BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem109d17 (1049 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066686.1| Oryza sativa (japonica cultivar-group) Os07g... 178 3e-41 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 178 3e-41 dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic D... 178 3e-41 dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic D... 178 3e-41 emb|CT831394.1| Oryza sativa (indica cultivar-group) cDNA clone:... 101 6e-18 >ref|NM_001066686.1| Oryza sativa (japonica cultivar-group) Os07g0589600 (Os07g0589600) mRNA, complete cds Length = 858 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Plus Query: 294 tgccgcggtcagagtcggtcgcgtccaccgcgggcttcggctcgcggtccgacagccgca 353 |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 224 tgccgcggtcggagtcggtggcgtccaccgtggggttcggctcgcggtccgacagccgga 283 Query: 354 gcgcgagctccagcggcagcagcagcgggtgcgtcagccgcagccactcgtcgaagagcg 413 |||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| Sbjct: 284 gcgcgagctccagcggcagcagcagcggctgcgtcagccggagcgagtcgtccaagagcg 343 Query: 414 cgtcctccgaccac 427 | |||||||||||| Sbjct: 344 cctcctccgaccac 357 Score = 117 bits (59), Expect = 9e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 439 gccgcggcgttcgctgtcgagcagcctgttctacgcgcaccctagcccgtcgccgcagct 498 ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 393 gccgcggcggtctctgtcgagcagcctgttctacgcgcacccgagcccgtcgccgcagct 452 Query: 499 gcgctc---gcggccgcgccggagcaccgggtcagcgcccccgcc 540 |||| | || ||||||||| ||||||||||| || |||||||| Sbjct: 453 gcgcacccggccgccgcgccgcagcaccgggtcggctcccccgcc 497 Score = 103 bits (52), Expect = 1e-18 Identities = 194/240 (80%), Gaps = 6/240 (2%) Strand = Plus / Plus Query: 548 tggggcatcatacgcctcggcgtcgtcggcgctccggacgtctaccctccgcgccccgcc 607 ||||||||| | |||||||||||||||||||| |||||||| |||||||| ||| || | Sbjct: 514 tggggcatcttccgcctcggcgtcgtcggcgccccggacgtgtaccctccacgctccaca 573 Query: 608 gaacccaagaacgccgc---cgcggcgagaggcgggagtggcagaagtgcaagattcgag 664 || ||||||||||||| ||| || | || ||| || |||| || ||| | |||||| Sbjct: 574 gattccaagaacgccgccgccgcagcaaaagtcggcagcagcaggagcgcacggttcgag 633 Query: 665 caggcgggcagcgccatggacaggaagcat---gtcgtggggctgttcggcgacagcctc 721 | |||| ||| |||| |||| ||||||| || ||||| || |||||||||||| || Sbjct: 634 ccggcgagcaccgccgccgacaagaagcatccggtggtgggtctcttcggcgacagcttc 693 Query: 722 ggatgcaagtgctcccctgatgtcgttgagcccgtcagcttgccggaggcggcgaagagg 781 || |||||||||||||| || || || ||||| |||| |||||||| ||||||||||||| Sbjct: 694 gggtgcaagtgctcccccgacgtggtggagccagtcaccttgccggcggcggcgaagagg 753 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 185 gccgcggcggccgacatgtgcgtggccgacgaggtcttctcccacggcaagct 237 ||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 115 gccgcggcggccgacatgtgcgtggccgacgaggtgttctcccaggggaagct 167 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 294 tgccgcggtcagagtcggtcgcgtccaccgcgggcttcggctcgcggtccgacagccgca 353 |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 23981996 tgccgcggtcggagtcggtggcgtccaccgtggggttcggctcgcggtccgacagccgga 23981937 Query: 354 gcgcgagctccagcggcagcagcagcgggtgcgtcagccgcagccactcgtcgaagagcg 413 |||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| Sbjct: 23981936 gcgcgagctccagcggcagcagcagcggctgcgtcagccggagcgagtcgtccaagagcg 23981877 Query: 414 cgtcctccgaccac 427 | |||||||||||| Sbjct: 23981876 cctcctccgaccac 23981863 Score = 117 bits (59), Expect = 9e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 439 gccgcggcgttcgctgtcgagcagcctgttctacgcgcaccctagcccgtcgccgcagct 498 ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23981827 gccgcggcggtctctgtcgagcagcctgttctacgcgcacccgagcccgtcgccgcagct 23981768 Query: 499 gcgctc---gcggccgcgccggagcaccgggtcagcgcccccgcc 540 |||| | || ||||||||| ||||||||||| || |||||||| Sbjct: 23981767 gcgcacccggccgccgcgccgcagcaccgggtcggctcccccgcc 23981723 Score = 103 bits (52), Expect = 1e-18 Identities = 194/240 (80%), Gaps = 6/240 (2%) Strand = Plus / Minus Query: 548 tggggcatcatacgcctcggcgtcgtcggcgctccggacgtctaccctccgcgccccgcc 607 ||||||||| | |||||||||||||||||||| |||||||| |||||||| ||| || | Sbjct: 23981706 tggggcatcttccgcctcggcgtcgtcggcgccccggacgtgtaccctccacgctccaca 23981647 Query: 608 gaacccaagaacgccgc---cgcggcgagaggcgggagtggcagaagtgcaagattcgag 664 || ||||||||||||| ||| || | || ||| || |||| || ||| | |||||| Sbjct: 23981646 gattccaagaacgccgccgccgcagcaaaagtcggcagcagcaggagcgcacggttcgag 23981587 Query: 665 caggcgggcagcgccatggacaggaagcat---gtcgtggggctgttcggcgacagcctc 721 | |||| ||| |||| |||| ||||||| || ||||| || |||||||||||| || Sbjct: 23981586 ccggcgagcaccgccgccgacaagaagcatccggtggtgggtctcttcggcgacagcttc 23981527 Query: 722 ggatgcaagtgctcccctgatgtcgttgagcccgtcagcttgccggaggcggcgaagagg 781 || |||||||||||||| || || || ||||| |||| |||||||| ||||||||||||| Sbjct: 23981526 gggtgcaagtgctcccccgacgtggtggagccagtcaccttgccggcggcggcgaagagg 23981467 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 185 gccgcggcggccgacatgtgcgtggccgacgaggtcttctcccacggcaagct 237 ||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 23982105 gccgcggcggccgacatgtgcgtggccgacgaggtgttctcccaggggaagct 23982053 >dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 294 tgccgcggtcagagtcggtcgcgtccaccgcgggcttcggctcgcggtccgacagccgca 353 |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 136923 tgccgcggtcggagtcggtggcgtccaccgtggggttcggctcgcggtccgacagccgga 136864 Query: 354 gcgcgagctccagcggcagcagcagcgggtgcgtcagccgcagccactcgtcgaagagcg 413 |||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| Sbjct: 136863 gcgcgagctccagcggcagcagcagcggctgcgtcagccggagcgagtcgtccaagagcg 136804 Query: 414 cgtcctccgaccac 427 | |||||||||||| Sbjct: 136803 cctcctccgaccac 136790 Score = 117 bits (59), Expect = 9e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 439 gccgcggcgttcgctgtcgagcagcctgttctacgcgcaccctagcccgtcgccgcagct 498 ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136754 gccgcggcggtctctgtcgagcagcctgttctacgcgcacccgagcccgtcgccgcagct 136695 Query: 499 gcgctc---gcggccgcgccggagcaccgggtcagcgcccccgcc 540 |||| | || ||||||||| ||||||||||| || |||||||| Sbjct: 136694 gcgcacccggccgccgcgccgcagcaccgggtcggctcccccgcc 136650 Score = 103 bits (52), Expect = 1e-18 Identities = 194/240 (80%), Gaps = 6/240 (2%) Strand = Plus / Minus Query: 548 tggggcatcatacgcctcggcgtcgtcggcgctccggacgtctaccctccgcgccccgcc 607 ||||||||| | |||||||||||||||||||| |||||||| |||||||| ||| || | Sbjct: 136633 tggggcatcttccgcctcggcgtcgtcggcgccccggacgtgtaccctccacgctccaca 136574 Query: 608 gaacccaagaacgccgc---cgcggcgagaggcgggagtggcagaagtgcaagattcgag 664 || ||||||||||||| ||| || | || ||| || |||| || ||| | |||||| Sbjct: 136573 gattccaagaacgccgccgccgcagcaaaagtcggcagcagcaggagcgcacggttcgag 136514 Query: 665 caggcgggcagcgccatggacaggaagcat---gtcgtggggctgttcggcgacagcctc 721 | |||| ||| |||| |||| ||||||| || ||||| || |||||||||||| || Sbjct: 136513 ccggcgagcaccgccgccgacaagaagcatccggtggtgggtctcttcggcgacagcttc 136454 Query: 722 ggatgcaagtgctcccctgatgtcgttgagcccgtcagcttgccggaggcggcgaagagg 781 || |||||||||||||| || || || ||||| |||| |||||||| ||||||||||||| Sbjct: 136453 gggtgcaagtgctcccccgacgtggtggagccagtcaccttgccggcggcggcgaagagg 136394 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 185 gccgcggcggccgacatgtgcgtggccgacgaggtcttctcccacggcaagct 237 ||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 137032 gccgcggcggccgacatgtgcgtggccgacgaggtgttctcccaggggaagct 136980 >dbj|AP003750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1174_G05 Length = 111202 Score = 178 bits (90), Expect = 3e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 294 tgccgcggtcagagtcggtcgcgtccaccgcgggcttcggctcgcggtccgacagccgca 353 |||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||| | Sbjct: 23604 tgccgcggtcggagtcggtggcgtccaccgtggggttcggctcgcggtccgacagccgga 23545 Query: 354 gcgcgagctccagcggcagcagcagcgggtgcgtcagccgcagccactcgtcgaagagcg 413 |||||||||||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| Sbjct: 23544 gcgcgagctccagcggcagcagcagcggctgcgtcagccggagcgagtcgtccaagagcg 23485 Query: 414 cgtcctccgaccac 427 | |||||||||||| Sbjct: 23484 cctcctccgaccac 23471 Score = 117 bits (59), Expect = 9e-23 Identities = 94/105 (89%), Gaps = 3/105 (2%) Strand = Plus / Minus Query: 439 gccgcggcgttcgctgtcgagcagcctgttctacgcgcaccctagcccgtcgccgcagct 498 ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23435 gccgcggcggtctctgtcgagcagcctgttctacgcgcacccgagcccgtcgccgcagct 23376 Query: 499 gcgctc---gcggccgcgccggagcaccgggtcagcgcccccgcc 540 |||| | || ||||||||| ||||||||||| || |||||||| Sbjct: 23375 gcgcacccggccgccgcgccgcagcaccgggtcggctcccccgcc 23331 Score = 103 bits (52), Expect = 1e-18 Identities = 194/240 (80%), Gaps = 6/240 (2%) Strand = Plus / Minus Query: 548 tggggcatcatacgcctcggcgtcgtcggcgctccggacgtctaccctccgcgccccgcc 607 ||||||||| | |||||||||||||||||||| |||||||| |||||||| ||| || | Sbjct: 23314 tggggcatcttccgcctcggcgtcgtcggcgccccggacgtgtaccctccacgctccaca 23255 Query: 608 gaacccaagaacgccgc---cgcggcgagaggcgggagtggcagaagtgcaagattcgag 664 || ||||||||||||| ||| || | || ||| || |||| || ||| | |||||| Sbjct: 23254 gattccaagaacgccgccgccgcagcaaaagtcggcagcagcaggagcgcacggttcgag 23195 Query: 665 caggcgggcagcgccatggacaggaagcat---gtcgtggggctgttcggcgacagcctc 721 | |||| ||| |||| |||| ||||||| || ||||| || |||||||||||| || Sbjct: 23194 ccggcgagcaccgccgccgacaagaagcatccggtggtgggtctcttcggcgacagcttc 23135 Query: 722 ggatgcaagtgctcccctgatgtcgttgagcccgtcagcttgccggaggcggcgaagagg 781 || |||||||||||||| || || || ||||| |||| |||||||| ||||||||||||| Sbjct: 23134 gggtgcaagtgctcccccgacgtggtggagccagtcaccttgccggcggcggcgaagagg 23075 Score = 81.8 bits (41), Expect = 5e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 185 gccgcggcggccgacatgtgcgtggccgacgaggtcttctcccacggcaagct 237 ||||||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 23713 gccgcggcggccgacatgtgcgtggccgacgaggtgttctcccaggggaagct 23661 >emb|CT831394.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112M18, full insert sequence Length = 1279 Score = 101 bits (51), Expect = 6e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 326 ggcttcggctcgcggtccgacagccgcagcgcgagctccagcggcagcagcagcgggtgc 385 |||||| ||||||| ||||||||||| ||||||||||| ||| ||||||||||| | ||| Sbjct: 428 ggcttcagctcgcgctccgacagccggagcgcgagctcgagcagcagcagcagcagctgc 487 Query: 386 gtcagccgcagccactcgtcgaagagcgcgtcctccgac 424 |||||||| ||| |||| ||||||||||||||||||| Sbjct: 488 gtcagccggagcacctcgcagaagagcgcgtcctccgac 526 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 435 cgccgccgcggcgttcgctgtcgagcagcctgttctacgcgcaccctagcccgtcgccgc 494 |||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 582 cgccgcggcggcggccgctgtcgggcagcctgttctacgcgcacccgagcccgtcgccgc 641