BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110g13 (1176 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001070415.1| Oryza sativa (japonica cultivar-group) Os09g... 775 0.0 dbj|AK109549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 767 0.0 gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 208 4e-50 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 208 4e-50 dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic D... 208 4e-50 >ref|NM_001070415.1| Oryza sativa (japonica cultivar-group) Os09g0553300 (Os09g0553300) mRNA, complete cds Length = 1236 Score = 775 bits (391), Expect = 0.0 Identities = 541/591 (91%) Strand = Plus / Plus Query: 141 ctccaacgccagctcccccgccccgtcgccgccgccccccgtggtgcccaagtcaaagat 200 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 244 ctccaacgccagctcccccgccccctcgccgcctccccccgtggtgcccaagtcaaagat 303 Query: 201 ccgcttttgcccagcatgtggaagtccgacgaaattggcggtaccagatggggatgagaa 260 |||||||||||| | |||||||| ||||||||| |||| | |||||||| ||||| || Sbjct: 304 acgcttttgcccatcttgtggaagcccgacgaaactggctattccagatggagatgaaaa 363 Query: 261 gatgagggctgtttgttcgtcttgtggaagagttcactatgaaaaccccaaaatggttgt 320 |||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 364 gatgagggctgtctgctcttcttgtggaagagttcactatgagaaccccaaaatggttgt 423 Query: 321 tggttgccttgtggagcacgacaacaaggtcctgctttgcagaagaaaaattgaaccagc 380 ||| || |||||||| || || ||||| || || |||||||||||||| || |||||||| Sbjct: 424 tggctgtcttgtggaacatgataacaaagtactcctttgcagaagaaagatcgaaccagc 483 Query: 381 ttatggcctttggactcttcctgctggctatttggaggttggagagtctgcagcagaagg 440 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 484 ttatggcctttggactcttcctgctggttatttggaggttggagagtctgcagcggaagg 543 Query: 441 agcctcgagggaaacattggaagaagcttgtgccgatgtagagatactctcaccttttgc 500 |||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 544 agcctcccgggaaacattggaggaagcttgtgcagatgtagagatactttcaccttttgc 603 Query: 501 tcagttggatattccgctgattggccaatagagttacattattttccgagcaagattgaa 560 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 tcagttggatattccactgattggccaatagagttacattattttccgagcaagattgaa 663 Query: 561 gacccccaacttctcgcctggacctgagtcgctagaatgtgcactttttgctctggatga 620 ||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 664 gacccccaacttctcacctggacctgaatcgctagaatgtgcactttttgccttggatga 723 Query: 621 tatacctttcgattcgctagcattttcttcaatcgtcgtcaccttgaggatgtatattga 680 ||||| || ||||| |||||||||||||| ||| | |||||||||||||||||| |||| Sbjct: 724 cataccatttgattctctagcattttcttcgatcattgtcaccttgaggatgtatcttga 783 Query: 681 agatgtcaagtctggaaacatcaaattccattattgcactataaacaaaag 731 |||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct: 784 agatgtcaagtccggaaatatcaaattccactactgcactataaacaaaag 834 >dbj|AK109549.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G08, full insert sequence Length = 1237 Score = 767 bits (387), Expect = 0.0 Identities = 540/591 (91%) Strand = Plus / Plus Query: 141 ctccaacgccagctcccccgccccgtcgccgccgccccccgtggtgcccaagtcaaagat 200 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 245 ctccaacgccagctcccccgccccctcgccgcctccccccgtggtgcccaagtcaaagat 304 Query: 201 ccgcttttgcccagcatgtggaagtccgacgaaattggcggtaccagatggggatgagaa 260 |||||||||||| | |||||||| ||||||||| |||| | |||||||| ||||| || Sbjct: 305 acgcttttgcccatcttgtggaagcccgacgaaactggctattccagatggagatgaaaa 364 Query: 261 gatgagggctgtttgttcgtcttgtggaagagttcactatgaaaaccccaaaatggttgt 320 |||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 365 gatgagggctgtctgctcttcttgtggaagagttcactatgagaaccccaaaatggttgt 424 Query: 321 tggttgccttgtggagcacgacaacaaggtcctgctttgcagaagaaaaattgaaccagc 380 ||| || |||||||| || || ||||| || || |||||||||||||| || |||||||| Sbjct: 425 tggctgtcttgtggaacatgataacaaagtactcctttgcagaagaaagatcgaaccagc 484 Query: 381 ttatggcctttggactcttcctgctggctatttggaggttggagagtctgcagcagaagg 440 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 485 ttatggcctttggactcttcctgctggttatttggaggttggagagtctgcagcggaagg 544 Query: 441 agcctcgagggaaacattggaagaagcttgtgccgatgtagagatactctcaccttttgc 500 |||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 545 agcctcccgggaaacattggaggaagcttgtgcagatgtagagatactttcaccttttgc 604 Query: 501 tcagttggatattccgctgattggccaatagagttacattattttccgagcaagattgaa 560 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcagttggatattccactgattggccaatagagttacattattttccgagcaagattgaa 664 Query: 561 gacccccaacttctcgcctggacctgagtcgctagaatgtgcactttttgctctggatga 620 ||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 665 gacccccaacttctcacctggacctgaatcgctagaatgtgcactttttgccttggatga 724 Query: 621 tatacctttcgattcgctagcattttcttcaatcgtcgtcaccttgaggatgtatattga 680 ||||| || ||||| |||||||||||||| ||| | |||||||||||| ||||| |||| Sbjct: 725 cataccatttgattctctagcattttcttcgatcattgtcaccttgagggtgtatcttga 784 Query: 681 agatgtcaagtctggaaacatcaaattccattattgcactataaacaaaag 731 |||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct: 785 agatgtcaagtccggaaatatcaaattccactactgcactataaacaaaag 835 >gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 208 bits (105), Expect = 4e-50 Identities = 129/137 (94%) Strand = Plus / Minus Query: 392 ggactcttcctgctggctatttggaggttggagagtctgcagcagaaggagcctcgaggg 451 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 79431 ggactcttcctgctggttatttggaggttggagagtctgcagcggaaggagcctcccggg 79372 Query: 452 aaacattggaagaagcttgtgccgatgtagagatactctcaccttttgctcagttggata 511 |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 79371 aaacattggaggaagcttgtgcagatgtagagatactttcaccttttgctcagttggata 79312 Query: 512 ttccgctgattggccaa 528 |||| |||||||||||| Sbjct: 79311 ttccactgattggccaa 79295 Score = 198 bits (100), Expect = 4e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 529 tagagttacattattttccgagcaagattgaagacccccaacttctcgcctggacctgag 588 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79211 tagagttacattattttccgagcaagattgaagacccccaacttctcacctggacctgaa 79152 Query: 589 tcgctagaatgtgcactttttgctctggatgatatacctttcgattcgctagcattttct 648 ||||||||||||||||||||||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 79151 tcgctagaatgtgcactttttgccttggatgacataccatttgattctctagcattttct 79092 Query: 649 tcaatcgtcgtcaccttgaggatg 672 || ||| | ||||||||||||||| Sbjct: 79091 tcgatcattgtcaccttgaggatg 79068 Score = 157 bits (79), Expect = 1e-34 Identities = 121/135 (89%) Strand = Plus / Minus Query: 183 ggtgcccaagtcaaagatccgcttttgcccagcatgtggaagtccgacgaaattggcggt 242 |||||||||||||||||| |||||||||||| | |||||||| ||||||||| |||| | Sbjct: 80352 ggtgcccaagtcaaagatacgcttttgcccatcttgtggaagcccgacgaaactggctat 80293 Query: 243 accagatggggatgagaagatgagggctgtttgttcgtcttgtggaagagttcactatga 302 |||||||| ||||| |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 80292 tccagatggagatgaaaagatgagggctgtctgctcttcttgtggaagagttcactatga 80233 Query: 303 aaaccccaaaatggt 317 |||||||||||||| Sbjct: 80232 gaaccccaaaatggt 80218 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 672 gtatattgaagatgtcaagtctggaaacatcaaattccattattgcactataaacaaaag 731 |||| |||||||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct: 78960 gtatcttgaagatgtcaagtccggaaatatcaaattccactactgcactataaacaaaag 78901 Score = 77.8 bits (39), Expect = 9e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 315 ggttgttggttgccttgtggagcacgacaacaaggtcctgctttgcagaagaaaaattga 374 ||||||||| || |||||||| || || ||||| || || |||||||||||||| || || Sbjct: 79969 ggttgttggctgtcttgtggaacatgataacaaagtactcctttgcagaagaaagatcga 79910 Query: 375 accagcttatggcctttgg 393 ||||||||||||||||||| Sbjct: 79909 accagcttatggcctttgg 79891 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 208 bits (105), Expect = 4e-50 Identities = 129/137 (94%) Strand = Plus / Minus Query: 392 ggactcttcctgctggctatttggaggttggagagtctgcagcagaaggagcctcgaggg 451 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 21622805 ggactcttcctgctggttatttggaggttggagagtctgcagcggaaggagcctcccggg 21622746 Query: 452 aaacattggaagaagcttgtgccgatgtagagatactctcaccttttgctcagttggata 511 |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 21622745 aaacattggaggaagcttgtgcagatgtagagatactttcaccttttgctcagttggata 21622686 Query: 512 ttccgctgattggccaa 528 |||| |||||||||||| Sbjct: 21622685 ttccactgattggccaa 21622669 Score = 198 bits (100), Expect = 4e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 529 tagagttacattattttccgagcaagattgaagacccccaacttctcgcctggacctgag 588 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 21622585 tagagttacattattttccgagcaagattgaagacccccaacttctcacctggacctgaa 21622526 Query: 589 tcgctagaatgtgcactttttgctctggatgatatacctttcgattcgctagcattttct 648 ||||||||||||||||||||||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 21622525 tcgctagaatgtgcactttttgccttggatgacataccatttgattctctagcattttct 21622466 Query: 649 tcaatcgtcgtcaccttgaggatg 672 || ||| | ||||||||||||||| Sbjct: 21622465 tcgatcattgtcaccttgaggatg 21622442 Score = 157 bits (79), Expect = 1e-34 Identities = 121/135 (89%) Strand = Plus / Minus Query: 183 ggtgcccaagtcaaagatccgcttttgcccagcatgtggaagtccgacgaaattggcggt 242 |||||||||||||||||| |||||||||||| | |||||||| ||||||||| |||| | Sbjct: 21623726 ggtgcccaagtcaaagatacgcttttgcccatcttgtggaagcccgacgaaactggctat 21623667 Query: 243 accagatggggatgagaagatgagggctgtttgttcgtcttgtggaagagttcactatga 302 |||||||| ||||| |||||||||||||| || || ||||||||||||||||||||||| Sbjct: 21623666 tccagatggagatgaaaagatgagggctgtctgctcttcttgtggaagagttcactatga 21623607 Query: 303 aaaccccaaaatggt 317 |||||||||||||| Sbjct: 21623606 gaaccccaaaatggt 21623592 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 672 gtatattgaagatgtcaagtctggaaacatcaaattccattattgcactataaacaaaag 731 |||| |||||||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct: 21622334 gtatcttgaagatgtcaagtccggaaatatcaaattccactactgcactataaacaaaag 21622275 Score = 77.8 bits (39), Expect = 9e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 315 ggttgttggttgccttgtggagcacgacaacaaggtcctgctttgcagaagaaaaattga 374 ||||||||| || |||||||| || || ||||| || || |||||||||||||| || || Sbjct: 21623343 ggttgttggctgtcttgtggaacatgataacaaagtactcctttgcagaagaaagatcga 21623284 Query: 375 accagcttatggcctttgg 393 ||||||||||||||||||| Sbjct: 21623283 accagcttatggcctttgg 21623265 >dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 208 bits (105), Expect = 4e-50 Identities = 129/137 (94%) Strand = Plus / Minus Query: 392 ggactcttcctgctggctatttggaggttggagagtctgcagcagaaggagcctcgaggg 451 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 31129 ggactcttcctgctggttatttggaggttggagagtctgcagcggaaggagcctcccggg 31070 Query: 452 aaacattggaagaagcttgtgccgatgtagagatactctcaccttttgctcagttggata 511 |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 31069 aaacattggaggaagcttgtgcagatgtagagatactttcaccttttgctcagttggata 31010 Query: 512 ttccgctgattggccaa 528 |||| |||||||||||| Sbjct: 31009 ttccactgattggccaa 30993 Score = 198 bits (100), Expect = 4e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 529 tagagttacattattttccgagcaagattgaagacccccaacttctcgcctggacctgag 588 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 30909 tagagttacattattttccgagcaagattgaagacccccaacttctcacctggacctgaa 30850 Query: 589 tcgctagaatgtgcactttttgctctggatgatatacctttcgattcgctagcattttct 648 ||||||||||||||||||||||| ||||||| ||||| || ||||| |||||||||||| Sbjct: 30849 tcgctagaatgtgcactttttgccttggatgacataccatttgattctctagcattttct 30790 Query: 649 tcaatcgtcgtcaccttgaggatg 672 || ||| | ||||||||||||||| Sbjct: 30789 tcgatcattgtcaccttgaggatg 30766 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 672 gtatattgaagatgtcaagtctggaaacatcaaattccattattgcactataaacaaaag 731 |||| |||||||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct: 30658 gtatcttgaagatgtcaagtccggaaatatcaaattccactactgcactataaacaaaag 30599