BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem108m13
         (969 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001049166.1| Oryza sativa (japonica cultivar-group) Os01g...   274   6e-70
gb|AY659938.1| Oryza sativa (japonica cultivar-group) RAA1 (RAA1...   274   6e-70
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   274   6e-70
dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D...   274   6e-70
dbj|AK070626.1| Oryza sativa (japonica cultivar-group) cDNA clon...   266   2e-67

>ref|NM_001049166.1| Oryza sativa (japonica cultivar-group) Os01g0257300 (Os01g0257300)
           mRNA, complete cds
          Length = 785

 Score =  274 bits (138), Expect = 6e-70
 Identities = 213/238 (89%)
 Strand = Plus / Plus

                                                                       
Query: 218 ggaaggcgctgctgcacacgccgagcgggcagacggtgacgtcgtacgcgtcgctggagg 277
           ||||||||||| ||||||||||||||||||||  |||| ||||||||||| |||||||||
Sbjct: 187 ggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggagg 246

                                                                       
Query: 278 cgaagctgacggcgctggggtgggagcgctactacgaggacccggcgctgtaccagttcc 337
           ||  |||||||||||| ||||||||||||||||||||||||||  | || | ||||||||
Sbjct: 247 cgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttcc 306

                                                                       
Query: 338 acaagcgcggctgcctcgacctcatctccctccccagggacttcgccaagttctcctccg 397
           ||||||| |||| ||||||||||||||||||||||   |||||| ||   ||||||||||
Sbjct: 307 acaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccg 366

                                                                     
Query: 398 tccacatgtacgacatcgtcatcaagaaccgagactccttccgggtcgtcgacgccta 455
           |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 367 tccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgccta 424


>gb|AY659938.1| Oryza sativa (japonica cultivar-group) RAA1 (RAA1) mRNA, complete
           cds
          Length = 729

 Score =  274 bits (138), Expect = 6e-70
 Identities = 213/238 (89%)
 Strand = Plus / Plus

                                                                       
Query: 218 ggaaggcgctgctgcacacgccgagcgggcagacggtgacgtcgtacgcgtcgctggagg 277
           ||||||||||| ||||||||||||||||||||  |||| ||||||||||| |||||||||
Sbjct: 144 ggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggagg 203

                                                                       
Query: 278 cgaagctgacggcgctggggtgggagcgctactacgaggacccggcgctgtaccagttcc 337
           ||  |||||||||||| ||||||||||||||||||||||||||  | || | ||||||||
Sbjct: 204 cgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttcc 263

                                                                       
Query: 338 acaagcgcggctgcctcgacctcatctccctccccagggacttcgccaagttctcctccg 397
           ||||||| |||| ||||||||||||||||||||||   |||||| ||   ||||||||||
Sbjct: 264 acaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccg 323

                                                                     
Query: 398 tccacatgtacgacatcgtcatcaagaaccgagactccttccgggtcgtcgacgccta 455
           |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 324 tccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgccta 381


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  274 bits (138), Expect = 6e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                           
Query: 218     ggaaggcgctgctgcacacgccgagcgggcagacggtgacgtcgtacgcgtcgctggagg 277
               ||||||||||| ||||||||||||||||||||  |||| ||||||||||| |||||||||
Sbjct: 8585755 ggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggagg 8585696

                                                                           
Query: 278     cgaagctgacggcgctggggtgggagcgctactacgaggacccggcgctgtaccagttcc 337
               ||  |||||||||||| ||||||||||||||||||||||||||  | || | ||||||||
Sbjct: 8585695 cgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttcc 8585636

                                                                           
Query: 338     acaagcgcggctgcctcgacctcatctccctccccagggacttcgccaagttctcctccg 397
               ||||||| |||| ||||||||||||||||||||||   |||||| ||   ||||||||||
Sbjct: 8585635 acaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccg 8585576

                                                                         
Query: 398     tccacatgtacgacatcgtcatcaagaaccgagactccttccgggtcgtcgacgccta 455
               |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 8585575 tccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgccta 8585518



 Score = 89.7 bits (45), Expect = 2e-14
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                            
Query: 355      gacctcatctccctccccagggacttcgccaagttctcctccgtccacatgtacgacatc 414
                ||||| ||||| || |||| ||||||| || |||||  ||||||||||||||||||||||
Sbjct: 40935019 gacctgatctcgctgcccaaggacttctcccagttcggctccgtccacatgtacgacatc 40934960

                                                     
Query: 415      gtcatcaagaaccgagactccttccgggtcgtcgacg 451
                ||| |||||||||| ||| ||||||| ||| ||||||
Sbjct: 40934959 gtcgtcaagaaccgcgacgccttccgagtcatcgacg 40934923


>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0462H08
          Length = 139152

 Score =  274 bits (138), Expect = 6e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                         
Query: 218   ggaaggcgctgctgcacacgccgagcgggcagacggtgacgtcgtacgcgtcgctggagg 277
             ||||||||||| ||||||||||||||||||||  |||| ||||||||||| |||||||||
Sbjct: 17950 ggaaggcgctggtgcacacgccgagcgggcaggtggtgtcgtcgtacgcggcgctggagg 17891

                                                                         
Query: 278   cgaagctgacggcgctggggtgggagcgctactacgaggacccggcgctgtaccagttcc 337
             ||  |||||||||||| ||||||||||||||||||||||||||  | || | ||||||||
Sbjct: 17890 cgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttcc 17831

                                                                         
Query: 338   acaagcgcggctgcctcgacctcatctccctccccagggacttcgccaagttctcctccg 397
             ||||||| |||| ||||||||||||||||||||||   |||||| ||   ||||||||||
Sbjct: 17830 acaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccg 17771

                                                                       
Query: 398   tccacatgtacgacatcgtcatcaagaaccgagactccttccgggtcgtcgacgccta 455
             |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 17770 tccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgccta 17713


>dbj|AK070626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F13, full
           insert sequence
          Length = 786

 Score =  266 bits (134), Expect = 2e-67
 Identities = 212/238 (89%)
 Strand = Plus / Plus

                                                                       
Query: 218 ggaaggcgctgctgcacacgccgagcgggcagacggtgacgtcgtacgcgtcgctggagg 277
           ||||||||||| ||||||||||| ||||||||  |||| ||||||||||| |||||||||
Sbjct: 188 ggaaggcgctggtgcacacgccgtgcgggcaggtggtgtcgtcgtacgcggcgctggagg 247

                                                                       
Query: 278 cgaagctgacggcgctggggtgggagcgctactacgaggacccggcgctgtaccagttcc 337
           ||  |||||||||||| ||||||||||||||||||||||||||  | || | ||||||||
Sbjct: 248 cgcggctgacggcgctcgggtgggagcgctactacgaggacccctccctcttccagttcc 307

                                                                       
Query: 338 acaagcgcggctgcctcgacctcatctccctccccagggacttcgccaagttctcctccg 397
           ||||||| |||| ||||||||||||||||||||||   |||||| ||   ||||||||||
Sbjct: 308 acaagcgtggctccctcgacctcatctccctccccgccgacttctccgccttctcctccg 367

                                                                     
Query: 398 tccacatgtacgacatcgtcatcaagaaccgagactccttccgggtcgtcgacgccta 455
           |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||
Sbjct: 368 tccacatgtacgacatcgtcgtcaagaaccgcgactccttccgcgtcgtcgacgccta 425