BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110g05 (1288 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056273.1| Oryza sativa (japonica cultivar-group) Os03g... 779 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 779 0.0 gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 779 0.0 dbj|AK110597.1| Oryza sativa (japonica cultivar-group) cDNA clon... 779 0.0 >ref|NM_001056273.1| Oryza sativa (japonica cultivar-group) Os03g0280700 (Os03g0280700) mRNA, complete cds Length = 3714 Score = 779 bits (393), Expect = 0.0 Identities = 600/669 (89%), Gaps = 15/669 (2%) Strand = Plus / Plus Query: 470 gctgacattcttcatgcacgacatcctcggcggctggcagccgtccgcgcgcatcgtgac 529 |||||| |||||||||||||||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 3033 gctgacgttcttcatgcacgacatcctgggcgggtcgcagccgtcggcgcgcatcgtgac 3092 Query: 530 cggcgtggtggcgagcgcggctgccaacgggcagctcccgttcgcgcggccgaacgagaa 589 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 3093 gggcgtggtggcgagcgcggcggcgaacgggcagctcccgttcgcgcggccgaacgacaa 3152 Query: 590 catcttccccatccagggcgcggtgccgctgccgcagggcgcgagcaacctcatcaacag 649 ||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| | Sbjct: 3153 catcttcccgatccagggcgcgatgccgctgccgcagggcgccagcaacctcgtcaacgg 3212 Query: 650 caacaacgtcccctacgtcgccggcctcgggggcacgtccaccacc---atcgtccagaa 706 |||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct: 3213 caacaacgtcccctacgtcgccggcctcggcggcacgtcctccgccgccatcgtccaggg 3272 Query: 707 caacggcgaccccatcaacggcggcaacaagaacatccccttcgtcaacgccggcgacct 766 ||||||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3273 caacggcaacggca---acggtggcaacaagaacatccccttcgtcaacgccggcgacct 3329 Query: 767 gccgtcgggcgtcacgctccagaacctcctcttcggcacgaccaccgtcatcgacgacga 826 |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3330 gccgtccggcgccacgctccagaacctcctcttcggcaccaccaccgtcatcgacgacga 3389 Query: 827 gctcaccgaggggcacgagctcggcgccgcggtcatcggcagaacgcaggggttctacgt 886 |||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 3390 gctcaccgagggccacgagctcggcgccgccgtcgtcggcagggcgcaggggttctacgt 3449 Query: 887 cgcgagctcgcaggatggcaccagcaagacgatcttgctgacggccatgttcgaggg--- 943 ||| ||||||||||| ||||||||||||||| || |||| |||||||||||||| || Sbjct: 3450 cgccagctcgcaggacggcaccagcaagacgctcgtgctcacggccatgttcgacggcgg 3509 Query: 944 ------cgaggggcacggtgacacgctcagcttcttcggagtccaccggatggccgcgtc 997 ||||| |||||| |||||||||||||||||||| |||||||||||||| ||| | Sbjct: 3510 cggcgtcgaggcgcacggcgacacgctcagcttcttcggcgtccaccggatggcggcgcc 3569 Query: 998 ggagtcgcacatcgccatcatcggcggcaccgggaagtacgagaaagccaagggcttcgc 1057 |||||| ||| |||| ||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 3570 ggagtcccacgtcgctgtcatcggcggcacgggcaagtacgagaacgccaaggggttcgc 3629 Query: 1058 cgccatccagacgctacacccgggcgacgagcacaccaccgacggcgtcgagaccctcct 1117 || |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 3630 cgtcatccagacgctgcaccccggcgacgagcacaccaccgacggcgtcgagactctcct 3689 Query: 1118 ccagttcag 1126 ||||||||| Sbjct: 3690 ccagttcag 3698 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 779 bits (393), Expect = 0.0 Identities = 600/669 (89%), Gaps = 15/669 (2%) Strand = Plus / Plus Query: 470 gctgacattcttcatgcacgacatcctcggcggctggcagccgtccgcgcgcatcgtgac 529 |||||| |||||||||||||||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 9569853 gctgacgttcttcatgcacgacatcctgggcgggtcgcagccgtcggcgcgcatcgtgac 9569912 Query: 530 cggcgtggtggcgagcgcggctgccaacgggcagctcccgttcgcgcggccgaacgagaa 589 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 9569913 gggcgtggtggcgagcgcggcggcgaacgggcagctcccgttcgcgcggccgaacgacaa 9569972 Query: 590 catcttccccatccagggcgcggtgccgctgccgcagggcgcgagcaacctcatcaacag 649 ||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| | Sbjct: 9569973 catcttcccgatccagggcgcgatgccgctgccgcagggcgccagcaacctcgtcaacgg 9570032 Query: 650 caacaacgtcccctacgtcgccggcctcgggggcacgtccaccacc---atcgtccagaa 706 |||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct: 9570033 caacaacgtcccctacgtcgccggcctcggcggcacgtcctccgccgccatcgtccaggg 9570092 Query: 707 caacggcgaccccatcaacggcggcaacaagaacatccccttcgtcaacgccggcgacct 766 ||||||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9570093 caacggcaacggca---acggtggcaacaagaacatccccttcgtcaacgccggcgacct 9570149 Query: 767 gccgtcgggcgtcacgctccagaacctcctcttcggcacgaccaccgtcatcgacgacga 826 |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9570150 gccgtccggcgccacgctccagaacctcctcttcggcaccaccaccgtcatcgacgacga 9570209 Query: 827 gctcaccgaggggcacgagctcggcgccgcggtcatcggcagaacgcaggggttctacgt 886 |||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 9570210 gctcaccgagggccacgagctcggcgccgccgtcgtcggcagggcgcaggggttctacgt 9570269 Query: 887 cgcgagctcgcaggatggcaccagcaagacgatcttgctgacggccatgttcgaggg--- 943 ||| ||||||||||| ||||||||||||||| || |||| |||||||||||||| || Sbjct: 9570270 cgccagctcgcaggacggcaccagcaagacgctcgtgctcacggccatgttcgacggcgg 9570329 Query: 944 ------cgaggggcacggtgacacgctcagcttcttcggagtccaccggatggccgcgtc 997 ||||| |||||| |||||||||||||||||||| |||||||||||||| ||| | Sbjct: 9570330 cggcgtcgaggcgcacggcgacacgctcagcttcttcggcgtccaccggatggcggcgcc 9570389 Query: 998 ggagtcgcacatcgccatcatcggcggcaccgggaagtacgagaaagccaagggcttcgc 1057 |||||| ||| |||| ||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 9570390 ggagtcccacgtcgctgtcatcggcggcacgggcaagtacgagaacgccaaggggttcgc 9570449 Query: 1058 cgccatccagacgctacacccgggcgacgagcacaccaccgacggcgtcgagaccctcct 1117 || |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 9570450 cgtcatccagacgctgcaccccggcgacgagcacaccaccgacggcgtcgagactctcct 9570509 Query: 1118 ccagttcag 1126 ||||||||| Sbjct: 9570510 ccagttcag 9570518 >gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 779 bits (393), Expect = 0.0 Identities = 600/669 (89%), Gaps = 15/669 (2%) Strand = Plus / Minus Query: 470 gctgacattcttcatgcacgacatcctcggcggctggcagccgtccgcgcgcatcgtgac 529 |||||| |||||||||||||||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 40954 gctgacgttcttcatgcacgacatcctgggcgggtcgcagccgtcggcgcgcatcgtgac 40895 Query: 530 cggcgtggtggcgagcgcggctgccaacgggcagctcccgttcgcgcggccgaacgagaa 589 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 40894 gggcgtggtggcgagcgcggcggcgaacgggcagctcccgttcgcgcggccgaacgacaa 40835 Query: 590 catcttccccatccagggcgcggtgccgctgccgcagggcgcgagcaacctcatcaacag 649 ||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| | Sbjct: 40834 catcttcccgatccagggcgcgatgccgctgccgcagggcgccagcaacctcgtcaacgg 40775 Query: 650 caacaacgtcccctacgtcgccggcctcgggggcacgtccaccacc---atcgtccagaa 706 |||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct: 40774 caacaacgtcccctacgtcgccggcctcggcggcacgtcctccgccgccatcgtccaggg 40715 Query: 707 caacggcgaccccatcaacggcggcaacaagaacatccccttcgtcaacgccggcgacct 766 ||||||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 40714 caacggcaacggca---acggtggcaacaagaacatccccttcgtcaacgccggcgacct 40658 Query: 767 gccgtcgggcgtcacgctccagaacctcctcttcggcacgaccaccgtcatcgacgacga 826 |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 40657 gccgtccggcgccacgctccagaacctcctcttcggcaccaccaccgtcatcgacgacga 40598 Query: 827 gctcaccgaggggcacgagctcggcgccgcggtcatcggcagaacgcaggggttctacgt 886 |||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 40597 gctcaccgagggccacgagctcggcgccgccgtcgtcggcagggcgcaggggttctacgt 40538 Query: 887 cgcgagctcgcaggatggcaccagcaagacgatcttgctgacggccatgttcgaggg--- 943 ||| ||||||||||| ||||||||||||||| || |||| |||||||||||||| || Sbjct: 40537 cgccagctcgcaggacggcaccagcaagacgctcgtgctcacggccatgttcgacggcgg 40478 Query: 944 ------cgaggggcacggtgacacgctcagcttcttcggagtccaccggatggccgcgtc 997 ||||| |||||| |||||||||||||||||||| |||||||||||||| ||| | Sbjct: 40477 cggcgtcgaggcgcacggcgacacgctcagcttcttcggcgtccaccggatggcggcgcc 40418 Query: 998 ggagtcgcacatcgccatcatcggcggcaccgggaagtacgagaaagccaagggcttcgc 1057 |||||| ||| |||| ||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 40417 ggagtcccacgtcgctgtcatcggcggcacgggcaagtacgagaacgccaaggggttcgc 40358 Query: 1058 cgccatccagacgctacacccgggcgacgagcacaccaccgacggcgtcgagaccctcct 1117 || |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 40357 cgtcatccagacgctgcaccccggcgacgagcacaccaccgacggcgtcgagactctcct 40298 Query: 1118 ccagttcag 1126 ||||||||| Sbjct: 40297 ccagttcag 40289 >dbj|AK110597.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G01, full insert sequence Length = 1311 Score = 779 bits (393), Expect = 0.0 Identities = 600/669 (89%), Gaps = 15/669 (2%) Strand = Plus / Plus Query: 470 gctgacattcttcatgcacgacatcctcggcggctggcagccgtccgcgcgcatcgtgac 529 |||||| |||||||||||||||||||| ||||| | ||||||||| |||||||||||||| Sbjct: 383 gctgacgttcttcatgcacgacatcctgggcgggtcgcagccgtcggcgcgcatcgtgac 442 Query: 530 cggcgtggtggcgagcgcggctgccaacgggcagctcccgttcgcgcggccgaacgagaa 589 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 443 gggcgtggtggcgagcgcggcggcgaacgggcagctcccgttcgcgcggccgaacgacaa 502 Query: 590 catcttccccatccagggcgcggtgccgctgccgcagggcgcgagcaacctcatcaacag 649 ||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| | Sbjct: 503 catcttcccgatccagggcgcgatgccgctgccgcagggcgccagcaacctcgtcaacgg 562 Query: 650 caacaacgtcccctacgtcgccggcctcgggggcacgtccaccacc---atcgtccagaa 706 |||||||||||||||||||||||||||||| ||||||||| || || ||||||||| Sbjct: 563 caacaacgtcccctacgtcgccggcctcggcggcacgtcctccgccgccatcgtccaggg 622 Query: 707 caacggcgaccccatcaacggcggcaacaagaacatccccttcgtcaacgccggcgacct 766 ||||||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 623 caacggcaacggca---acggtggcaacaagaacatccccttcgtcaacgccggcgacct 679 Query: 767 gccgtcgggcgtcacgctccagaacctcctcttcggcacgaccaccgtcatcgacgacga 826 |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 680 gccgtccggcgccacgctccagaacctcctcttcggcaccaccaccgtcatcgacgacga 739 Query: 827 gctcaccgaggggcacgagctcggcgccgcggtcatcggcagaacgcaggggttctacgt 886 |||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 740 gctcaccgagggccacgagctcggcgccgccgtcgtcggcagggcgcaggggttctacgt 799 Query: 887 cgcgagctcgcaggatggcaccagcaagacgatcttgctgacggccatgttcgaggg--- 943 ||| ||||||||||| ||||||||||||||| || |||| |||||||||||||| || Sbjct: 800 cgccagctcgcaggacggcaccagcaagacgctcgtgctcacggccatgttcgacggcgg 859 Query: 944 ------cgaggggcacggtgacacgctcagcttcttcggagtccaccggatggccgcgtc 997 ||||| |||||| |||||||||||||||||||| |||||||||||||| ||| | Sbjct: 860 cggcgtcgaggcgcacggcgacacgctcagcttcttcggcgtccaccggatggcggcgcc 919 Query: 998 ggagtcgcacatcgccatcatcggcggcaccgggaagtacgagaaagccaagggcttcgc 1057 |||||| ||| |||| ||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 920 ggagtcccacgtcgctgtcatcggcggcacgggcaagtacgagaacgccaaggggttcgc 979 Query: 1058 cgccatccagacgctacacccgggcgacgagcacaccaccgacggcgtcgagaccctcct 1117 || |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 980 cgtcatccagacgctgcaccccggcgacgagcacaccaccgacggcgtcgagactctcct 1039 Query: 1118 ccagttcag 1126 ||||||||| Sbjct: 1040 ccagttcag 1048