BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem109n06 (973 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055356.1| Oryza sativa (japonica cultivar-group) Os03g... 204 5e-49 gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 204 5e-49 gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome... 204 5e-49 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 204 5e-49 dbj|AK071921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 5e-49 >ref|NM_001055356.1| Oryza sativa (japonica cultivar-group) Os03g0125900 (Os03g0125900) mRNA, complete cds Length = 1016 Score = 204 bits (103), Expect = 5e-49 Identities = 170/194 (87%), Gaps = 15/194 (7%) Strand = Plus / Plus Query: 335 cggcgcggtcggcgtccggcaggcaggcggagcagcagc---------cggcggcggcgg 385 |||||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 465 cggcgcggacggcgtccggcaggcagtcggagcagcagcagcaggcggcggcggcggcgg 524 Query: 386 ggaggccggagagctgggggtccgcgaggcggtgggacagcggg------agcagcttcc 439 ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| Sbjct: 525 ggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcggcagcagcttcc 584 Query: 440 gcagcagcagcgacggtgtcctgctcaacttctacatgccccgctccctcacccgcagct 499 |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 585 gcagcagcagcgacggcgtcctgctcaacttctacatgccacgctccttcacccgcagct 644 Query: 500 tcaccgcgccgcgc 513 |||||||||||||| Sbjct: 645 tcaccgcgccgcgc 658 Score = 192 bits (97), Expect = 2e-45 Identities = 144/159 (90%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 110 tgtgggtccccgggatgagcccgcagacagtggacg---ggagatcatcgagggcgcagg 166 ||||||| |||||||||||||||||| | ||||||| || || |||||||||||| Sbjct: 249 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 308 Query: 167 agatcgcgcggaagcgggaggagctgctcgggatgctgcacgacctccccgagtccgagt 226 |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 309 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 368 Query: 227 acgagctctcgctcaccgacctcgtcgagaaggccggcg 265 |||||||||||||||| |||||||||||||||||||||| Sbjct: 369 acgagctctcgctcacggacctcgtcgagaaggccggcg 407 Score = 139 bits (70), Expect = 2e-29 Identities = 115/130 (88%) Strand = Plus / Plus Query: 524 cgccgtcggtctccagcggccggaccgccagcgtcacctccgactgcaacaagagggaga 583 |||||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| Sbjct: 678 cgccgtcggtctccggcggccggaccgccagtgtctgctccgatcgcaacaagagggaga 737 Query: 584 gcgacggcgataccgtgaagtgctggtcgcggctgtgggatcggcggtgtcggaagtcga 643 | || ||||| |||||| ||||||||||| |||||||||||||||||| || ||||||| Sbjct: 738 gagatggcgagaccgtgcggtgctggtcgctgctgtgggatcggcggtggcgcaagtcga 797 Query: 644 gccggcgaga 653 ||||| |||| Sbjct: 798 gccggggaga 807 >gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 204 bits (103), Expect = 5e-49 Identities = 170/194 (87%), Gaps = 15/194 (7%) Strand = Plus / Plus Query: 335 cggcgcggtcggcgtccggcaggcaggcggagcagcagc---------cggcggcggcgg 385 |||||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 125864 cggcgcggacggcgtccggcaggcagtcggagcagcagcagcaggcggcggcggcggcgg 125923 Query: 386 ggaggccggagagctgggggtccgcgaggcggtgggacagcggg------agcagcttcc 439 ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| Sbjct: 125924 ggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcggcagcagcttcc 125983 Query: 440 gcagcagcagcgacggtgtcctgctcaacttctacatgccccgctccctcacccgcagct 499 |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 125984 gcagcagcagcgacggcgtcctgctcaacttctacatgccacgctccttcacccgcagct 126043 Query: 500 tcaccgcgccgcgc 513 |||||||||||||| Sbjct: 126044 tcaccgcgccgcgc 126057 Score = 192 bits (97), Expect = 2e-45 Identities = 144/159 (90%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 110 tgtgggtccccgggatgagcccgcagacagtggacg---ggagatcatcgagggcgcagg 166 ||||||| |||||||||||||||||| | ||||||| || || |||||||||||| Sbjct: 125648 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 125707 Query: 167 agatcgcgcggaagcgggaggagctgctcgggatgctgcacgacctccccgagtccgagt 226 |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 125708 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 125767 Query: 227 acgagctctcgctcaccgacctcgtcgagaaggccggcg 265 |||||||||||||||| |||||||||||||||||||||| Sbjct: 125768 acgagctctcgctcacggacctcgtcgagaaggccggcg 125806 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 577 agggagagcgacggcgataccgtgaagtgctggtcgcggctgtgggatcggcggtgtcgg 636 |||||||| || ||||| |||||| ||||||||||| |||||||||||||||||| || Sbjct: 126830 agggagagagatggcgagaccgtgcggtgctggtcgctgctgtgggatcggcggtggcgc 126889 Query: 637 aagtcgagccggcgaga 653 |||||||||||| |||| Sbjct: 126890 aagtcgagccggggaga 126906 >gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07, complete sequence Length = 117612 Score = 204 bits (103), Expect = 5e-49 Identities = 170/194 (87%), Gaps = 15/194 (7%) Strand = Plus / Plus Query: 335 cggcgcggtcggcgtccggcaggcaggcggagcagcagc---------cggcggcggcgg 385 |||||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 1534 cggcgcggacggcgtccggcaggcagtcggagcagcagcagcaggcggcggcggcggcgg 1593 Query: 386 ggaggccggagagctgggggtccgcgaggcggtgggacagcggg------agcagcttcc 439 ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| Sbjct: 1594 ggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcggcagcagcttcc 1653 Query: 440 gcagcagcagcgacggtgtcctgctcaacttctacatgccccgctccctcacccgcagct 499 |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 1654 gcagcagcagcgacggcgtcctgctcaacttctacatgccacgctccttcacccgcagct 1713 Query: 500 tcaccgcgccgcgc 513 |||||||||||||| Sbjct: 1714 tcaccgcgccgcgc 1727 Score = 192 bits (97), Expect = 2e-45 Identities = 144/159 (90%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 110 tgtgggtccccgggatgagcccgcagacagtggacg---ggagatcatcgagggcgcagg 166 ||||||| |||||||||||||||||| | ||||||| || || |||||||||||| Sbjct: 1318 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 1377 Query: 167 agatcgcgcggaagcgggaggagctgctcgggatgctgcacgacctccccgagtccgagt 226 |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1378 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 1437 Query: 227 acgagctctcgctcaccgacctcgtcgagaaggccggcg 265 |||||||||||||||| |||||||||||||||||||||| Sbjct: 1438 acgagctctcgctcacggacctcgtcgagaaggccggcg 1476 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 577 agggagagcgacggcgataccgtgaagtgctggtcgcggctgtgggatcggcggtgtcgg 636 |||||||| || ||||| |||||| ||||||||||| |||||||||||||||||| || Sbjct: 2500 agggagagagatggcgagaccgtgcggtgctggtcgctgctgtgggatcggcggtggcgc 2559 Query: 637 aagtcgagccggcgaga 653 |||||||||||| |||| Sbjct: 2560 aagtcgagccggggaga 2576 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 204 bits (103), Expect = 5e-49 Identities = 170/194 (87%), Gaps = 15/194 (7%) Strand = Plus / Plus Query: 335 cggcgcggtcggcgtccggcaggcaggcggagcagcagc---------cggcggcggcgg 385 |||||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 1464359 cggcgcggacggcgtccggcaggcagtcggagcagcagcagcaggcggcggcggcggcgg 1464418 Query: 386 ggaggccggagagctgggggtccgcgaggcggtgggacagcggg------agcagcttcc 439 ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| Sbjct: 1464419 ggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcggcagcagcttcc 1464478 Query: 440 gcagcagcagcgacggtgtcctgctcaacttctacatgccccgctccctcacccgcagct 499 |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 1464479 gcagcagcagcgacggcgtcctgctcaacttctacatgccacgctccttcacccgcagct 1464538 Query: 500 tcaccgcgccgcgc 513 |||||||||||||| Sbjct: 1464539 tcaccgcgccgcgc 1464552 Score = 192 bits (97), Expect = 2e-45 Identities = 144/159 (90%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 110 tgtgggtccccgggatgagcccgcagacagtggacg---ggagatcatcgagggcgcagg 166 ||||||| |||||||||||||||||| | ||||||| || || |||||||||||| Sbjct: 1464143 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 1464202 Query: 167 agatcgcgcggaagcgggaggagctgctcgggatgctgcacgacctccccgagtccgagt 226 |||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 1464203 agatcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 1464262 Query: 227 acgagctctcgctcaccgacctcgtcgagaaggccggcg 265 |||||||||||||||| |||||||||||||||||||||| Sbjct: 1464263 acgagctctcgctcacggacctcgtcgagaaggccggcg 1464301 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 577 agggagagcgacggcgataccgtgaagtgctggtcgcggctgtgggatcggcggtgtcgg 636 |||||||| || ||||| |||||| ||||||||||| |||||||||||||||||| || Sbjct: 1465325 agggagagagatggcgagaccgtgcggtgctggtcgctgctgtgggatcggcggtggcgc 1465384 Query: 637 aagtcgagccggcgaga 653 |||||||||||| |||| Sbjct: 1465385 aagtcgagccggggaga 1465401 >dbj|AK071921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E05, full insert sequence Length = 1732 Score = 204 bits (103), Expect = 5e-49 Identities = 170/194 (87%), Gaps = 15/194 (7%) Strand = Plus / Plus Query: 335 cggcgcggtcggcgtccggcaggcaggcggagcagcagc---------cggcggcggcgg 385 |||||||| ||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 311 cggcgcggacggcgtccggcaggcagtcggagcagcagcagcaggcggcggcggcggcgg 370 Query: 386 ggaggccggagagctgggggtccgcgaggcggtgggacagcggg------agcagcttcc 439 ||||||||||||| ||||||| ||||||||||||||||||| | |||||||||| Sbjct: 371 ggaggccggagaggagggggtcggcgaggcggtgggacagcgcgggcggcagcagcttcc 430 Query: 440 gcagcagcagcgacggtgtcctgctcaacttctacatgccccgctccctcacccgcagct 499 |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 431 gcagcagcagcgacggcgtcctgctcaacttctacatgccacgctccttcacccgcagct 490 Query: 500 tcaccgcgccgcgc 513 |||||||||||||| Sbjct: 491 tcaccgcgccgcgc 504 Score = 184 bits (93), Expect = 4e-43 Identities = 143/159 (89%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 110 tgtgggtccccgggatgagcccgcagacagtggacg---ggagatcatcgagggcgcagg 166 ||||||| |||||||||||||||||| | ||||||| || || |||||||||||| Sbjct: 95 tgtgggtgcccgggatgagcccgcaggcggtggacgccgggctgtcggcgagggcgcagg 154 Query: 167 agatcgcgcggaagcgggaggagctgctcgggatgctgcacgacctccccgagtccgagt 226 || ||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 155 aggtcgcgcggaggcgggaggagatgctcgggatgctgcatgacctccccgagtccgagt 214 Query: 227 acgagctctcgctcaccgacctcgtcgagaaggccggcg 265 |||||||||||||||| |||||||||||||||||||||| Sbjct: 215 acgagctctcgctcacggacctcgtcgagaaggccggcg 253 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 577 agggagagcgacggcgataccgtgaagtgctggtcgcggctgtgggatcggcggtgtcgg 636 |||||||| || ||||| |||||| ||||||||||| |||||||||||||||||| || Sbjct: 1277 agggagagagatggcgagaccgtgcggtgctggtcgctgctgtgggatcggcggtggcgc 1336 Query: 637 aagtcgagccggcgaga 653 |||||||||||| |||| Sbjct: 1337 aagtcgagccggggaga 1353