BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110b10 (1190 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072958.1| Oryza sativa (japonica cultivar-group) Os12g... 716 0.0 gb|BT017167.1| Zea mays clone EL01N0368H01.c mRNA sequence 632 e-178 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 170 8e-39 emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427... 170 8e-39 >ref|NM_001072958.1| Oryza sativa (japonica cultivar-group) Os12g0225200 (Os12g0225200) mRNA, complete cds Length = 1032 Score = 716 bits (361), Expect = 0.0 Identities = 598/677 (88%) Strand = Plus / Plus Query: 288 ccgcctcccgaggtcgcgctcctggcgcgcaacttctccgtcgtcgtcgacaccgcctcc 347 ||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||| || Sbjct: 292 ccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagcc 351 Query: 348 cgcggcgccgtgctgcggggcgccgctgacctcgccggctcgctgcgcctgcgcgccgcg 407 || ||||| |||||||||||||||| ||||||||||| ||||| ||||| ||||| | Sbjct: 352 cgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaag 411 Query: 408 cacaacaccaaggagcaacaaggagaagtggcagtaactacaaatttgggagattcacca 467 ||| |||||||||||||| |||| |||||||| || | |||||||||| ||||||||| Sbjct: 412 cacgacaccaaggagcaaaaaggggaagtggcggtgagagcaaatttgggtgattcacca 471 Query: 468 tgcaagattgaattatcatctctggttcctcctgatggattgccaagagcaaccttcatc 527 ||||||||||| ||||||||| ||||||| |||||||||||||| || ||||||||||| Sbjct: 472 tgcaagattgagttatcatctgtggttccacctgatggattgccgaggacaaccttcatc 531 Query: 528 tttcccaatggtgaagtttcagttaaggagaagaaactagatgagggtgagaaaattttg 587 ||||||||||||||||||||||||||| |||| | | ||||| ||||| | |||||| Sbjct: 532 tttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtgacaggattttg 591 Query: 588 ttagtaaatggtttagtgaagtctcatgttctgaatggagtttgcaccgcattgtacaat 647 | |||||| || |||||| ||||||||||||||||||||||||||| |||||||||| | Sbjct: 592 tcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactgcattgtacagt 651 Query: 648 gataatgagatgaacataaaatatcgctataaggatgatgagctatcatttattcccagc 707 || ||||||||||||||||||||||| || |||||||| ||| ||||||||||||| ||| Sbjct: 652 gacaatgagatgaacataaaatatcgttacaaggatgaagagttatcatttattccaagc 711 Query: 708 atcactttaccatcaaattcattatccttcgcatttaagcgccagttaactccttcagac 767 || |||||||||| |||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 712 ctctctttaccatccaattcactatcctttgcatttaagcgccaattcactccttcagac 771 Query: 768 aagttaagctattggtaccattttgacacaaactactggagtgctgtctataaacacaat 827 ||||||||||| ||||||| ||||||||||||||||||||| | ||||||||||||| Sbjct: 772 aagttaagctaccggtaccagtttgacacaaactactggagttttatctataaacacaag 831 Query: 828 gctagtaagcatgtcaagtggaaagctggttatgagtcagacgaaaggcttggatgggca 887 || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 832 gccagtaagcatgtcaagtggaaagctggttatgagtctgaccaaaggcttggatgggca 891 Query: 888 tctctttgggttggagatgcaggcggcaagacaaaggaggtgcctatgaagacgaaaatt 947 ||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||| || Sbjct: 892 tctctttgggttggagatgcagggggcaagacgaaggaggtgcctatgaaggctaaagtt 951 Query: 948 cagttcatgcttaaagt 964 ||||| | ||||||||| Sbjct: 952 cagttgacgcttaaagt 968 Score = 129 bits (65), Expect = 3e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 149 gcggcggcggccggccgtccgggtgacctcggagttcgacagcgagcgccggctcttctc 208 |||| ||||| |||| ||||| || |||||||||||||||||||| |||||||||||| Sbjct: 135 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 194 Query: 209 ccaccgcctttcctgccgggtcctcgacggcctcgccaagctccgcctccggctccacca 268 ||||||||| |||||||| ||| | |||||||||||||||||||| ||||| ||||||| Sbjct: 195 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 254 Query: 269 cgggg 273 ||||| Sbjct: 255 cgggg 259 >gb|BT017167.1| Zea mays clone EL01N0368H01.c mRNA sequence Length = 1324 Score = 632 bits (319), Expect = e-178 Identities = 622/723 (86%) Strand = Plus / Plus Query: 305 gctcctggcgcgcaacttctccgtcgtcgtcgacaccgcctcccgcggcgccgtgctgcg 364 |||||||||||| ||||||||||||||||||||| | || |||| |||||||||||||| Sbjct: 283 gctcctggcgcggaacttctccgtcgtcgtcgaccctgcaacccgaggcgccgtgctgcg 342 Query: 365 gggcgccgctgacctcgccggctcgctgcgcctgcgcgccgcgcacaacaccaaggagca 424 |||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| Sbjct: 343 cggcgccgccgacctcgccggctcgctgcgactgcgcgcctcgcacaacaccaaagagca 402 Query: 425 acaaggagaagtggcagtaactacaaatttgggagattcaccatgcaagattgaattatc 484 |||||||||||||||| | ||| |||||||| | ||||||||||||||||||||| | || Sbjct: 403 acaaggagaagtggcaattactgcaaatttgagggattcaccatgcaagattgaactgtc 462 Query: 485 atctctggttcctcctgatggattgccaagagcaaccttcatctttcccaatggtgaagt 544 |||||||||||||||| ||||| |||||||||||| || ||||||| ||||||||||| Sbjct: 463 atctctggttcctcctaatggaccgccaagagcaacttttttctttccaaatggtgaagt 522 Query: 545 ttcagttaaggagaagaaactagatgagggtgagaaaattttgttagtaaatggtttagt 604 ||| |||| ||||||| | |||||| |||| | |||||||| ||||||||| |||| Sbjct: 523 ctcaattaaagagaagattttggatgagcgtgacagaattttgtcagtaaatggcctagt 582 Query: 605 gaagtctcatgttctgaatggagtttgcaccgcattgtacaatgataatgagatgaacat 664 |||||| | ||||||| ||||||||||||| || ||||||||||||||| |||| ||| Sbjct: 583 gaagtcacgtgttctgcatggagtttgcacagctgtgtacaatgataatgtaatgagcat 642 Query: 665 aaaatatcgctataaggatgatgagctatcatttattcccagcatcactttaccatcaaa 724 ||||| ||||| |||||||||||| |||| ||||| ||||||||| | |||||||| || Sbjct: 643 taaataccgctacaaggatgatgaggtatcgtttatccccagcatctcattaccatccaa 702 Query: 725 ttcattatccttcgcatttaagcgccagttaactccttcagacaagttaagctattggta 784 ||| | || || ||||| |||||||| ||||| |||| |||||||| ||||||||||| Sbjct: 703 ttctctgtcatttgcattcaagcgccaattaacgcctttggacaagttgagctattggta 762 Query: 785 ccattttgacacaaactactggagtgctgtctataaacacaatgctagtaagcatgtcaa 844 | |||||||||||||||||||| | || |||| |||||||| ||| |||||| |||| Sbjct: 763 caattttgacacaaactactggggcgccatctacaaacacaaggctcacaagcatctcaa 822 Query: 845 gtggaaagctggttatgagtcagacgaaaggcttggatgggcatctctttgggttggaga 904 |||||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 823 gtggaaagctggctatgagtcagacaacaggcttggatgggcatcgctttgggttggaga 882 Query: 905 tgcaggcggcaagacaaaggaggtgcctatgaagacgaaaattcagttcatgcttaaagt 964 ||| ||||||| |||||||||| |||| |||| | |||||||| ||| ||||||||| Sbjct: 883 tgctggcggcagtacaaaggaggcgcctttgaaagccaaaattcacctcacgcttaaagt 942 Query: 965 ccctcagggcaatatacaaaattcagttgtattgttccgagtgaagaaaagatgggactt 1024 ||| |||| ||||||||| |||||||||||| |||||| || |||||||||||||| || Sbjct: 943 cccccaggacaatatacagaattcagttgtagtgttccatgttaagaaaagatgggattt 1002 Query: 1025 tta 1027 ||| Sbjct: 1003 tta 1005 Score = 145 bits (73), Expect = 5e-31 Identities = 91/97 (93%) Strand = Plus / Plus Query: 163 ccgtccgggtgacctcggagttcgacagcgagcgccggctcttctcccaccgcctttcct 222 ||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||| Sbjct: 132 ccgtccgcgtgacctcggagtttgacagcgaacgacggctcttctcccaccgcctctcct 191 Query: 223 gccgggtcctcgacggcctcgccaagctccgcctccg 259 |||| |||||||||||||||||||||||||||||||| Sbjct: 192 gccgcgtcctcgacggcctcgccaagctccgcctccg 228 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 170 bits (86), Expect = 8e-39 Identities = 110/118 (93%) Strand = Plus / Plus Query: 781 ggtaccattttgacacaaactactggagtgctgtctataaacacaatgctagtaagcatg 840 ||||||| ||||||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 6813543 ggtaccagtttgacacaaactactggagttttatctataaacacaaggccagtaagcatg 6813602 Query: 841 tcaagtggaaagctggttatgagtcagacgaaaggcttggatgggcatctctttgggt 898 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 6813603 tcaagtggaaagctggttatgagtctgaccaaaggcttggatgggcatctctttgggt 6813660 Score = 168 bits (85), Expect = 3e-38 Identities = 139/157 (88%) Strand = Plus / Plus Query: 517 caaccttcatctttcccaatggtgaagtttcagttaaggagaagaaactagatgagggtg 576 |||||||||||||||||||||||||||||||||||||| |||| | | ||||| |||| Sbjct: 6812731 caaccttcatctttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtg 6812790 Query: 577 agaaaattttgttagtaaatggtttagtgaagtctcatgttctgaatggagtttgcaccg 636 | | ||||||| |||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 6812791 acaggattttgtcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactg 6812850 Query: 637 cattgtacaatgataatgagatgaacataaaatatcg 673 ||||||||| ||| ||||||||||||||||||||||| Sbjct: 6812851 cattgtacagtgacaatgagatgaacataaaatatcg 6812887 Score = 129 bits (65), Expect = 3e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 149 gcggcggcggccggccgtccgggtgacctcggagttcgacagcgagcgccggctcttctc 208 |||| ||||| |||| ||||| || |||||||||||||||||||| |||||||||||| Sbjct: 6810373 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 6810432 Query: 209 ccaccgcctttcctgccgggtcctcgacggcctcgccaagctccgcctccggctccacca 268 ||||||||| |||||||| ||| | |||||||||||||||||||| ||||| ||||||| Sbjct: 6810433 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 6810492 Query: 269 cgggg 273 ||||| Sbjct: 6810493 cgggg 6810497 Score = 121 bits (61), Expect = 7e-24 Identities = 115/133 (86%) Strand = Plus / Plus Query: 288 ccgcctcccgaggtcgcgctcctggcgcgcaacttctccgtcgtcgtcgacaccgcctcc 347 ||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||| || Sbjct: 6810530 ccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagcc 6810589 Query: 348 cgcggcgccgtgctgcggggcgccgctgacctcgccggctcgctgcgcctgcgcgccgcg 407 || ||||| |||||||||||||||| ||||||||||| ||||| ||||| ||||| | Sbjct: 6810590 cgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaag 6810649 Query: 408 cacaacaccaagg 420 ||| ||||||||| Sbjct: 6810650 cacgacaccaagg 6810662 Score = 113 bits (57), Expect = 2e-21 Identities = 87/97 (89%) Strand = Plus / Plus Query: 679 aggatgatgagctatcatttattcccagcatcactttaccatcaaattcattatccttcg 738 ||||||| ||| ||||||||||||| ||| || |||||||||| |||||| ||||||| | Sbjct: 6813013 aggatgaagagttatcatttattccaagcctctctttaccatccaattcactatcctttg 6813072 Query: 739 catttaagcgccagttaactccttcagacaagttaag 775 ||||||||||||| || |||||||||||||||||||| Sbjct: 6813073 catttaagcgccaattcactccttcagacaagttaag 6813109 Score = 95.6 bits (48), Expect = 4e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 418 aggagcaacaaggagaagtggcagtaactacaaatttgggagattcaccatgcaagattg 477 |||||||| |||| |||||||| || | |||||||||| ||||||||||||||||||| Sbjct: 6812493 aggagcaaaaaggggaagtggcggtgagagcaaatttgggtgattcaccatgcaagattg 6812552 Query: 478 aattatcatctctggttcctcctgatggattg 509 | ||||||||| ||||||| |||||||||||| Sbjct: 6812553 agttatcatctgtggttccacctgatggattg 6812584 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 896 ggttggagatgcaggcggcaagacaaaggaggtgcctatgaagacgaaaattcagttcat 955 ||||||||||||||| |||||||| |||||||||||||||||| | ||| ||||||| | Sbjct: 6813883 ggttggagatgcagggggcaagacgaaggaggtgcctatgaaggctaaagttcagttgac 6813942 Query: 956 gcttaaagt 964 ||||||||| Sbjct: 6813943 gcttaaagt 6813951 >emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427_C06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 88558 Score = 170 bits (86), Expect = 8e-39 Identities = 110/118 (93%) Strand = Plus / Minus Query: 781 ggtaccattttgacacaaactactggagtgctgtctataaacacaatgctagtaagcatg 840 ||||||| ||||||||||||||||||||| | ||||||||||||| || |||||||||| Sbjct: 4985 ggtaccagtttgacacaaactactggagttttatctataaacacaaggccagtaagcatg 4926 Query: 841 tcaagtggaaagctggttatgagtcagacgaaaggcttggatgggcatctctttgggt 898 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 4925 tcaagtggaaagctggttatgagtctgaccaaaggcttggatgggcatctctttgggt 4868 Score = 168 bits (85), Expect = 3e-38 Identities = 139/157 (88%) Strand = Plus / Minus Query: 517 caaccttcatctttcccaatggtgaagtttcagttaaggagaagaaactagatgagggtg 576 |||||||||||||||||||||||||||||||||||||| |||| | | ||||| |||| Sbjct: 5797 caaccttcatctttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtg 5738 Query: 577 agaaaattttgttagtaaatggtttagtgaagtctcatgttctgaatggagtttgcaccg 636 | | ||||||| |||||| || |||||| ||||||||||||||||||||||||||| | Sbjct: 5737 acaggattttgtcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactg 5678 Query: 637 cattgtacaatgataatgagatgaacataaaatatcg 673 ||||||||| ||| ||||||||||||||||||||||| Sbjct: 5677 cattgtacagtgacaatgagatgaacataaaatatcg 5641 Score = 129 bits (65), Expect = 3e-26 Identities = 110/125 (88%) Strand = Plus / Minus Query: 149 gcggcggcggccggccgtccgggtgacctcggagttcgacagcgagcgccggctcttctc 208 |||| ||||| |||| ||||| || |||||||||||||||||||| |||||||||||| Sbjct: 8155 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 8096 Query: 209 ccaccgcctttcctgccgggtcctcgacggcctcgccaagctccgcctccggctccacca 268 ||||||||| |||||||| ||| | |||||||||||||||||||| ||||| ||||||| Sbjct: 8095 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 8036 Query: 269 cgggg 273 ||||| Sbjct: 8035 cgggg 8031 Score = 121 bits (61), Expect = 7e-24 Identities = 115/133 (86%) Strand = Plus / Minus Query: 288 ccgcctcccgaggtcgcgctcctggcgcgcaacttctccgtcgtcgtcgacaccgcctcc 347 ||||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||| || Sbjct: 7998 ccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagcc 7939 Query: 348 cgcggcgccgtgctgcggggcgccgctgacctcgccggctcgctgcgcctgcgcgccgcg 407 || ||||| |||||||||||||||| ||||||||||| ||||| ||||| ||||| | Sbjct: 7938 cgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaag 7879 Query: 408 cacaacaccaagg 420 ||| ||||||||| Sbjct: 7878 cacgacaccaagg 7866 Score = 113 bits (57), Expect = 2e-21 Identities = 87/97 (89%) Strand = Plus / Minus Query: 679 aggatgatgagctatcatttattcccagcatcactttaccatcaaattcattatccttcg 738 ||||||| ||| ||||||||||||| ||| || |||||||||| |||||| ||||||| | Sbjct: 5515 aggatgaagagttatcatttattccaagcctctctttaccatccaattcactatcctttg 5456 Query: 739 catttaagcgccagttaactccttcagacaagttaag 775 ||||||||||||| || |||||||||||||||||||| Sbjct: 5455 catttaagcgccaattcactccttcagacaagttaag 5419 Score = 95.6 bits (48), Expect = 4e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 418 aggagcaacaaggagaagtggcagtaactacaaatttgggagattcaccatgcaagattg 477 |||||||| |||| |||||||| || | |||||||||| ||||||||||||||||||| Sbjct: 6035 aggagcaaaaaggggaagtggcggtgagagcaaatttgggtgattcaccatgcaagattg 5976 Query: 478 aattatcatctctggttcctcctgatggattg 509 | ||||||||| ||||||| |||||||||||| Sbjct: 5975 agttatcatctgtggttccacctgatggattg 5944 Score = 81.8 bits (41), Expect = 6e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 896 ggttggagatgcaggcggcaagacaaaggaggtgcctatgaagacgaaaattcagttcat 955 ||||||||||||||| |||||||| |||||||||||||||||| | ||| ||||||| | Sbjct: 4645 ggttggagatgcagggggcaagacgaaggaggtgcctatgaaggctaaagttcagttgac 4586 Query: 956 gcttaaagt 964 ||||||||| Sbjct: 4585 gcttaaagt 4577