BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110c23 (1068 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830405.1| Oryza sativa (indica cultivar-group) cDNA clone:... 246 2e-61 ref|NM_001055579.1| Oryza sativa (japonica cultivar-group) Os03g... 246 2e-61 dbj|AK059911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 2e-61 gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome... 165 5e-37 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 >emb|CT830405.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115G10, full insert sequence Length = 1376 Score = 246 bits (124), Expect = 2e-61 Identities = 163/176 (92%) Strand = Plus / Plus Query: 558 ggaggcacatgcaagaacggcacaggtctcagctaccactgcgagtgcaatgagggtttc 617 ||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||| Sbjct: 748 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 807 Query: 618 agcaaccttctgaacatcacaacaatgccttgttttcagaactgttcaatcggtgcggat 677 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 808 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 867 Query: 678 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgcaccacc 733 ||||||||||||||| || ||||| ||||||||||||||| |||||||||||||| Sbjct: 868 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgcaccacc 923 Score = 206 bits (104), Expect = 1e-49 Identities = 193/222 (86%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 309 acggtggcgtgcgggaaggggaactgcacggtgacgtcggggattccggggtacaggtgc 368 ||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||| Sbjct: 363 acggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgc 422 Query: 369 gagtgcgagccggggtgggcgcagatgcacgtcggcgacgagttcacgttcctgccatgc 428 ||||||||||| |||||| ||||||||||||||||||| || || |||||||| ||| Sbjct: 423 gagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgc 482 Query: 429 gtcatccccaactgttcccttgatcgtacatgctctaacactacttcagcacctgcagcg 488 |||||||||||||||||| |||| ||| |||| |||||||||| |||||| ||| | Sbjct: 483 gtcatccccaactgttccattgaccgtgcatgttctaacacta---tagcaccagcacct 539 Query: 489 gcgcttgtaccaccacccaaaaatttctccctctcaccagac 530 |||| | ||||| |||||||||||||||||||| || ||||| Sbjct: 540 gcgcctttaccatcacccaaaaatttctccctcccaacagac 581 >ref|NM_001055579.1| Oryza sativa (japonica cultivar-group) Os03g0161500 (Os03g0161500) mRNA, complete cds Length = 1172 Score = 246 bits (124), Expect = 2e-61 Identities = 163/176 (92%) Strand = Plus / Plus Query: 558 ggaggcacatgcaagaacggcacaggtctcagctaccactgcgagtgcaatgagggtttc 617 ||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||| Sbjct: 693 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 752 Query: 618 agcaaccttctgaacatcacaacaatgccttgttttcagaactgttcaatcggtgcggat 677 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 753 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 812 Query: 678 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgcaccacc 733 ||||||||||||||| || ||||| ||||||||||||||| |||||||||||||| Sbjct: 813 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgcaccacc 868 Score = 206 bits (104), Expect = 1e-49 Identities = 193/222 (86%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 309 acggtggcgtgcgggaaggggaactgcacggtgacgtcggggattccggggtacaggtgc 368 ||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||| Sbjct: 308 acggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgc 367 Query: 369 gagtgcgagccggggtgggcgcagatgcacgtcggcgacgagttcacgttcctgccatgc 428 ||||||||||| |||||| ||||||||||||||||||| || || |||||||| ||| Sbjct: 368 gagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgc 427 Query: 429 gtcatccccaactgttcccttgatcgtacatgctctaacactacttcagcacctgcagcg 488 |||||||||||||||||| |||| ||| |||| |||||||||| |||||| ||| | Sbjct: 428 gtcatccccaactgttccattgaccgtgcatgttctaacacta---tagcaccagcacct 484 Query: 489 gcgcttgtaccaccacccaaaaatttctccctctcaccagac 530 |||| | ||||| |||||||||||||||||||| || ||||| Sbjct: 485 gcgcctttaccatcacccaaaaatttctccctcccaacagac 526 >dbj|AK059911.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C11, full insert sequence Length = 1172 Score = 246 bits (124), Expect = 2e-61 Identities = 163/176 (92%) Strand = Plus / Plus Query: 558 ggaggcacatgcaagaacggcacaggtctcagctaccactgcgagtgcaatgagggtttc 617 ||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||| Sbjct: 693 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 752 Query: 618 agcaaccttctgaacatcacaacaatgccttgttttcagaactgttcaatcggtgcggat 677 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 753 agtaaccttctgaacatcaccacaatgccatgttttcagaattgttcaatcggtgcggat 812 Query: 678 tgcgcaagcatagggatccttccattctcaaactcttccaggtctcctgcaccacc 733 ||||||||||||||| || ||||| ||||||||||||||| |||||||||||||| Sbjct: 813 tgcgcaagcatagggctctctccatcctcaaactcttccagttctcctgcaccacc 868 Score = 206 bits (104), Expect = 1e-49 Identities = 193/222 (86%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 309 acggtggcgtgcgggaaggggaactgcacggtgacgtcggggattccggggtacaggtgc 368 ||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||| Sbjct: 308 acggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgc 367 Query: 369 gagtgcgagccggggtgggcgcagatgcacgtcggcgacgagttcacgttcctgccatgc 428 ||||||||||| |||||| ||||||||||||||||||| || || |||||||| ||| Sbjct: 368 gagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgc 427 Query: 429 gtcatccccaactgttcccttgatcgtacatgctctaacactacttcagcacctgcagcg 488 |||||||||||||||||| |||| ||| |||| |||||||||| |||||| ||| | Sbjct: 428 gtcatccccaactgttccattgaccgtgcatgttctaacacta---tagcaccagcacct 484 Query: 489 gcgcttgtaccaccacccaaaaatttctccctctcaccagac 530 |||| | ||||| |||||||||||||||||||| || ||||| Sbjct: 485 gcgcctttaccatcacccaaaaatttctccctcccaacagac 526 >gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 165 bits (83), Expect = 5e-37 Identities = 122/135 (90%) Strand = Plus / Minus Query: 309 acggtggcgtgcgggaaggggaactgcacggtgacgtcggggattccggggtacaggtgc 368 ||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||| Sbjct: 132345 acggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgc 132286 Query: 369 gagtgcgagccggggtgggcgcagatgcacgtcggcgacgagttcacgttcctgccatgc 428 ||||||||||| |||||| ||||||||||||||||||| || || |||||||| ||| Sbjct: 132285 gagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgc 132226 Query: 429 gtcatccccaactgt 443 ||||||||||||||| Sbjct: 132225 gtcatccccaactgt 132211 Score = 145 bits (73), Expect = 4e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 558 ggaggcacatgcaagaacggcacaggtctcagctaccactgcgagtgcaatgagggtttc 617 ||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||| Sbjct: 130823 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 130764 Query: 618 agcaaccttctgaacatcacaacaatgccttgttttcagaa 658 || ||||||||||||||||| |||||||| ||||||||||| Sbjct: 130763 agtaaccttctgaacatcaccacaatgccatgttttcagaa 130723 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 661 gttcaatcggtgcggattgcgcaagcatagggatccttccattctcaaactcttccaggt 720 |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct: 130635 gttcaatcggtgcggattgcgcaagcatagggctctctccatcctcaaactcttccagtt 130576 Query: 721 ctcctgcaccacc 733 ||||||||||||| Sbjct: 130575 ctcctgcaccacc 130563 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 165 bits (83), Expect = 5e-37 Identities = 122/135 (90%) Strand = Plus / Plus Query: 309 acggtggcgtgcgggaaggggaactgcacggtgacgtcggggattccggggtacaggtgc 368 ||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||| Sbjct: 3296980 acggtggcgtgcgggaaggggaactgcacggcggcgtcggggttcccggggtacaggtgc 3297039 Query: 369 gagtgcgagccggggtgggcgcagatgcacgtcggcgacgagttcacgttcctgccatgc 428 ||||||||||| |||||| ||||||||||||||||||| || || |||||||| ||| Sbjct: 3297040 gagtgcgagcctgggtggaagcagatgcacgtcggcgaccaggccagcttcctgccctgc 3297099 Query: 429 gtcatccccaactgt 443 ||||||||||||||| Sbjct: 3297100 gtcatccccaactgt 3297114 Score = 145 bits (73), Expect = 4e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 558 ggaggcacatgcaagaacggcacaggtctcagctaccactgcgagtgcaatgagggtttc 617 ||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||| Sbjct: 3298502 ggaggcacatgcaagaatgggacaggcctcagctaccactgcgagtgcagtgagggtttc 3298561 Query: 618 agcaaccttctgaacatcacaacaatgccttgttttcagaa 658 || ||||||||||||||||| |||||||| ||||||||||| Sbjct: 3298562 agtaaccttctgaacatcaccacaatgccatgttttcagaa 3298602 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 661 gttcaatcggtgcggattgcgcaagcatagggatccttccattctcaaactcttccaggt 720 |||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct: 3298690 gttcaatcggtgcggattgcgcaagcatagggctctctccatcctcaaactcttccagtt 3298749 Query: 721 ctcctgcaccacc 733 ||||||||||||| Sbjct: 3298750 ctcctgcaccacc 3298762