BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem110a21 (1003 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056082.1| Oryza sativa (japonica cultivar-group) Os03g... 698 0.0 dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 698 0.0 gb|DQ244991.1| Zea mays clone 12072 mRNA sequence 595 e-166 gb|AY105486.1| Zea mays PCO104538 mRNA sequence 559 e-156 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 220 8e-54 >ref|NM_001056082.1| Oryza sativa (japonica cultivar-group) Os03g0247000 (Os03g0247000) mRNA, complete cds Length = 1093 Score = 698 bits (352), Expect = 0.0 Identities = 561/628 (89%), Gaps = 2/628 (0%) Strand = Plus / Plus Query: 107 cctcctcctccctctccttcctggcaacccctgtcctgcccgcctccctccggaccgctg 166 |||| |||||| |||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 151 cctcatcctccgtctccttcctggcagcccgtgtgctgcccgcctccctcagggccgctg 210 Query: 167 ccgcggggggccca-ctcctcgcctcccgctgccggagccgccgtgtcgccgccgtcgtc 225 |||||||| |||| || | ||||||||||| |||| |||| ||||||| ||||||||| Sbjct: 211 ccgcggggtccccaacttc-cgcctcccgctcccggggccgaggtgtcgcggccgtcgtc 269 Query: 226 gctcagcttcccactacgaatccagaggttgcttctggggagaagaaaatccggtggtca 285 |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 270 gctcagctccccaccgcgaatccagaggtggcttctggggagaagaagatccggtggtca 329 Query: 286 tcaagggcggtgcggtcatttgcgttggcggagctggaggcacggaagatgaggtaccca 345 ||| | |||||| |||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 330 tcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatgaggtaccca 389 Query: 346 accacaggcactgaggggctccttatgggcatcctcgtcgagggaactagcgacgcagca 405 ||||| |||||||| || ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 390 accactggcactgaaggactcctcatgggcatccttgtcgagggaactagtgatgcagca 449 Query: 406 aaacttatgcgtgctaatggaattacgctgctcacagtgcgtgaggaggctgcgaatgta 465 |||||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct: 450 aaacttttgcgtgctaatggaattacgctgctcaaagtgcgcgaggaggcagcaaatgtg 509 Query: 466 cttgggaagtcagaaatgttttatttcagtcctatgcatccaccattgacagaagctgca 525 |||||||| ||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 510 cttgggaaatcagaaatgttctactttagtcctatgcacccaccattgactgaagctgca 569 Query: 526 caacgagcccttgattgggctgtaaatgagaaactgaaatcaggtgaagctggagaggta 585 |||||||| |||||||||||| | ||||| ||||||||||||||||||| |||||| ||| Sbjct: 570 caacgagcgcttgattgggctatcaatgaaaaactgaaatcaggtgaagatggagaagta 629 Query: 586 acggccaatcatttgttcctggggatatggtcagataaagagtcagctggtcataagata 645 || ||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 630 accgccaatcatctgctcctggggatatggtcagataaagagtcagctggtcataaagta 689 Query: 646 ctggcttcccttggttttgatgatgagaaagccagtttgctggctaaaacggctagcgaa 705 ||||||||||||||||||||||||||| ||||| || ||||| ||||||||| | ||| Sbjct: 690 ttggcttcccttggttttgatgatgagagagccaattcactggccaaaacggctggtgaa 749 Query: 706 gaggctgcaatgagtcctagatagcaaa 733 |||||||| ||||||||||||||||||| Sbjct: 750 gaggctgctatgagtcctagatagcaaa 777 Score = 91.7 bits (46), Expect = 5e-15 Identities = 46/46 (100%) Strand = Plus / Plus Query: 21 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 66 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 98 >dbj|AK100847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123H08, full insert sequence Length = 1094 Score = 698 bits (352), Expect = 0.0 Identities = 561/628 (89%), Gaps = 2/628 (0%) Strand = Plus / Plus Query: 107 cctcctcctccctctccttcctggcaacccctgtcctgcccgcctccctccggaccgctg 166 |||| |||||| |||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 152 cctcatcctccgtctccttcctggcagcccgtgtgctgcccgcctccctcagggccgctg 211 Query: 167 ccgcggggggccca-ctcctcgcctcccgctgccggagccgccgtgtcgccgccgtcgtc 225 |||||||| |||| || | ||||||||||| |||| |||| ||||||| ||||||||| Sbjct: 212 ccgcggggtccccaacttc-cgcctcccgctcccggggccgaggtgtcgcggccgtcgtc 270 Query: 226 gctcagcttcccactacgaatccagaggttgcttctggggagaagaaaatccggtggtca 285 |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 271 gctcagctccccaccgcgaatccagaggtggcttctggggagaagaagatccggtggtca 330 Query: 286 tcaagggcggtgcggtcatttgcgttggcggagctggaggcacggaagatgaggtaccca 345 ||| | |||||| |||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 331 tcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatgaggtaccca 390 Query: 346 accacaggcactgaggggctccttatgggcatcctcgtcgagggaactagcgacgcagca 405 ||||| |||||||| || ||||| ||||||||||| |||||||||||||| || |||||| Sbjct: 391 accactggcactgaaggactcctcatgggcatccttgtcgagggaactagtgatgcagca 450 Query: 406 aaacttatgcgtgctaatggaattacgctgctcacagtgcgtgaggaggctgcgaatgta 465 |||||| ||||||||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct: 451 aaacttttgcgtgctaatggaattacgctgctcaaagtgcgcgaggaggcagcaaatgtg 510 Query: 466 cttgggaagtcagaaatgttttatttcagtcctatgcatccaccattgacagaagctgca 525 |||||||| ||||||||||| || || ||||||||||| ||||||||||| ||||||||| Sbjct: 511 cttgggaaatcagaaatgttctactttagtcctatgcacccaccattgactgaagctgca 570 Query: 526 caacgagcccttgattgggctgtaaatgagaaactgaaatcaggtgaagctggagaggta 585 |||||||| |||||||||||| | ||||| ||||||||||||||||||| |||||| ||| Sbjct: 571 caacgagcgcttgattgggctatcaatgaaaaactgaaatcaggtgaagatggagaagta 630 Query: 586 acggccaatcatttgttcctggggatatggtcagataaagagtcagctggtcataagata 645 || ||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 631 accgccaatcatctgctcctggggatatggtcagataaagagtcagctggtcataaagta 690 Query: 646 ctggcttcccttggttttgatgatgagaaagccagtttgctggctaaaacggctagcgaa 705 ||||||||||||||||||||||||||| ||||| || ||||| ||||||||| | ||| Sbjct: 691 ttggcttcccttggttttgatgatgagagagccaattcactggccaaaacggctggtgaa 750 Query: 706 gaggctgcaatgagtcctagatagcaaa 733 |||||||| ||||||||||||||||||| Sbjct: 751 gaggctgctatgagtcctagatagcaaa 778 Score = 91.7 bits (46), Expect = 5e-15 Identities = 46/46 (100%) Strand = Plus / Plus Query: 21 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 66 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 99 >gb|DQ244991.1| Zea mays clone 12072 mRNA sequence Length = 943 Score = 595 bits (300), Expect = e-166 Identities = 537/616 (87%) Strand = Plus / Plus Query: 135 ccctgtcctgcccgcctccctccggaccgctgccgcggggggcccactcctcgcctcccg 194 ||||||||| |||| |||||| ||| |||||| | | || ||||||| ||||||||||| Sbjct: 120 ccctgtcctacccgtctcccttcgggccgctgtcacaggtggcccacggctcgcctcccg 179 Query: 195 ctgccggagccgccgtgtcgccgccgtcgtcgctcagcttcccactacgaatccagaggt 254 |||| || ||| |||| ||||| |||||| ||||||||||| |||||||| ||||| Sbjct: 180 tctccgggtccaccgcgtcggcgccgccgtcgcccagcttcccaccacgaatccggaggt 239 Query: 255 tgcttctggggagaagaaaatccggtggtcatcaagggcggtgcggtcatttgcgttggc 314 ||||||||||||||||| ||| | |||||||||||||| |||||||| |||||| |||| Sbjct: 240 agcttctggggagaagaagatcagatggtcatcaagggctgtgcggtcttttgcgatggc 299 Query: 315 ggagctggaggcacggaagatgaggtacccaaccacaggcactgaggggctccttatggg 374 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 300 agagctggaggcccggaagatgaggtaccctaccacaggcaccgaggggctcctcatggg 359 Query: 375 catcctcgtcgagggaactagcgacgcagcaaaacttatgcgtgctaatggaattacgct 434 ||| || || || |||||||| | ||||||||||||| ||||||||||||||| || || Sbjct: 360 cattcttgttgaaggaactagtggcgcagcaaaacttttgcgtgctaatggaaccacact 419 Query: 435 gctcacagtgcgtgaggaggctgcgaatgtacttgggaagtcagaaatgttttatttcag 494 |||| ||||||||||||||| |||||||| |||||||| |||||||||||||| || || Sbjct: 420 tctcaaagtgcgtgaggaggcagcgaatgttcttgggaaatcagaaatgttttactttag 479 Query: 495 tcctatgcatccaccattgacagaagctgcacaacgagcccttgattgggctgtaaatga 554 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 480 tcccatgcatccaccattgacagaagctgcacaacgagcccttgattgggctgtcaatga 539 Query: 555 gaaactgaaatcaggtgaagctggagaggtaacggccaatcatttgttcctggggatatg 614 ||| ||||||||||||| | |||||| ||||| |||||||||||| | ||||||||||| Sbjct: 540 aaaattgaaatcaggtgaggatggagaagtaaccgccaatcatttgctactggggatatg 599 Query: 615 gtcagataaagagtcagctggtcataagatactggcttcccttggttttgatgatgagaa 674 ||||||||||||||| ||||||||||| || ||| ||| ||||| ||||| |||||||| Sbjct: 600 gtcagataaagagtcggctggtcataaaatcctgtattcgcttggatttgacgatgagaa 659 Query: 675 agccagtttgctggctaaaacggctagcgaagaggctgcaatgagtcctagatagcaaag 734 ||||||||| ||||| ||||||||| | ||||||||||||||||||| |||| ||||| | Sbjct: 660 agccagtttactggccaaaacggctggtgaagaggctgcaatgagtcttagagagcaagg 719 Query: 735 cgagcaactagtttat 750 ||||| ||| ||||| Sbjct: 720 agagcacctaatttat 735 >gb|AY105486.1| Zea mays PCO104538 mRNA sequence Length = 1046 Score = 559 bits (282), Expect = e-156 Identities = 525/606 (86%) Strand = Plus / Plus Query: 135 ccctgtcctgcccgcctccctccggaccgctgccgcggggggcccactcctcgcctcccg 194 ||||||||| |||| |||||| ||| |||||| | | || ||||||| ||||||||||| Sbjct: 125 ccctgtcctacccgtctcccttcgggccgctgtcacaggtggcccacggctcgcctcccg 184 Query: 195 ctgccggagccgccgtgtcgccgccgtcgtcgctcagcttcccactacgaatccagaggt 254 |||| |||||| |||| |||| |||||| ||||| ||||| ||| |||||||||| Sbjct: 185 tctccgggtccgccgcgtcggtgccgccgtcgcccagctccccaccacgcatccagaggt 244 Query: 255 tgcttctggggagaagaaaatccggtggtcatcaagggcggtgcggtcatttgcgttggc 314 | ||||||||||||||| ||| | |||||||||||||| |||||||| |||||| |||| Sbjct: 245 agtttctggggagaagaagatcagatggtcatcaagggctgtgcggtcttttgcgatggc 304 Query: 315 ggagctggaggcacggaagatgaggtacccaaccacaggcactgaggggctccttatggg 374 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 305 agagctggaggcccggaagatgaggtaccctaccacaggcaccgaggggctcctcatggg 364 Query: 375 catcctcgtcgagggaactagcgacgcagcaaaacttatgcgtgctaatggaattacgct 434 ||| || || || |||||||| | ||||||||||||| ||||||||||||||| || || Sbjct: 365 cattcttgttgaaggaactagtggcgcagcaaaacttttgcgtgctaatggaaccacact 424 Query: 435 gctcacagtgcgtgaggaggctgcgaatgtacttgggaagtcagaaatgttttatttcag 494 |||| ||||||||||||||| |||||||| |||||||| |||||||||||||| || || Sbjct: 425 tctcaaagtgcgtgaggaggcagcgaatgtgcttgggaaatcagaaatgttttactttag 484 Query: 495 tcctatgcatccaccattgacagaagctgcacaacgagcccttgattgggctgtaaatga 554 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 485 tcccatgcatccaccattgacagaagctgcacaacgagcccttgattgggctgtcaatga 544 Query: 555 gaaactgaaatcaggtgaagctggagaggtaacggccaatcatttgttcctggggatatg 614 ||| ||||||||||||| | |||||| ||||| |||||||||||| | ||||||||||| Sbjct: 545 aaaattgaaatcaggtgaggatggagaagtaaccgccaatcatttgctactggggatatg 604 Query: 615 gtcagataaagagtcagctggtcataagatactggcttcccttggttttgatgatgagaa 674 ||||||| | ||||| ||||||||||| || ||| ||| || || ||||| |||| ||| Sbjct: 605 gtcagatgacgagtcggctggtcataaaatcctgtattcgctcggatttgacgatgtgaa 664 Query: 675 agccagtttgctggctaaaacggctagcgaagaggctgcaatgagtcctagatagcaaag 734 ||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 665 agccagtttactggccaaaacggctgacgaggaggctgcaatgagtcctagatagcaaag 724 Query: 735 cgagca 740 ||||| Sbjct: 725 ggagca 730 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 220 bits (111), Expect = 8e-54 Identities = 165/183 (90%) Strand = Plus / Minus Query: 388 ggaactagcgacgcagcaaaacttatgcgtgctaatggaattacgctgctcacagtgcgt 447 |||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 7745556 ggaactagtgatgcagcaaaacttttgcgtgctaatggaattacgctgctcaaagtgcgc 7745497 Query: 448 gaggaggctgcgaatgtacttgggaagtcagaaatgttttatttcagtcctatgcatcca 507 |||||||| || ||||| |||||||| ||||||||||| || || ||||||||||| ||| Sbjct: 7745496 gaggaggcagcaaatgtgcttgggaaatcagaaatgttctactttagtcctatgcaccca 7745437 Query: 508 ccattgacagaagctgcacaacgagcccttgattgggctgtaaatgagaaactgaaatca 567 |||||||| ||||||||||||||||| |||||||||||| | ||||| |||||||||||| Sbjct: 7745436 ccattgactgaagctgcacaacgagcgcttgattgggctatcaatgaaaaactgaaatca 7745377 Query: 568 ggt 570 ||| Sbjct: 7745376 ggt 7745374 Score = 157 bits (79), Expect = 1e-34 Identities = 118/131 (90%) Strand = Plus / Minus Query: 567 aggtgaagctggagaggtaacggccaatcatttgttcctggggatatggtcagataaaga 626 |||||||| |||||| ||||| ||||||||| || ||||||||||||||||||||||||| Sbjct: 7741870 aggtgaagatggagaagtaaccgccaatcatctgctcctggggatatggtcagataaaga 7741811 Query: 627 gtcagctggtcataagatactggcttcccttggttttgatgatgagaaagccagtttgct 686 ||||||||||||||| || ||||||||||||||||||||||||||| ||||| || || Sbjct: 7741810 gtcagctggtcataaagtattggcttcccttggttttgatgatgagagagccaattcact 7741751 Query: 687 ggctaaaacgg 697 ||| ||||||| Sbjct: 7741750 ggccaaaacgg 7741740 Score = 135 bits (68), Expect = 4e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 278 ggtggtcatcaagggcggtgcggtcatttgcgttggcggagctggaggcacggaagatga 337 ||||||||||| | |||||| |||||||||| |||||||||||||||| |||||||||| Sbjct: 7746711 ggtggtcatcacgagcggtgaggtcatttgcaatggcggagctggaggctcggaagatga 7746652 Query: 338 ggtacccaaccacaggcactgaggggctccttatgggcatcctcgtcgaggg 389 ||||||||||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct: 7746651 ggtacccaaccactggcactgaaggactcctcatgggcatccttgtcgaggg 7746600 Score = 107 bits (54), Expect = 9e-20 Identities = 116/134 (86%), Gaps = 2/134 (1%) Strand = Plus / Minus Query: 107 cctcctcctccctctccttcctggcaacccctgtcctgcccgcctccctccggaccgctg 166 |||| |||||| |||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 7747147 cctcatcctccgtctccttcctggcagcccgtgtgctgcccgcctccctcagggccgctg 7747088 Query: 167 ccgcggggggccc-actcctcgcctcccgctgccggagccgccgtgtcgccgccgtcgtc 225 |||||||| ||| ||| | ||||||||||| |||| |||| ||||||| ||||||||| Sbjct: 7747087 ccgcggggtccccaacttc-cgcctcccgctcccggggccgaggtgtcgcggccgtcgtc 7747029 Query: 226 gctcagcttcccac 239 |||||||| ||||| Sbjct: 7747028 gctcagctccccac 7747015 Score = 91.7 bits (46), Expect = 5e-15 Identities = 46/46 (100%) Strand = Plus / Minus Query: 21 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 66 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7747245 cccccgaaaacctccgcccgccatggcgaccgccgcccaggccgcc 7747200