BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110d22 (951 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055356.1| Oryza sativa (japonica cultivar-group) Os03g... 301 3e-78 dbj|AK060370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 7e-76 emb|CT833438.1| Oryza sativa (indica cultivar-group) cDNA clone:... 285 2e-73 gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 234 5e-58 gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome... 234 5e-58 >ref|NM_001055356.1| Oryza sativa (japonica cultivar-group) Os03g0125900 (Os03g0125900) mRNA, complete cds Length = 1016 Score = 301 bits (152), Expect = 3e-78 Identities = 258/295 (87%), Gaps = 15/295 (5%) Strand = Plus / Plus Query: 364 cggcggcggcggggaggccggagaggagggggtccgcgaggcggtgggacagcggg---- 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 513 cggcggcggcggggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcg 572 Query: 420 --agcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccccgctccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 573 gcagcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccacgctcct 632 Query: 478 tcacccgcagcttcaccgcgccgc---------gcccctgccgcccgccgtcggtatccg 528 |||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct: 633 tcacccgcagcttcaccgcgccgcgcaccactggccccggccggccgccgtcggtctccg 692 Query: 529 gcggccggaccgccagcgtctcctccgactacaacaagagggagagggacggcgataccg 588 |||||||||||||||| |||| |||||| ||||||||||||||| || ||||| |||| Sbjct: 693 gcggccggaccgccagtgtctgctccgatcgcaacaagagggagagagatggcgagaccg 752 Query: 589 tcaagtgctggccgctgctgtgggatcggcggtggtggaagtcgagccggcgaga 643 | ||||||| ||||||||||||||||||||||| | |||||||||||| |||| Sbjct: 753 tgcggtgctggtcgctgctgtgggatcggcggtggcgcaagtcgagccggggaga 807 Score = 224 bits (113), Expect = 5e-55 Identities = 148/159 (93%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 100 tgtgggtccccgggatgagcccgcaggcggtggatgggggg---tcggcgagggcgcagg 156 ||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 249 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 308 Query: 157 agatcgcgcgggggcgggaggagctgctcgggatgctgcaggacctccccgagtccgagt 216 ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 309 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 368 Query: 217 acgagctctcgctcaccgacctcgtcgagaaggccggcg 255 |||||||||||||||| |||||||||||||||||||||| Sbjct: 369 acgagctctcgctcacggacctcgtcgagaaggccggcg 407 >dbj|AK060370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-B02, full insert sequence Length = 1016 Score = 293 bits (148), Expect = 7e-76 Identities = 257/295 (87%), Gaps = 15/295 (5%) Strand = Plus / Plus Query: 364 cggcggcggcggggaggccggagaggagggggtccgcgaggcggtgggacagcggg---- 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 513 cggcggcggcggggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcg 572 Query: 420 --agcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccccgctccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 573 gcagcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccacgctcct 632 Query: 478 tcacccgcagcttcaccgcgccgc---------gcccctgccgcccgccgtcggtatccg 528 |||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct: 633 tcacccgcagcttcaccgcgccgcgcaccactggccccggccggccgccgtcggtctccg 692 Query: 529 gcggccggaccgccagcgtctcctccgactacaacaagagggagagggacggcgataccg 588 |||||||||||||||| |||| |||||| | ||||||||||||| || ||||| |||| Sbjct: 693 gcggccggaccgccagtgtctgctccgatcgcgacaagagggagagagatggcgagaccg 752 Query: 589 tcaagtgctggccgctgctgtgggatcggcggtggtggaagtcgagccggcgaga 643 | ||||||| ||||||||||||||||||||||| | |||||||||||| |||| Sbjct: 753 tgcggtgctggtcgctgctgtgggatcggcggtggcgcaagtcgagccggggaga 807 Score = 224 bits (113), Expect = 5e-55 Identities = 148/159 (93%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 100 tgtgggtccccgggatgagcccgcaggcggtggatgggggg---tcggcgagggcgcagg 156 ||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 249 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 308 Query: 157 agatcgcgcgggggcgggaggagctgctcgggatgctgcaggacctccccgagtccgagt 216 ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 309 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 368 Query: 217 acgagctctcgctcaccgacctcgtcgagaaggccggcg 255 |||||||||||||||| |||||||||||||||||||||| Sbjct: 369 acgagctctcgctcacggacctcgtcgagaaggccggcg 407 >emb|CT833438.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112G22, full insert sequence Length = 983 Score = 285 bits (144), Expect = 2e-73 Identities = 256/295 (86%), Gaps = 15/295 (5%) Strand = Plus / Plus Query: 364 cggcggcggcggggaggccggagaggagggggtccgcgaggcggtgggacagcggg---- 419 ||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | Sbjct: 357 cggcggcggcgggagggccggagaggagggggtcggcgaggcggtgggacagcgcgggcg 416 Query: 420 --agcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccccgctccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 417 gcagcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccacgctcct 476 Query: 478 tcacccgcagcttcaccgcgccgc---------gcccctgccgcccgccgtcggtatccg 528 |||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct: 477 tcacccgcagcttcaccgcgccgcgcaccactggccccggccggccgccgtcggtctccg 536 Query: 529 gcggccggaccgccagcgtctcctccgactacaacaagagggagagggacggcgataccg 588 |||||||||||||||| |||| |||||| ||||||||||||||| |||||||| || | Sbjct: 537 gcggccggaccgccagtgtctgctccgatcgcaacaagagggagagagacggcgagactg 596 Query: 589 tcaagtgctggccgctgctgtgggatcggcggtggtggaagtcgagccggcgaga 643 | ||||||| ||||||||||||||||||||||| | |||||||||||| |||| Sbjct: 597 tgcggtgctggtcgctgctgtgggatcggcggtggcgcaagtcgagccggggaga 651 Score = 224 bits (113), Expect = 5e-55 Identities = 148/159 (93%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 100 tgtgggtccccgggatgagcccgcaggcggtggatgggggg---tcggcgagggcgcagg 156 ||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 93 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 152 Query: 157 agatcgcgcgggggcgggaggagctgctcgggatgctgcaggacctccccgagtccgagt 216 ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 153 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 212 Query: 217 acgagctctcgctcaccgacctcgtcgagaaggccggcg 255 |||||||||||||||| |||||||||||||||||||||| Sbjct: 213 acgagctctcgctcacggacctcgtcgagaaggccggcg 251 >gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 234 bits (118), Expect = 5e-58 Identities = 194/221 (87%), Gaps = 15/221 (6%) Strand = Plus / Plus Query: 364 cggcggcggcggggaggccggagaggagggggtccgcgaggcggtgggacagcggg---- 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 125912 cggcggcggcggggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcg 125971 Query: 420 --agcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccccgctccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 125972 gcagcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccacgctcct 126031 Query: 478 tcacccgcagcttcaccgcgccgc---------gcccctgccgcccgccgtcggtatccg 528 |||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct: 126032 tcacccgcagcttcaccgcgccgcgcaccactggccccggccggccgccgtcggtctccg 126091 Query: 529 gcggccggaccgccagcgtctcctccgactacaacaagagg 569 |||||||||||||||| |||| |||||| |||||||||| Sbjct: 126092 gcggccggaccgccagtgtctgctccgatcgcaacaagagg 126132 Score = 224 bits (113), Expect = 5e-55 Identities = 148/159 (93%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 100 tgtgggtccccgggatgagcccgcaggcggtggatgggggg---tcggcgagggcgcagg 156 ||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 125648 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 125707 Query: 157 agatcgcgcgggggcgggaggagctgctcgggatgctgcaggacctccccgagtccgagt 216 ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 125708 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 125767 Query: 217 acgagctctcgctcaccgacctcgtcgagaaggccggcg 255 |||||||||||||||| |||||||||||||||||||||| Sbjct: 125768 acgagctctcgctcacggacctcgtcgagaaggccggcg 125806 >gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 234 bits (118), Expect = 5e-58 Identities = 194/221 (87%), Gaps = 15/221 (6%) Strand = Plus / Plus Query: 364 cggcggcggcggggaggccggagaggagggggtccgcgaggcggtgggacagcggg---- 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 1582 cggcggcggcggggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcg 1641 Query: 420 --agcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccccgctccc 477 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1642 gcagcagcttccgcagcagcagcgacggcgtcctgctcaacttctacatgccacgctcct 1701 Query: 478 tcacccgcagcttcaccgcgccgc---------gcccctgccgcccgccgtcggtatccg 528 |||||||||||||||||||||||| ||||| |||| ||||||||||| |||| Sbjct: 1702 tcacccgcagcttcaccgcgccgcgcaccactggccccggccggccgccgtcggtctccg 1761 Query: 529 gcggccggaccgccagcgtctcctccgactacaacaagagg 569 |||||||||||||||| |||| |||||| |||||||||| Sbjct: 1762 gcggccggaccgccagtgtctgctccgatcgcaacaagagg 1802 Score = 224 bits (113), Expect = 5e-55 Identities = 148/159 (93%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 100 tgtgggtccccgggatgagcccgcaggcggtggatgggggg---tcggcgagggcgcagg 156 ||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 1318 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 1377 Query: 157 agatcgcgcgggggcgggaggagctgctcgggatgctgcaggacctccccgagtccgagt 216 ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1378 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 1437 Query: 217 acgagctctcgctcaccgacctcgtcgagaaggccggcg 255 |||||||||||||||| |||||||||||||||||||||| Sbjct: 1438 acgagctctcgctcacggacctcgtcgagaaggccggcg 1476