327 |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| Sbjct: 72431 gaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctacttccaaattg 72490 Query: 328 caccaa 333 |||||| Sbjct: 72491 caccaa 72496 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 657 agcagaggggagggctagctagcagcagtggccacaacggcggttggatcacagagagga 716 ||||||| |||| |||||||| ||||||||||||||| ||||||||||||| ||||||| Sbjct: 73440 agcagagaagaggtctagctagtagcagtggccacaacagcggttggatcacggagagga 73499 Query: 717 attcctcgtacaactttatggaatgatga 745 |||| ||||||||||| |||| |||||| Sbjct: 73500 attcatcgtacaacttcttggagtgatga 73528 Score = 91.7 bits (46), Expect = 5e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 335 accgacaaagtgtcgatgctagatgaagccatcgactacctgaaatcacttcaagtacaa 394 ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 72590 accgacaaagtttcgatgctggatgaagcgatcgactacctgaaatcactccaactacaa 72649 Query: 395 ctccag 400 |||||| Sbjct: 72650 ctccag 72655 Score = 79.8 bits (40), Expect = 2e-11 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 gggtcgaagagaccgtctggtcaccaagaaagctctcag-gctctccatgtctaggctag 59 ||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||| || Sbjct: 71938 gggtcgaggagaccatcttgtcaccaagaaagctctcagaactctccatctctaggccag 71997 Query: 60 cctagggctggaccag 75 | |||||||||||||| Sbjct: 71998 cttagggctggaccag 72013 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 299 bits (151), Expect = 1e-77 Identities = 232/259 (89%) Strand = Plus / Plus Query: 398 cagatgctggtcatggggaagggaatggcaccagtggtgcctcctgagttgcaacaatac 457 |||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 31452966 cagatgctggtcatggggaagggaatggcaccggttgttcctcctgagctgcaacaatac 31453025 Query: 458 atgcactatatcactgctgatcctgcccaactgcttcccttgcgcccctccgagccgcgg 517 |||||||||||||| ||||||||| | ||| | | |||| | |||||||||||||||||| Sbjct: 31453026 atgcactatatcacagctgatccttctcaaattcctcccatacgcccctccgagccgcgg 31453085 Query: 518 ccatttcagataactcacgccaccccgcagcgacagtctaatgtcgagtcggacttcttg 577 |||||||||||||| |||||||||| ||| |||||||||| ||||||||||| |||||| Sbjct: 31453086 ccatttcagataacccacgccacccaacagagacagtctaacgtcgagtcggatttcttg 31453145 Query: 578 agccagatgcagaacttgcacccttctgagccacatcagaacttcctcaggccaccaaaa 637 |||||||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||| Sbjct: 31453146 agccagatgcagaatttgcacccttcagagccacctcaaaatttcctcagaccaccaaaa 31453205 Query: 638 ttacaattgtatacgccgg 656 || || ||||| ||||||| Sbjct: 31453206 ttgcagttgtacacgccgg 31453224 Score = 107 bits (54), Expect = 8e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 268 gaggagaagggataggatcaatgagaagctgaaggcactgaaagagctactcccaaattg 327 |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| Sbjct: 31452596 gaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctacttccaaattg 31452655 Query: 328 caccaa 333 |||||| Sbjct: 31452656 caccaa 31452661 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 657 agcagaggggagggctagctagcagcagtggccacaacggcggttggatcacagagagga 716 ||||||| |||| |||||||| ||||||||||||||| ||||||||||||| ||||||| Sbjct: 31453602 agcagagaagaggtctagctagtagcagtggccacaacagcggttggatcacggagagga 31453661 Query: 717 attcctcgtacaactttatggaatgatga 745 |||| ||||||||||| |||| |||||| Sbjct: 31453662 attcatcgtacaacttcttggagtgatga 31453690 Score = 91.7 bits (46), Expect = 5e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 335 accgacaaagtgtcgatgctagatgaagccatcgactacctgaaatcacttcaagtacaa 394 ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 31452753 accgacaaagtttcgatgctggatgaagcgatcgactacctgaaatcactccaactacaa 31452812 Query: 395 ctccag 400 |||||| Sbjct: 31452813 ctccag 31452818 Score = 79.8 bits (40), Expect = 2e-11 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 gggtcgaagagaccgtctggtcaccaagaaagctctcag-gctctccatgtctaggctag 59 ||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||| || Sbjct: 31452103 gggtcgaggagaccatcttgtcaccaagaaagctctcagaactctccatctctaggccag 31452162 Query: 60 cctagggctggaccag 75 | |||||||||||||| Sbjct: 31452163 cttagggctggaccag 31452178 >emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 299 bits (151), Expect = 1e-77 Identities = 232/259 (89%) Strand = Plus / Plus Query: 398 cagatgctggtcatggggaagggaatggcaccagtggtgcctcctgagttgcaacaatac 457 |||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 30649 cagatgctggtcatggggaagggaatggcaccggttgttcctcctgagctgcaacaatac 30708 Query: 458 atgcactatatcactgctgatcctgcccaactgcttcccttgcgcccctccgagccgcgg 517 |||||||||||||| ||||||||| | ||| | | |||| | |||||||||||||||||| Sbjct: 30709 atgcactatatcacagctgatccttctcaaattcctcccatacgcccctccgagccgcgg 30768 Query: 518 ccatttcagataactcacgccaccccgcagcgacagtctaatgtcgagtcggacttcttg 577 |||||||||||||| |||||||||| ||| |||||||||| ||||||||||| |||||| Sbjct: 30769 ccatttcagataacccacgccacccaacagagacagtctaacgtcgagtcggatttcttg 30828 Query: 578 agccagatgcagaacttgcacccttctgagccacatcagaacttcctcaggccaccaaaa 637 |||||||||||||| ||||||||||| ||||||| ||| || |||||||| ||||||||| Sbjct: 30829 agccagatgcagaatttgcacccttcagagccacctcaaaatttcctcagaccaccaaaa 30888 Query: 638 ttacaattgtatacgccgg 656 || || ||||| ||||||| Sbjct: 30889 ttgcagttgtacacgccgg 30907 Score = 107 bits (54), Expect = 8e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 268 gaggagaagggataggatcaatgagaagctgaaggcactgaaagagctactcccaaattg 327 |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| Sbjct: 30279 gaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctacttccaaattg 30338 Query: 328 caccaa 333 |||||| Sbjct: 30339 caccaa 30344 Score = 97.6 bits (49), Expect = 8e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 657 agcagaggggagggctagctagcagcagtggccacaacggcggttggatcacagagagga 716 ||||||| |||| |||||||| ||||||||||||||| ||||||||||||| ||||||| Sbjct: 31285 agcagagaagaggtctagctagtagcagtggccacaacagcggttggatcacggagagga 31344 Query: 717 attcctcgtacaactttatggaatgatga 745 |||| ||||||||||| |||| |||||| Sbjct: 31345 attcatcgtacaacttcttggagtgatga 31373 Score = 91.7 bits (46), Expect = 5e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 335 accgacaaagtgtcgatgctagatgaagccatcgactacctgaaatcacttcaagtacaa 394 ||||||||||| |||||||| |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 30436 accgacaaagtttcgatgctggatgaagcgatcgactacctgaaatcactccaactacaa 30495 Query: 395 ctccag 400 |||||| Sbjct: 30496 ctccag 30501 Score = 79.8 bits (40), Expect = 2e-11 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 1 gggtcgaagagaccgtctggtcaccaagaaagctctcag-gctctccatgtctaggctag 59 ||||||| |||||| ||| |||||||||||||||||||| |||||||| ||||||| || Sbjct: 29786 gggtcgaggagaccatcttgtcaccaagaaagctctcagaactctccatctctaggccag 29845 Query: 60 cctagggctggaccag 75 | |||||||||||||| Sbjct: 29846 cttagggctggaccag 29861