BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107k08 (1094 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049289.1| Oryza sativa (japonica cultivar-group) Os01g... 617 e-173 dbj|AK103139.1| Oryza sativa (japonica cultivar-group) cDNA clon... 617 e-173 emb|CT830849.1| Oryza sativa (indica cultivar-group) cDNA clone:... 609 e-170 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 180 8e-42 dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 180 8e-42 >ref|NM_001049289.1| Oryza sativa (japonica cultivar-group) Os01g0280500 (Os01g0280500) mRNA, complete cds Length = 1161 Score = 617 bits (311), Expect = e-173 Identities = 587/679 (86%) Strand = Plus / Plus Query: 115 atggcgtcccgtgtcaggtttgagaactcgtgcgaggttggggtcttcgcgaggctcacc 174 ||||||||||| |||||||||||||| || ||||| |||| || ||||||||||||||| Sbjct: 134 atggcgtcccgcgtcaggtttgagaattccagcgagattggagtgttcgcgaggctcacc 193 Query: 175 aacgcctactgcttggtcccggccggtggttcagagaatttcttcagcgtgtttgaaacc 234 |||||||||||| || |||| | ||| || ||||||| |||||||||||||| ||| || Sbjct: 194 aacgcctactgcgtgctccccgacggcggagcagagaacttcttcagcgtgttcgaatcc 253 Query: 235 gagctcgccggcgtcgtcccggtggtcaggacctccatcggcgacacgaggatcgtcggg 294 |||||||||| |||||| |||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 254 gagctcgccgacgtcgtgccggtggtcaggacgtccatcggcggcacgaggatcatcggg 313 Query: 295 agattgtgcgttggtaacaataaagggctgcttctgccgcataccaccaccgaccaagag 354 || ||||||| || ||||| || || || || ||||||||||||||||| ||||||||| Sbjct: 314 aggatgtgcgtcggcaacaagaacggcctcctcctgccgcataccaccacagaccaagag 373 Query: 355 ctccagcatctgaagaacagcctgcctgaccaggtggtcatccagcgcgtcgacgagcgc 414 ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||||| Sbjct: 374 ctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgaggagcgc 433 Query: 415 ctttctgccttgggcaactgcattgcttgcaataaccatgttgctctcacacacccagat 474 || || ||| ||||||| ||| |||| ||||| ||||||| || |||||||||||||| Sbjct: 434 ctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacacccagac 493 Query: 475 ctcagcaaggaaaccgaagatctcatctcagatgttcttggagtggaggtattcaggcaa 534 || | ||| |||||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 494 ctggaccagggaaccgaggagatcatctcagatgttcttggtgtggaggtgttcaggcaa 553 Query: 535 acgattgcagggaacatcctggttgggagttactgcgccttctcaaacaaagggggactt 594 || |||||||| ||||||||||| ||||||| ||||||||| || || |||||||| ||| Sbjct: 554 accattgcaggaaacatcctggtggggagtttctgcgccttttccaataaagggggcctt 613 Query: 595 gttcacccgcacacgtcggtcgaggatctggacgagctgtcgacgctgctgcaagtgccc 654 ||||||||||| |||||||| ||||| | || |||||||||||||||||| | ||||| Sbjct: 614 gttcacccgcagacgtcggtggaggaccaggcggagctgtcgacgctgctggaggtgcca 673 Query: 655 ctcgtcgccggcaccgtcaaccgggggagcgaggtcgtcgccgcgggcatggcggtcaac 714 || | |||||| || |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct: 674 ctggccgccgggtccatcaaccggggcagcgaggtggtggccgccggcatggcggtgaac 733 Query: 715 gactggacggcgttctgcggctcggacaccacggcgaccgagctgtcggtgttggagagc 774 |||||| |||||||||||||| | ||||| |||||||| |||||||| ||| |||||||| Sbjct: 734 gactgggcggcgttctgcggcgccgacacgacggcgacggagctgtccgtggtggagagc 793 Query: 775 gtgttcaggctgagggacg 793 |||||| |||||||||||| Sbjct: 794 gtgttccggctgagggacg 812 >dbj|AK103139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G02, full insert sequence Length = 1162 Score = 617 bits (311), Expect = e-173 Identities = 587/679 (86%) Strand = Plus / Plus Query: 115 atggcgtcccgtgtcaggtttgagaactcgtgcgaggttggggtcttcgcgaggctcacc 174 ||||||||||| |||||||||||||| || ||||| |||| || ||||||||||||||| Sbjct: 135 atggcgtcccgcgtcaggtttgagaattccagcgagattggagtgttcgcgaggctcacc 194 Query: 175 aacgcctactgcttggtcccggccggtggttcagagaatttcttcagcgtgtttgaaacc 234 |||||||||||| || |||| | ||| || ||||||| |||||||||||||| ||| || Sbjct: 195 aacgcctactgcgtgctccccgacggcggagcagagaacttcttcagcgtgttcgaatcc 254 Query: 235 gagctcgccggcgtcgtcccggtggtcaggacctccatcggcgacacgaggatcgtcggg 294 |||||||||| |||||| |||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 255 gagctcgccgacgtcgtgccggtggtcaggacgtccatcggcggcacgaggatcatcggg 314 Query: 295 agattgtgcgttggtaacaataaagggctgcttctgccgcataccaccaccgaccaagag 354 || ||||||| || ||||| || || || || ||||||||||||||||| ||||||||| Sbjct: 315 aggatgtgcgtcggcaacaagaacggcctcctcctgccgcataccaccacagaccaagag 374 Query: 355 ctccagcatctgaagaacagcctgcctgaccaggtggtcatccagcgcgtcgacgagcgc 414 ||||||||||||||||||||||||||||| ||||||||| |||||||| |||| |||||| Sbjct: 375 ctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgaggagcgc 434 Query: 415 ctttctgccttgggcaactgcattgcttgcaataaccatgttgctctcacacacccagat 474 || || ||| ||||||| ||| |||| ||||| ||||||| || |||||||||||||| Sbjct: 435 ctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacacccagac 494 Query: 475 ctcagcaaggaaaccgaagatctcatctcagatgttcttggagtggaggtattcaggcaa 534 || | ||| |||||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 495 ctggaccagggaaccgaggagatcatctcagatgttcttggtgtggaggtgttcaggcaa 554 Query: 535 acgattgcagggaacatcctggttgggagttactgcgccttctcaaacaaagggggactt 594 || |||||||| ||||||||||| ||||||| ||||||||| || || |||||||| ||| Sbjct: 555 accattgcaggaaacatcctggtggggagtttctgcgccttttccaataaagggggcctt 614 Query: 595 gttcacccgcacacgtcggtcgaggatctggacgagctgtcgacgctgctgcaagtgccc 654 ||||||||||| |||||||| ||||| | || |||||||||||||||||| | ||||| Sbjct: 615 gttcacccgcagacgtcggtggaggaccaggcggagctgtcgacgctgctggaggtgcca 674 Query: 655 ctcgtcgccggcaccgtcaaccgggggagcgaggtcgtcgccgcgggcatggcggtcaac 714 || | |||||| || |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct: 675 ctggccgccgggtccatcaaccggggcagcgaggtggtggccgccggcatggcggtgaac 734 Query: 715 gactggacggcgttctgcggctcggacaccacggcgaccgagctgtcggtgttggagagc 774 |||||| |||||||||||||| | ||||| |||||||| |||||||| ||| |||||||| Sbjct: 735 gactgggcggcgttctgcggcgccgacacgacggcgacggagctgtccgtggtggagagc 794 Query: 775 gtgttcaggctgagggacg 793 |||||| |||||||||||| Sbjct: 795 gtgttccggctgagggacg 813 >emb|CT830849.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104N12, full insert sequence Length = 1095 Score = 609 bits (307), Expect = e-170 Identities = 586/679 (86%) Strand = Plus / Plus Query: 115 atggcgtcccgtgtcaggtttgagaactcgtgcgaggttggggtcttcgcgaggctcacc 174 ||||||||||| |||||||||||||| || ||||| |||| || ||||||||||||||| Sbjct: 130 atggcgtcccgcgtcaggtttgagaattccagcgagattggagtgttcgcgaggctcacc 189 Query: 175 aacgcctactgcttggtcccggccggtggttcagagaatttcttcagcgtgtttgaaacc 234 |||||||||||| || |||| | ||| || ||||||| |||||||||||||| ||| || Sbjct: 190 aacgcctactgcgtgctccccgacggcggagcagagaacttcttcagcgtgttcgaatcc 249 Query: 235 gagctcgccggcgtcgtcccggtggtcaggacctccatcggcgacacgaggatcgtcggg 294 |||||||||| |||||| |||||||||||||| |||||||||| |||||||||| ||||| Sbjct: 250 gagctcgccgacgtcgtgccggtggtcaggacgtccatcggcggcacgaggatcatcggg 309 Query: 295 agattgtgcgttggtaacaataaagggctgcttctgccgcataccaccaccgaccaagag 354 || ||||||| || ||||| || || || || ||||||||||||||||| ||||||||| Sbjct: 310 aggatgtgcgtcggcaacaagaacggcctcctcctgccgcataccaccacagaccaagag 369 Query: 355 ctccagcatctgaagaacagcctgcctgaccaggtggtcatccagcgcgtcgacgagcgc 414 ||||||||||||||||||||||||||||| ||||||| | |||||||| |||| |||||| Sbjct: 370 ctccagcatctgaagaacagcctgcctgatcaggtggccgtccagcgcatcgaggagcgc 429 Query: 415 ctttctgccttgggcaactgcattgcttgcaataaccatgttgctctcacacacccagat 474 || || ||| ||||||| ||| |||| ||||| ||||||| || |||||||||||||| Sbjct: 430 ctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacacccagac 489 Query: 475 ctcagcaaggaaaccgaagatctcatctcagatgttcttggagtggaggtattcaggcaa 534 || | ||| |||||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 490 ctggaccagggaaccgaggagatcatctcagatgttcttggtgtggaggtgttcaggcaa 549 Query: 535 acgattgcagggaacatcctggttgggagttactgcgccttctcaaacaaagggggactt 594 || |||||||| ||||||||||| ||||||| ||||||||| || || |||||||| ||| Sbjct: 550 accattgcaggaaacatcctggtggggagtttctgcgccttttccaataaagggggcctt 609 Query: 595 gttcacccgcacacgtcggtcgaggatctggacgagctgtcgacgctgctgcaagtgccc 654 ||||||||||| |||||||| ||||| | || |||||||||||||||||| | ||||| Sbjct: 610 gttcacccgcagacgtcggtggaggaccaggcggagctgtcgacgctgctggaggtgcca 669 Query: 655 ctcgtcgccggcaccgtcaaccgggggagcgaggtcgtcgccgcgggcatggcggtcaac 714 || | |||||| || |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct: 670 ctggccgccgggtccatcaaccggggcagcgaggtggtagccgccggcatggcggtgaac 729 Query: 715 gactggacggcgttctgcggctcggacaccacggcgaccgagctgtcggtgttggagagc 774 |||||| |||||||||||||| | ||||| |||||||| |||||||| ||| |||||||| Sbjct: 730 gactgggcggcgttctgcggcgccgacacgacggcgacggagctgtccgtggtggagagc 789 Query: 775 gtgttcaggctgagggacg 793 |||||| |||||||||||| Sbjct: 790 gtgttccggctgagggacg 808 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Minus Query: 595 gttcacccgcacacgtcggtcgaggatctggacgagctgtcgacgctgctgcaagtgccc 654 ||||||||||| |||||||| ||||| | || |||||||||||||||||| | ||||| Sbjct: 9966708 gttcacccgcagacgtcggtggaggaccaggcggagctgtcgacgctgctggaggtgcca 9966649 Query: 655 ctcgtcgccggcaccgtcaaccgggggagcgaggtcgtcgccgcgggcatggcggtcaac 714 || | |||||| || |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct: 9966648 ctggccgccgggtccatcaaccggggcagcgaggtggtggccgccggcatggcggtgaac 9966589 Query: 715 gactggacggcgttctgcggctcggacaccacggcgaccgagctgtcggtgttggagagc 774 |||||| |||||||||||||| | ||||| |||||||| |||||||| ||| |||||||| Sbjct: 9966588 gactgggcggcgttctgcggcgccgacacgacggcgacggagctgtccgtggtggagagc 9966529 Query: 775 gtgttcaggctgagggacg 793 |||||| |||||||||||| Sbjct: 9966528 gtgttccggctgagggacg 9966510 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 351 agagctccagcatctgaagaacagcctgcctgaccaggtggtcatccagcgcgtcgacga 410 ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| || Sbjct: 9967178 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 9967119 Query: 411 gcgcctttctgccttgggcaactgcattgcttgcaataaccatgttgctctcacacaccc 470 |||||| || ||| ||||||| ||| |||| ||||| ||||||| || ||||||||||| Sbjct: 9967118 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 9967059 Query: 471 aga 473 ||| Sbjct: 9967058 aga 9967056 Score = 129 bits (65), Expect = 3e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 220 agcgtgtttgaaaccgagctcgccggcgtcgtcccggtggtcaggacctccatcggcgac 279 |||||||| ||| |||||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 9967601 agcgtgttcgaatccgagctcgccgacgtcgtgccggtggtcaggacgtccatcggcggc 9967542 Query: 280 acgaggatcgtcgggagattgtgcgttggtaacaataaagggctgcttctgccgcatacc 339 ||||||||| ||||||| ||||||| || ||||| || || || || |||||||||||| Sbjct: 9967541 acgaggatcatcgggaggatgtgcgtcggcaacaagaacggcctcctcctgccgcatacc 9967482 Query: 340 accaccgaccaag 352 ||||| ||||||| Sbjct: 9967481 accacagaccaag 9967469 Score = 119 bits (60), Expect = 2e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 497 tcatctcagatgttcttggagtggaggtattcaggcaaacgattgcagggaacatcctgg 556 ||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||| Sbjct: 9966915 tcatctcagatgttcttggtgtggaggtgttcaggcaaaccattgcaggaaacatcctgg 9966856 Query: 557 ttgggagttactgcgccttctcaaacaaagggggacttgt 596 | ||||||| ||||||||| || || |||||||| ||||| Sbjct: 9966855 tggggagtttctgcgccttttccaataaagggggccttgt 9966816 Score = 77.8 bits (39), Expect = 8e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 127 gtcaggtttgagaactcgtgcgaggttggggtcttcgcgaggctcaccaacgcctactgc 186 |||||||||||||| || ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 9967777 gtcaggtttgagaattccagcgagattggagtgttcgcgaggctcaccaacgcctactgc 9967718 Query: 187 ttggtcccggccggtggttcagagaatttcttcag 221 || |||| | ||| || ||||||| |||||||| Sbjct: 9967717 gtgctccccgacggcggagcagagaacttcttcag 9967683 >dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F09 Length = 132713 Score = 180 bits (91), Expect = 8e-42 Identities = 172/199 (86%) Strand = Plus / Minus Query: 595 gttcacccgcacacgtcggtcgaggatctggacgagctgtcgacgctgctgcaagtgccc 654 ||||||||||| |||||||| ||||| | || |||||||||||||||||| | ||||| Sbjct: 46990 gttcacccgcagacgtcggtggaggaccaggcggagctgtcgacgctgctggaggtgcca 46931 Query: 655 ctcgtcgccggcaccgtcaaccgggggagcgaggtcgtcgccgcgggcatggcggtcaac 714 || | |||||| || |||||||||| |||||||| || ||||| ||||||||||| ||| Sbjct: 46930 ctggccgccgggtccatcaaccggggcagcgaggtggtggccgccggcatggcggtgaac 46871 Query: 715 gactggacggcgttctgcggctcggacaccacggcgaccgagctgtcggtgttggagagc 774 |||||| |||||||||||||| | ||||| |||||||| |||||||| ||| |||||||| Sbjct: 46870 gactgggcggcgttctgcggcgccgacacgacggcgacggagctgtccgtggtggagagc 46811 Query: 775 gtgttcaggctgagggacg 793 |||||| |||||||||||| Sbjct: 46810 gtgttccggctgagggacg 46792 Score = 133 bits (67), Expect = 2e-27 Identities = 109/123 (88%) Strand = Plus / Minus Query: 351 agagctccagcatctgaagaacagcctgcctgaccaggtggtcatccagcgcgtcgacga 410 ||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| || Sbjct: 47460 agagctccagcatctgaagaacagcctgcctgatcaggtggtcgtccagcgcatcgagga 47401 Query: 411 gcgcctttctgccttgggcaactgcattgcttgcaataaccatgttgctctcacacaccc 470 |||||| || ||| ||||||| ||| |||| ||||| ||||||| || ||||||||||| Sbjct: 47400 gcgcctctccgccctgggcaattgcgttgcctgcaacgaccatgtcgccctcacacaccc 47341 Query: 471 aga 473 ||| Sbjct: 47340 aga 47338 Score = 129 bits (65), Expect = 3e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 220 agcgtgtttgaaaccgagctcgccggcgtcgtcccggtggtcaggacctccatcggcgac 279 |||||||| ||| |||||||||||| |||||| |||||||||||||| |||||||||| | Sbjct: 47883 agcgtgttcgaatccgagctcgccgacgtcgtgccggtggtcaggacgtccatcggcggc 47824 Query: 280 acgaggatcgtcgggagattgtgcgttggtaacaataaagggctgcttctgccgcatacc 339 ||||||||| ||||||| ||||||| || ||||| || || || || |||||||||||| Sbjct: 47823 acgaggatcatcgggaggatgtgcgtcggcaacaagaacggcctcctcctgccgcatacc 47764 Query: 340 accaccgaccaag 352 ||||| ||||||| Sbjct: 47763 accacagaccaag 47751 Score = 119 bits (60), Expect = 2e-23 Identities = 90/100 (90%) Strand = Plus / Minus Query: 497 tcatctcagatgttcttggagtggaggtattcaggcaaacgattgcagggaacatcctgg 556 ||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||| Sbjct: 47197 tcatctcagatgttcttggtgtggaggtgttcaggcaaaccattgcaggaaacatcctgg 47138 Query: 557 ttgggagttactgcgccttctcaaacaaagggggacttgt 596 | ||||||| ||||||||| || || |||||||| ||||| Sbjct: 47137 tggggagtttctgcgccttttccaataaagggggccttgt 47098 Score = 77.8 bits (39), Expect = 8e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 127 gtcaggtttgagaactcgtgcgaggttggggtcttcgcgaggctcaccaacgcctactgc 186 |||||||||||||| || ||||| |||| || ||||||||||||||||||||||||||| Sbjct: 48059 gtcaggtttgagaattccagcgagattggagtgttcgcgaggctcaccaacgcctactgc 48000 Query: 187 ttggtcccggccggtggttcagagaatttcttcag 221 || |||| | ||| || ||||||| |||||||| Sbjct: 47999 gtgctccccgacggcggagcagagaacttcttcag 47965