BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107f02 (999 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060245.1| Oryza sativa (japonica cultivar-group) Os04g... 710 0.0 dbj|AK072902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 710 0.0 emb|CR855235.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 363 9e-97 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 363 9e-97 emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 363 9e-97 >ref|NM_001060245.1| Oryza sativa (japonica cultivar-group) Os04g0591000 (Os04g0591000) mRNA, complete cds Length = 1255 Score = 710 bits (358), Expect = 0.0 Identities = 496/542 (91%) Strand = Plus / Plus Query: 223 gaggacgacgaggagcaggagggggagaagcggcggaagctgtacgtggccaacctgccc 282 ||||| || |||||| ||| ||| |||||||||||||||||||||||||||||| | ||| Sbjct: 229 gaggaggaggaggaggaggggggagagaagcggcggaagctgtacgtggccaacatcccc 288 Query: 283 tggagcttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgtcgtcaaggac 342 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 289 tggtccttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgccgtcaaggac 348 Query: 343 gtcgaggtgatcaaggggaaggatgggaggaagaaggggttcgctttcgtgacgatgtcg 402 |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| | Sbjct: 349 gtcgaggtgatcaaggggaaggatgggaagaagaaggggttcgcgttcgtcacgatggca 408 Query: 403 acggcggaggaggccgccgccgccgtggagaagctcaactcccacgatgtcatgggaaga 462 |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| Sbjct: 409 acggcggaggaggccgccgctgctgtggagaagctcaactccctcgatgtcatgggaagg 468 Query: 463 atcatcaaggtggaattttcaaagagctttagaaaacctgctccacctcctcctccgggc 522 | ||||| |||||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 469 accatcagggtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggc 528 Query: 523 accattgtagagaggcacaagctttatgtgtccaatcttccatggaaagcaagggctccc 582 || ||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 529 acaattttggagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctccc 588 Query: 583 aatatgaaggagttcttctcaaaatttaacccgctttcttctaaggtagtctttgatagc 642 |||||||||||||| |||||||||||||| || |||||| ||||||| |||||||||||| Sbjct: 589 aatatgaaggagtttttctcaaaatttaatccactttctgctaaggtggtctttgatagc 648 Query: 643 ccatcaggaaaatcagctgggtacggttttgtttcttttgggacaaaagaggaggcagag 702 |||||||||||||||||||| || ||||||||||||||||||||||||||||| || || Sbjct: 649 ccatcaggaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaa 708 Query: 703 gctgctctcagtgaactcgacggaaaggaacttatgggaagacccgttcgcttgagatgg 762 |||||||||| ||||||||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 709 gctgctctcactgaactcgatgggaaggagcttatgggaagacctgttcgtttgagatgg 768 Query: 763 cg 764 || Sbjct: 769 cg 770 >dbj|AK072902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147E13, full insert sequence Length = 1256 Score = 710 bits (358), Expect = 0.0 Identities = 496/542 (91%) Strand = Plus / Plus Query: 223 gaggacgacgaggagcaggagggggagaagcggcggaagctgtacgtggccaacctgccc 282 ||||| || |||||| ||| ||| |||||||||||||||||||||||||||||| | ||| Sbjct: 230 gaggaggaggaggaggaggggggagagaagcggcggaagctgtacgtggccaacatcccc 289 Query: 283 tggagcttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgtcgtcaaggac 342 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 290 tggtccttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgccgtcaaggac 349 Query: 343 gtcgaggtgatcaaggggaaggatgggaggaagaaggggttcgctttcgtgacgatgtcg 402 |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| | Sbjct: 350 gtcgaggtgatcaaggggaaggatgggaagaagaaggggttcgcgttcgtcacgatggca 409 Query: 403 acggcggaggaggccgccgccgccgtggagaagctcaactcccacgatgtcatgggaaga 462 |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| Sbjct: 410 acggcggaggaggccgccgctgctgtggagaagctcaactccctcgatgtcatgggaagg 469 Query: 463 atcatcaaggtggaattttcaaagagctttagaaaacctgctccacctcctcctccgggc 522 | ||||| |||||| ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 470 accatcagggtggagttttcaaagagtttcagaaaacctgctcctcctcctcctccgggc 529 Query: 523 accattgtagagaggcacaagctttatgtgtccaatcttccatggaaagcaagggctccc 582 || ||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 530 acaattttggagaggcacaaactttatgtgtccaatctcccatggaaagcaagggctccc 589 Query: 583 aatatgaaggagttcttctcaaaatttaacccgctttcttctaaggtagtctttgatagc 642 |||||||||||||| |||||||||||||| || |||||| ||||||| |||||||||||| Sbjct: 590 aatatgaaggagtttttctcaaaatttaatccactttctgctaaggtggtctttgatagc 649 Query: 643 ccatcaggaaaatcagctgggtacggttttgtttcttttgggacaaaagaggaggcagag 702 |||||||||||||||||||| || ||||||||||||||||||||||||||||| || || Sbjct: 650 ccatcaggaaaatcagctggttatggttttgtttcttttgggacaaaagaggaagccgaa 709 Query: 703 gctgctctcagtgaactcgacggaaaggaacttatgggaagacccgttcgcttgagatgg 762 |||||||||| ||||||||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 710 gctgctctcactgaactcgatgggaaggagcttatgggaagacctgttcgtttgagatgg 769 Query: 763 cg 764 || Sbjct: 770 cg 771 >emb|CR855235.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0142I02-OSIGBa0101B20, complete sequence Length = 189880 Score = 363 bits (183), Expect = 9e-97 Identities = 252/275 (91%) Strand = Plus / Minus Query: 448 gatgtcatgggaagaatcatcaaggtggaattttcaaagagctttagaaaacctgctcca 507 |||||||||||||| | ||||| |||||| ||||||||||| || |||||||||||||| Sbjct: 19756 gatgtcatgggaaggaccatcagggtggagttttcaaagagtttcagaaaacctgctcct 19697 Query: 508 cctcctcctccgggcaccattgtagagaggcacaagctttatgtgtccaatcttccatgg 567 ||||||||||||||||| ||| | ||||||||||| ||||||||||||||||| |||||| Sbjct: 19696 cctcctcctccgggcacaattttggagaggcacaaactttatgtgtccaatctcccatgg 19637 Query: 568 aaagcaagggctcccaatatgaaggagttcttctcaaaatttaacccgctttcttctaag 627 ||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||||| Sbjct: 19636 aaagcaagggctcccaatatgaaggagtttttctcaaaatttaatccactttctgctaag 19577 Query: 628 gtagtctttgatagcccatcaggaaaatcagctgggtacggttttgtttcttttgggaca 687 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 19576 gtggtctttgatagcccatcaggaaaatcagctggttatggttttgtttcttttgggaca 19517 Query: 688 aaagaggaggcagaggctgctctcagtgaactcga 722 |||||||| || || |||||||||| ||||||||| Sbjct: 19516 aaagaggaagccgaagctgctctcactgaactcga 19482 Score = 178 bits (90), Expect = 3e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 223 gaggacgacgaggagcaggagggggagaagcggcggaagctgtacgtggccaacctgccc 282 ||||| || |||||| ||| ||| |||||||||||||||||||||||||||||| | ||| Sbjct: 20918 gaggaggaggaggaggaggggggagagaagcggcggaagctgtacgtggccaacatcccc 20859 Query: 283 tggagcttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgtcgtcaaggac 342 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20858 tggtccttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgccgtcaaggac 20799 Query: 343 gtcgaggtga 352 |||||||||| Sbjct: 20798 gtcgaggtga 20789 Score = 141 bits (71), Expect = 6e-30 Identities = 92/99 (92%) Strand = Plus / Minus Query: 347 aggtgatcaaggggaaggatgggaggaagaaggggttcgctttcgtgacgatgtcgacgg 406 |||||||||||||||||||||||| ||||||||||||||| ||||| |||||| | |||| Sbjct: 20688 aggtgatcaaggggaaggatgggaagaagaaggggttcgcgttcgtcacgatggcaacgg 20629 Query: 407 cggaggaggccgccgccgccgtggagaagctcaactccc 445 |||||||||||||||| || ||||||||||||||||||| Sbjct: 20628 cggaggaggccgccgctgctgtggagaagctcaactccc 20590 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 363 bits (183), Expect = 9e-97 Identities = 252/275 (91%) Strand = Plus / Minus Query: 448 gatgtcatgggaagaatcatcaaggtggaattttcaaagagctttagaaaacctgctcca 507 |||||||||||||| | ||||| |||||| ||||||||||| || |||||||||||||| Sbjct: 29862999 gatgtcatgggaaggaccatcagggtggagttttcaaagagtttcagaaaacctgctcct 29862940 Query: 508 cctcctcctccgggcaccattgtagagaggcacaagctttatgtgtccaatcttccatgg 567 ||||||||||||||||| ||| | ||||||||||| ||||||||||||||||| |||||| Sbjct: 29862939 cctcctcctccgggcacaattttggagaggcacaaactttatgtgtccaatctcccatgg 29862880 Query: 568 aaagcaagggctcccaatatgaaggagttcttctcaaaatttaacccgctttcttctaag 627 ||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||||| Sbjct: 29862879 aaagcaagggctcccaatatgaaggagtttttctcaaaatttaatccactttctgctaag 29862820 Query: 628 gtagtctttgatagcccatcaggaaaatcagctgggtacggttttgtttcttttgggaca 687 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 29862819 gtggtctttgatagcccatcaggaaaatcagctggttatggttttgtttcttttgggaca 29862760 Query: 688 aaagaggaggcagaggctgctctcagtgaactcga 722 |||||||| || || |||||||||| ||||||||| Sbjct: 29862759 aaagaggaagccgaagctgctctcactgaactcga 29862725 Score = 178 bits (90), Expect = 3e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 223 gaggacgacgaggagcaggagggggagaagcggcggaagctgtacgtggccaacctgccc 282 ||||| || |||||| ||| ||| |||||||||||||||||||||||||||||| | ||| Sbjct: 29864162 gaggaggaggaggaggaggggggagagaagcggcggaagctgtacgtggccaacatcccc 29864103 Query: 283 tggagcttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgtcgtcaaggac 342 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 29864102 tggtccttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgccgtcaaggac 29864043 Query: 343 gtcgaggtga 352 |||||||||| Sbjct: 29864042 gtcgaggtga 29864033 Score = 141 bits (71), Expect = 6e-30 Identities = 92/99 (92%) Strand = Plus / Minus Query: 347 aggtgatcaaggggaaggatgggaggaagaaggggttcgctttcgtgacgatgtcgacgg 406 |||||||||||||||||||||||| ||||||||||||||| ||||| |||||| | |||| Sbjct: 29863931 aggtgatcaaggggaaggatgggaagaagaaggggttcgcgttcgtcacgatggcaacgg 29863872 Query: 407 cggaggaggccgccgccgccgtggagaagctcaactccc 445 |||||||||||||||| || ||||||||||||||||||| Sbjct: 29863871 cggaggaggccgccgctgctgtggagaagctcaactccc 29863833 >emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 363 bits (183), Expect = 9e-97 Identities = 252/275 (91%) Strand = Plus / Minus Query: 448 gatgtcatgggaagaatcatcaaggtggaattttcaaagagctttagaaaacctgctcca 507 |||||||||||||| | ||||| |||||| ||||||||||| || |||||||||||||| Sbjct: 143925 gatgtcatgggaaggaccatcagggtggagttttcaaagagtttcagaaaacctgctcct 143866 Query: 508 cctcctcctccgggcaccattgtagagaggcacaagctttatgtgtccaatcttccatgg 567 ||||||||||||||||| ||| | ||||||||||| ||||||||||||||||| |||||| Sbjct: 143865 cctcctcctccgggcacaattttggagaggcacaaactttatgtgtccaatctcccatgg 143806 Query: 568 aaagcaagggctcccaatatgaaggagttcttctcaaaatttaacccgctttcttctaag 627 ||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||||| Sbjct: 143805 aaagcaagggctcccaatatgaaggagtttttctcaaaatttaatccactttctgctaag 143746 Query: 628 gtagtctttgatagcccatcaggaaaatcagctgggtacggttttgtttcttttgggaca 687 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 143745 gtggtctttgatagcccatcaggaaaatcagctggttatggttttgtttcttttgggaca 143686 Query: 688 aaagaggaggcagaggctgctctcagtgaactcga 722 |||||||| || || |||||||||| ||||||||| Sbjct: 143685 aaagaggaagccgaagctgctctcactgaactcga 143651 Score = 178 bits (90), Expect = 3e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 223 gaggacgacgaggagcaggagggggagaagcggcggaagctgtacgtggccaacctgccc 282 ||||| || |||||| ||| ||| |||||||||||||||||||||||||||||| | ||| Sbjct: 145088 gaggaggaggaggaggaggggggagagaagcggcggaagctgtacgtggccaacatcccc 145029 Query: 283 tggagcttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgtcgtcaaggac 342 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145028 tggtccttccccgcgccggagatcgagaagctcttcgcgcagtgcggcgccgtcaaggac 144969 Query: 343 gtcgaggtga 352 |||||||||| Sbjct: 144968 gtcgaggtga 144959 Score = 141 bits (71), Expect = 6e-30 Identities = 92/99 (92%) Strand = Plus / Minus Query: 347 aggtgatcaaggggaaggatgggaggaagaaggggttcgctttcgtgacgatgtcgacgg 406 |||||||||||||||||||||||| ||||||||||||||| ||||| |||||| | |||| Sbjct: 144857 aggtgatcaaggggaaggatgggaagaagaaggggttcgcgttcgtcacgatggcaacgg 144798 Query: 407 cggaggaggccgccgccgccgtggagaagctcaactccc 445 |||||||||||||||| || ||||||||||||||||||| Sbjct: 144797 cggaggaggccgccgctgctgtggagaagctcaactccc 144759