BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107k07 (926 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g... 502 e-138 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 496 e-137 dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic D... 496 e-137 dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 496 e-137 gb|AF291748.1|AF291748 Zea mays high mobility group I/Y-2 mRNA, ... 317 4e-83 >ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g0428800 (Os08g0428800) mRNA, complete cds Length = 1416 Score = 502 bits (253), Expect = e-138 Identities = 434/497 (87%), Gaps = 18/497 (3%) Strand = Plus / Plus Query: 93 ccgacgaagctgccaagccgccgccgctcccgccctaccccgagatgatactggcggcga 152 |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11 ccgacgaagcctccaagccgccgcctctcccgccctacccggagatgatactggcggcga 70 Query: 153 tcgaggcgctgaatgacaagaacgggtcgaacaagtcggcgatctccaagtacatcgagg 212 |||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 71 tcgaggggctgaacgagaagagcgggtcgaacaagtcggcgatctccaagttcatcgagg 130 Query: 213 acaagtacggcgatctgccgccggcgcacgcgtcgctgctgacggcgcacctggcgcgca 272 |||||||| || |||||||||||||||||||||||||| |||||||||||||| | | Sbjct: 131 ggaagtacggggacctgccgccggcgcacgcgtcgctgctcacggcgcacctggccagga 190 Query: 273 tgaaggagtccggcgagctcatcttcctcaagaacaactacttccgggccgacgcgcccg 332 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 191 tgaaggagtccggtgagctcatcttcctcaagaacaactacttccgcgccgacgcgcccg 250 Query: 333 acgcgccacccaagcgtggccgcggccgcccgcccaagcccagggaccccaacgcgccgt 392 ||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 251 acgcgccgcccaagcgcggccggggccgcccccccaagccgcgggaccccaacgcgccgc 310 Query: 393 ctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcccgcccaaggccaaggacc 452 | || ||||||||| | ||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 311 cgccgccgcccaagccctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacc 370 Query: 453 ccctcgccgaggccacctccggcacgcccaaggcccgcggccgccagcccaagaaggcca 512 || || |||| |||| | |||||| |||||||||||| |||||||||||||| Sbjct: 371 ccatctccgacgccatc---------cccaagtcccgcggccgcccgcccaagaaggcca 421 Query: 513 agaccgcccccgccc---------ccgccgccgacggctccgcctccgtcaagcgcggcc 563 |||| || ||||||| |||||| |||||||||||| ||||||||||||||| Sbjct: 422 agacggctcccgcccctcctcccgccgccggcgacggctccgctcccgtcaagcgcggcc 481 Query: 564 gcggccggccccccaag 580 |||||||||| |||||| Sbjct: 482 gcggccggccacccaag 498 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 496 bits (250), Expect = e-137 Identities = 428/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 135 agatgatactggcggcgatcgaggcgctgaatgacaagaacgggtcgaacaagtcggcga 194 |||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||| Sbjct: 20650572 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 20650513 Query: 195 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 254 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 20650512 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 20650453 Query: 255 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 314 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20650452 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 20650393 Query: 315 tccgggccgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 374 |||| |||||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 20650392 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 20650333 Query: 375 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 434 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 20650332 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 20650273 Query: 435 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 494 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 20650272 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 20650222 Query: 495 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 545 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 20650221 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 20650162 Query: 546 cctccgtcaagcgcggccgcggccggccccccaaggtacgccctgccgtgcccagcgaga 605 | ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 20650161 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 20650102 Query: 606 cggcggcggc 615 |||||||||| Sbjct: 20650101 cggcggcggc 20650092 >dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 496 bits (250), Expect = e-137 Identities = 428/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 135 agatgatactggcggcgatcgaggcgctgaatgacaagaacgggtcgaacaagtcggcga 194 |||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||| Sbjct: 124944 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 124885 Query: 195 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 254 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 124884 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 124825 Query: 255 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 314 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 124824 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 124765 Query: 315 tccgggccgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 374 |||| |||||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 124764 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 124705 Query: 375 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 434 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 124704 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 124645 Query: 435 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 494 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 124644 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 124594 Query: 495 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 545 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 124593 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 124534 Query: 546 cctccgtcaagcgcggccgcggccggccccccaaggtacgccctgccgtgcccagcgaga 605 | ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 124533 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 124474 Query: 606 cggcggcggc 615 |||||||||| Sbjct: 124473 cggcggcggc 124464 >dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 496 bits (250), Expect = e-137 Identities = 428/490 (87%), Gaps = 18/490 (3%) Strand = Plus / Minus Query: 135 agatgatactggcggcgatcgaggcgctgaatgacaagaacgggtcgaacaagtcggcga 194 |||||||||||||||||||||||| |||||| || |||| |||||||||||||||||||| Sbjct: 23025 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 22966 Query: 195 tctccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctga 254 ||||||||| |||||||| |||||||| || |||||||||||||||||||||||||| | Sbjct: 22965 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 22906 Query: 255 cggcgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactact 314 ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22905 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 22846 Query: 315 tccgggccgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagccca 374 |||| |||||||||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 22845 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagccgc 22786 Query: 375 gggaccccaacgcgccgtctcctccgcccaagtcgtcctccccgcgcccccgcggtcgcc 434 ||||||||||||||||| | || ||||||||| | ||||| |||||||||||||| |||| Sbjct: 22785 gggaccccaacgcgccgccgccgccgcccaagccctcctcgccgcgcccccgcggccgcc 22726 Query: 435 cgcccaaggccaaggaccccctcgccgaggccacctccggcacgcccaaggcccgcggcc 494 |||||||| ||||||||||| || |||| |||| | |||||| ||||||||| Sbjct: 22725 cgcccaagtccaaggaccccatctccgacgccatc---------cccaagtcccgcggcc 22675 Query: 495 gccagcccaagaaggccaagaccgcccccgccc---------ccgccgccgacggctccg 545 ||| |||||||||||||||||| || ||||||| |||||| ||||||||||| Sbjct: 22674 gcccgcccaagaaggccaagacggctcccgcccctcctcccgccgccggcgacggctccg 22615 Query: 546 cctccgtcaagcgcggccgcggccggccccccaaggtacgccctgccgtgcccagcgaga 605 | ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 22614 ctcccgtcaagcgcggccgcggccggccacccaaggtacgccccgccgtccccagcgagg 22555 Query: 606 cggcggcggc 615 |||||||||| Sbjct: 22554 cggcggcggc 22545 >gb|AF291748.1|AF291748 Zea mays high mobility group I/Y-2 mRNA, complete cds Length = 1084 Score = 317 bits (160), Expect = 4e-83 Identities = 289/332 (87%) Strand = Plus / Plus Query: 78 tcgtcgccatggccaccgacgaagctgccaagccgccgccgctcccgccctaccccgaga 137 ||||||||||||||||||||||||| |||||||| | ||| |||| ||||| ||||||| Sbjct: 83 tcgtcgccatggccaccgacgaagccaccaagccgtccccgatcccaccctatcccgaga 142 Query: 138 tgatactggcggcgatcgaggcgctgaatgacaagaacgggtcgaacaagtcggcgatct 197 |||| |||||||||||||||| || | ||||||| ||||||||||||||| || |||| Sbjct: 143 tgatcctggcggcgatcgagggtctagacgacaagagcgggtcgaacaagtccgccatct 202 Query: 198 ccaagtacatcgaggacaagtacggcgatctgccgccggcgcacgcgtcgctgctgacgg 257 ||||||||||||||| |||||||||| ||||| || |||||||||||||||||||| | Sbjct: 203 ccaagtacatcgagggcaagtacggctcgctgccccccgcgcacgcgtcgctgctgaccg 262 Query: 258 cgcacctggcgcgcatgaaggagtccggcgagctcatcttcctcaagaacaactacttcc 317 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 263 cgcacctggcgcgcatgaaggagtccggagagctcgtcttcctcaagaacaactacttcc 322 Query: 318 gggccgacgcgcccgacgcgccacccaagcgtggccgcggccgcccgcccaagcccaggg 377 | || | ||| ||||||||||| || ||||| || ||||| ||||| |||||| | ||| Sbjct: 323 gcgcgggcgcccccgacgcgccgccgaagcgcgggcgcgggcgccctcccaaggcgcggg 382 Query: 378 accccaacgcgccgtctcctccgcccaagtcg 409 |||| ||||||||| | || ||||||||||| Sbjct: 383 acccgaacgcgccggcgccggcgcccaagtcg 414 Score = 115 bits (58), Expect = 3e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 518 gcccccgcccccgccgccgacggctccgcctccgtcaagcgcggccgcggccggcccccc 577 ||||| ||||| || | |||||| ||| || ||| |||||||||||||||| |||||||| Sbjct: 571 gcccctgcccctgctggcgacgggtccacccccggcaagcgcggccgcggcaggcccccc 630 Query: 578 aaggtacgccctgccgtgcccagcgagacggcggcggcttga 619 ||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 631 aaggtacgccccgccgtgcccagcgagacggccgcggcttga 672