BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107o21 (1048 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835290.1| Oryza sativa (indica cultivar-group) cDNA clone:... 948 0.0 ref|NM_001057585.1| Oryza sativa (japonica cultivar-group) Os03g... 912 0.0 gb|AY104844.1| Zea mays PCO136841 mRNA sequence 547 e-152 gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 361 4e-96 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 361 4e-96 >emb|CT835290.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN089D14, full insert sequence Length = 1260 Score = 948 bits (478), Expect = 0.0 Identities = 672/734 (91%), Gaps = 7/734 (0%) Strand = Plus / Plus Query: 164 gaggaggaggaggatgctcgggttcaggccgcagatgccgtggtcggcggcaccggccga 223 |||||||| ||||||||||||||||||| |||||| ||||||||||| ||| ||| || Sbjct: 277 gaggaggaagaggatgctcgggttcaggtcgcagacgccgtggtcgggggcgggggcgga 336 Query: 224 gccgctgt---gcgacgcggcggcggccgtcgtggcggcgcggcgagggatggagacgcc 280 |||| | | ||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 337 gccgatttgcggcgacgcggcggcggccgtggtggcggcgcggaaggggatggagacgcc 396 Query: 281 gctgacggcggtggcggaggcgttcgaggagctggcgcgcgggatggaggccgacggcgg 340 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 397 gctgacggcggtggcggaggcgttcgaggagctggcccggaggatggaggccgacggcgg 456 Query: 341 ggagctccgactcgcgcccttcggcgacacctgcgcgctcgtctccgtgctcttcagctg 400 ||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 457 ggagctccgcctcgggcccttcggcgacacgtgcgcgctcgtctccgtcctcttcagctg 516 Query: 401 cctcggcatcgccttcaagttcgccgagatcgagtacgtcgccaaggtgaacgacctcat 460 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 cctcggcatggccttcaggttcgccgagatcgagtacgtcgccaaggtgaacgacctcat 576 Query: 461 cggggcagccaagtcgtacggcacgctgaacgacatcctcgacaaggacgtcgagaacga 520 ||| || || ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 577 cggagcggcgaagtcgtacggcacgctgaacgacatcctggacaaagacgtcgagaacga 636 Query: 521 ctccgtcaagaagcagggcagccactcccggaacctgcgcagggtccggctgggcctcgg 580 || ||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 637 ctgcgtcaagaagcagggcagccactcccgcaacctgcgcagggtccgcctcggcctcgg 696 Query: 581 cctcatcaaggctctcttcgaacagttcctctccaccgagg---gttcattgtatgatgc 637 ||||||||||| ||||||||| ||||||||||||||| ||| |||| |||||||||| Sbjct: 697 cctcatcaaggttctcttcgagcagttcctctccacccaggaatgttcgctgtatgatgc 756 Query: 638 tgctacgacagcttacgggcaggtttgcgcgccgtttcatagctgggcaatcaggaaggc 697 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 757 tgctacgacagcttacgggcaggtttgcgcgccgtttcacagctgggcggtcaggaaggc 816 Query: 698 tgttggtgctgggatgtacactcttccaagcagggagcagttgatagtgaggttgaacga 757 |||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||| Sbjct: 817 tgttggtgctgggatgtacactcttccaagcagggagcagctgatcgtgaggctcaacga 876 Query: 758 aactgattgctctgtgcagaaggagatgaggagatacattgatgcttctagccatattat 817 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| || Sbjct: 877 aactgattgctccgtgcagaaggagatgaggagatacatcgatgcctctagccctatcat 936 Query: 818 agaatacatcgataaccttttcctctcgaggaacattagcctagattggtg-aactgaac 876 ||| |||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||| Sbjct: 937 agactacatcgacaaccttttcctctcgaggagcattagcctagactggtgaaactgaac 996 Query: 877 tggaaatcatattt 890 |||| |||||||| Sbjct: 997 tggagttcatattt 1010 >ref|NM_001057585.1| Oryza sativa (japonica cultivar-group) Os03g0710700 (Os03g0710700) mRNA, complete cds Length = 906 Score = 912 bits (460), Expect = 0.0 Identities = 635/692 (91%), Gaps = 6/692 (0%) Strand = Plus / Plus Query: 177 atgctcgggttcaggccgcagatgccgtggtcggcggcaccggccgagccgctgt---gc 233 ||||||||||||||| |||||| ||||||||||| ||| ||| |||||| | | || Sbjct: 1 atgctcgggttcaggtcgcagacgccgtggtcgggggcgggggcggagccgatttgcggc 60 Query: 234 gacgcggcggcggccgtcgtggcggcgcggcgagggatggagacgccgctgacggcggtg 293 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 gacgcggcggcggccgtggtggcggcgcggaaggggatggagacgccgctgacggcggtg 120 Query: 294 gcggaggcgttcgaggagctggcgcgcgggatggaggccgacggcggggagctccgactc 353 ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| Sbjct: 121 gcggaggcgttcgaggagctggcccggaggatggaggccgacggcggggagctccgcctc 180 Query: 354 gcgcccttcggcgacacctgcgcgctcgtctccgtgctcttcagctgcctcggcatcgcc 413 | ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 181 gggcccttcggcgacacgtgcgcgctcgtctccgtcctcttcagctgcctcggcatggcc 240 Query: 414 ttcaagttcgccgagatcgagtacgtcgccaaggtgaacgacctcatcggggcagccaag 473 |||| ||||||||||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 241 ttcaggttcgccgagatcgagtacgtcgccaaggtgaacgacctcatcggagcggcgaag 300 Query: 474 tcgtacggcacgctgaacgacatcctcgacaaggacgtcgagaacgactccgtcaagaag 533 |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 301 tcgtacggcacgctgaacgacatcctggacaaagacgtcgagaacgactgcgtcaagaag 360 Query: 534 cagggcagccactcccggaacctgcgcagggtccggctgggcctcggcctcatcaaggct 593 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| | Sbjct: 361 cagggcagccactcccgcaacctgcgcagggtccgcctcggcctcggcctcatcaaggtt 420 Query: 594 ctcttcgaacagttcctctccaccgagg---gttcattgtatgatgctgctacgacagct 650 |||||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 421 ctcttcgagcagttcctctccacccaggaatgttcgctgtatgatgctgctacgacagct 480 Query: 651 tacgggcaggtttgcgcgccgtttcatagctgggcaatcaggaaggctgttggtgctggg 710 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 481 tacgggcaggtttgcgcgccgtttcacagctgggcggtcaggaaggctgttggtgctggg 540 Query: 711 atgtacactcttccaagcagggagcagttgatagtgaggttgaacgaaactgattgctct 770 ||||||||||||||||||||||||||| |||| |||||| | ||||||||||||||||| Sbjct: 541 atgtacactcttccaagcagggagcagctgatcgtgaggctcaacgaaactgattgctcc 600 Query: 771 gtgcagaaggagatgaggagatacattgatgcttctagccatattatagaatacatcgat 830 |||||||||||||||||||||||||| ||||| ||||||| ||| ||||| |||||||| Sbjct: 601 gtgcagaaggagatgaggagatacatcgatgcctctagccctatcatagactacatcgac 660 Query: 831 aaccttttcctctcgaggaacattagcctaga 862 ||||||||||||||||||| |||||||||||| Sbjct: 661 aaccttttcctctcgaggagcattagcctaga 692 >gb|AY104844.1| Zea mays PCO136841 mRNA sequence Length = 685 Score = 547 bits (276), Expect = e-152 Identities = 390/428 (91%) Strand = Plus / Plus Query: 445 aggtgaacgacctcatcggggcagccaagtcgtacggcacgctgaacgacatcctcgaca 504 |||||||||| |||||||| || | |||||||||| ||||||||| |||||||||||||| Sbjct: 198 aggtgaacgatctcatcggtgccggcaagtcgtaccgcacgctgagcgacatcctcgaca 257 Query: 505 aggacgtcgagaacgactccgtcaagaagcagggcagccactcccggaacctgcgcaggg 564 ||||| || ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 258 aggacatccagaacgactgcgtgaagaagcagggaagccactcccggaacctgcgcaggg 317 Query: 565 tccggctgggcctcggcctcatcaaggctctcttcgaacagttcctctccaccgagggtt 624 |||| || || ||||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 318 tccgtctcggactcggcctcatcaaggccctcttcgagcaattcctcgccaccgagggtt 377 Query: 625 cattgtatgatgctgctacgacagcttacgggcaggtttgcgcgccgtttcatagctggg 684 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 378 cattgtatgatgctgctacgatagcttacgggcaggtctgcgcgccgtttcatagctggg 437 Query: 685 caatcaggaaggctgttggtgctgggatgtacactcttccaagcagggagcagttgatag 744 | ||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||| ||| Sbjct: 438 cgatcaggaaggctgttggcgctggcatgtacacccttccaaccagggagcagttggtag 497 Query: 745 tgaggttgaacgaaactgattgctctgtgcagaaggagatgaggagatacattgatgctt 804 || || |||||||||||||| ||| ||||||||| ||||||||||||||||||| |||| Sbjct: 498 tgcggctgaacgaaactgatctctcggtgcagaagcagatgaggagatacattgacgctt 557 Query: 805 ctagccatattatagaatacatcgataaccttttcctctcgaggaacattagcctagatt 864 |||| | ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 558 ctagtcctatcatagagtacatcgataaccttttcctctcgaggaacattagtctagatt 617 Query: 865 ggtgaact 872 |||||||| Sbjct: 618 ggtgaact 625 >gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 361 bits (182), Expect = 4e-96 Identities = 262/288 (90%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 164 gaggaggaggaggatgctcgggttcaggccgcagatgccgtggtcggcggcaccggccga 223 |||||||| ||||||||||||||||||| |||||| ||||||||||| ||| ||| || Sbjct: 50814 gaggaggaagaggatgctcgggttcaggtcgcagacgccgtggtcgggggcgggggcgga 50873 Query: 224 gccgctgt---gcgacgcggcggcggccgtcgtggcggcgcggcgagggatggagacgcc 280 |||| | | ||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 50874 gccgatttgcggcgacgcggcggcggccgtggtggcggcgcggaaggggatggagacgcc 50933 Query: 281 gctgacggcggtggcggaggcgttcgaggagctggcgcgcgggatggaggccgacggcgg 340 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 50934 gctgacggcggtggcggaggcgttcgaggagctggcccggaggatggaggccgacggcgg 50993 Query: 341 ggagctccgactcgcgcccttcggcgacacctgcgcgctcgtctccgtgctcttcagctg 400 ||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 50994 ggagctccgcctcgggcccttcggcgacacgtgcgcgctcgtctccgtcctcttcagctg 51053 Query: 401 cctcggcatcgccttcaagttcgccgagatcgagtacgtcgccaaggt 448 ||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 51054 cctcggcatggccttcaggttcgccgagatcgagtacgtcgccaaggt 51101 Score = 256 bits (129), Expect = 2e-64 Identities = 162/173 (93%) Strand = Plus / Plus Query: 445 aggtgaacgacctcatcggggcagccaagtcgtacggcacgctgaacgacatcctcgaca 504 ||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||| Sbjct: 51563 aggtgaacgacctcatcggagcggcgaagtcgtacggcacgctgaacgacatcctggaca 51622 Query: 505 aggacgtcgagaacgactccgtcaagaagcagggcagccactcccggaacctgcgcaggg 564 | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51623 aagacgtcgagaacgactgcgtcaagaagcagggcagccactcccgcaacctgcgcaggg 51682 Query: 565 tccggctgggcctcggcctcatcaaggctctcttcgaacagttcctctccacc 617 |||| || ||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 51683 tccgcctcggcctcggcctcatcaaggttctcttcgagcagttcctctccacc 51735 Score = 212 bits (107), Expect = 2e-51 Identities = 128/135 (94%) Strand = Plus / Plus Query: 628 tgtatgatgctgctacgacagcttacgggcaggtttgcgcgccgtttcatagctgggcaa 687 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52097 tgtatgatgctgctacgacagcttacgggcaggtttgcgcgccgtttcacagctgggcgg 52156 Query: 688 tcaggaaggctgttggtgctgggatgtacactcttccaagcagggagcagttgatagtga 747 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 52157 tcaggaaggctgttggtgctgggatgtacactcttccaagcagggagcagctgatcgtga 52216 Query: 748 ggttgaacgaaactg 762 || | |||||||||| Sbjct: 52217 ggctcaacgaaactg 52231 Score = 155 bits (78), Expect = 4e-34 Identities = 118/130 (90%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 762 gattgctctgtgcagaaggagatgaggagatacattgatgcttctagccatattatagaa 821 |||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||| Sbjct: 52352 gattgctccgtgcagaaggagatgaggagatacatcgatgcctctagccctatcatagac 52411 Query: 822 tacatcgataaccttttcctctcgaggaacattagcctagattggtg-aactgaactgga 880 |||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||| Sbjct: 52412 tacatcgacaaccttttcctctcgaggagcattagcctagactggtgaaactgaactgga 52471 Query: 881 aatcatattt 890 |||||||| Sbjct: 52472 gttcatattt 52481 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 361 bits (182), Expect = 4e-96 Identities = 262/288 (90%), Gaps = 3/288 (1%) Strand = Plus / Minus Query: 164 gaggaggaggaggatgctcgggttcaggccgcagatgccgtggtcggcggcaccggccga 223 |||||||| ||||||||||||||||||| |||||| ||||||||||| ||| ||| || Sbjct: 28453552 gaggaggaagaggatgctcgggttcaggtcgcagacgccgtggtcgggggcgggggcgga 28453493 Query: 224 gccgctgt---gcgacgcggcggcggccgtcgtggcggcgcggcgagggatggagacgcc 280 |||| | | ||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 28453492 gccgatttgcggcgacgcggcggcggccgtggtggcggcgcggaaggggatggagacgcc 28453433 Query: 281 gctgacggcggtggcggaggcgttcgaggagctggcgcgcgggatggaggccgacggcgg 340 |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 28453432 gctgacggcggtggcggaggcgttcgaggagctggcccggaggatggaggccgacggcgg 28453373 Query: 341 ggagctccgactcgcgcccttcggcgacacctgcgcgctcgtctccgtgctcttcagctg 400 ||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 28453372 ggagctccgcctcgggcccttcggcgacacgtgcgcgctcgtctccgtcctcttcagctg 28453313 Query: 401 cctcggcatcgccttcaagttcgccgagatcgagtacgtcgccaaggt 448 ||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 28453312 cctcggcatggccttcaggttcgccgagatcgagtacgtcgccaaggt 28453265 Score = 256 bits (129), Expect = 2e-64 Identities = 162/173 (93%) Strand = Plus / Minus Query: 445 aggtgaacgacctcatcggggcagccaagtcgtacggcacgctgaacgacatcctcgaca 504 ||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||| Sbjct: 28452803 aggtgaacgacctcatcggagcggcgaagtcgtacggcacgctgaacgacatcctggaca 28452744 Query: 505 aggacgtcgagaacgactccgtcaagaagcagggcagccactcccggaacctgcgcaggg 564 | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28452743 aagacgtcgagaacgactgcgtcaagaagcagggcagccactcccgcaacctgcgcaggg 28452684 Query: 565 tccggctgggcctcggcctcatcaaggctctcttcgaacagttcctctccacc 617 |||| || ||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 28452683 tccgcctcggcctcggcctcatcaaggttctcttcgagcagttcctctccacc 28452631 Score = 212 bits (107), Expect = 2e-51 Identities = 128/135 (94%) Strand = Plus / Minus Query: 628 tgtatgatgctgctacgacagcttacgggcaggtttgcgcgccgtttcatagctgggcaa 687 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28452269 tgtatgatgctgctacgacagcttacgggcaggtttgcgcgccgtttcacagctgggcgg 28452210 Query: 688 tcaggaaggctgttggtgctgggatgtacactcttccaagcagggagcagttgatagtga 747 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 28452209 tcaggaaggctgttggtgctgggatgtacactcttccaagcagggagcagctgatcgtga 28452150 Query: 748 ggttgaacgaaactg 762 || | |||||||||| Sbjct: 28452149 ggctcaacgaaactg 28452135 Score = 155 bits (78), Expect = 4e-34 Identities = 118/130 (90%), Gaps = 1/130 (0%) Strand = Plus / Minus Query: 762 gattgctctgtgcagaaggagatgaggagatacattgatgcttctagccatattatagaa 821 |||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||| Sbjct: 28452014 gattgctccgtgcagaaggagatgaggagatacatcgatgcctctagccctatcatagac 28451955 Query: 822 tacatcgataaccttttcctctcgaggaacattagcctagattggtg-aactgaactgga 880 |||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||| Sbjct: 28451954 tacatcgacaaccttttcctctcgaggagcattagcctagactggtgaaactgaactgga 28451895 Query: 881 aatcatattt 890 |||||||| Sbjct: 28451894 gttcatattt 28451885 Score = 103 bits (52), Expect = 1e-18 Identities = 64/68 (94%) Strand = Plus / Minus Query: 380 cgtctccgtgctcttcagctgcctcggcatcgccttcaagttcgccgagatcgagtacgt 439 ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||| Sbjct: 32370884 cgtctccgtcctcttcggctgcctcggcatcgccttcaagttcgccgagatggactacgt 32370825 Query: 440 cgccaagg 447 |||||||| Sbjct: 32370824 cgccaagg 32370817