BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107c09 (992 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060118.1| Oryza sativa (japonica cultivar-group) Os04g... 349 1e-92 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 349 1e-92 emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4,... 349 1e-92 dbj|AK108551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 1e-92 ref|NM_001054241.1| Oryza sativa (japonica cultivar-group) Os02g... 94 1e-15 >ref|NM_001060118.1| Oryza sativa (japonica cultivar-group) Os04g0566700 (Os04g0566700) mRNA, complete cds Length = 852 Score = 349 bits (176), Expect = 1e-92 Identities = 404/478 (84%), Gaps = 4/478 (0%) Strand = Plus / Plus Query: 107 ccggcgcacctacacgccgtaccagccggatggcctcagtctcccctcgctccgcgcgct 166 ||||||||| |||| |||| |||||||||| ||||||| || ||| |||||| ||| Sbjct: 76 ccggcgcacgtacaagccggaccagccggagggcctcaccatc---tcgttccgcgagct 132 Query: 167 ctacgatctgccgacctcgccggagttcctgttccaggaggaggagcgccgccagagtcg 226 |||||| ||||||||||||||||||||||||||||| ||||||| || |||| | || Sbjct: 133 ctacgacctgccgacctcgccggagttcctgttccacgaggaggcgctccgcagccgccg 192 Query: 227 cacctggggcgagaacgtaacgttctacaccggctgcggatacctcgtcggcgcggtggc 286 |||||| |||||| || | |||||||||||||||||||| |||||||||||| || ||| Sbjct: 193 cacctgtggcgaggacctcacgttctacaccggctgcggctacctcgtcggccgggcggc 252 Query: 287 cgggaccgccgcggggttcaggcgcgcggcgacggaggcggagcgcggcgagtcggccaa 346 ||| | ||||||||| | | |||||||||| |||||||||||||||||||||| || Sbjct: 253 gggggcggccgcggggctgaagcgcgcggcggaggaggcggagcgcggcgagtcgatgaa 312 Query: 347 gctgcgcgc-cagccgcgttctcaaccagtgcggctccgtggggcgcgggtacggcaacc 405 |||||| | ||||||||| |||||||||||||||||| | ||||||| ||||||||||| Sbjct: 313 gctgcgggggcagccgcgtcctcaaccagtgcggctccctcgggcgcgcgtacggcaacc 372 Query: 406 ggctgggcgtgatcgggctgctcttctcggggatcgagagcggcgttggtgggctccgcg 465 |||| ||||| ||| |||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 373 ggctcggcgtcgtcgcgctgctcttcgtggggatcgagagcaccgtggggggcctccgcg 432 Query: 466 acgctgacgactgggccaacaccatcgccgcggggctcgggactggcgtgctctaccgtg 525 |||| |||| ||||||||||||| ||||||| ||| |||| || |||| ||||||||| | Sbjct: 433 acgccgacggctgggccaacaccgtcgccgccgggatcggtaccggcgcgctctaccgcg 492 Query: 526 cggcttccggcccgcggtcgtcgatcgtcgccggcgccgtcggggagctcatggccgg 583 ||||| ||||||||||| || ||||||||| | || ||||||||| |||||||||||| Sbjct: 493 cggctgccggcccgcgggcggcgatcgtcggcagctccgtcggggggctcatggccgg 550 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 349 bits (176), Expect = 1e-92 Identities = 404/478 (84%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 107 ccggcgcacctacacgccgtaccagccggatggcctcagtctcccctcgctccgcgcgct 166 ||||||||| |||| |||| |||||||||| ||||||| || ||| |||||| ||| Sbjct: 28453550 ccggcgcacgtacaagccggaccagccggagggcctcaccatc---tcgttccgcgagct 28453494 Query: 167 ctacgatctgccgacctcgccggagttcctgttccaggaggaggagcgccgccagagtcg 226 |||||| ||||||||||||||||||||||||||||| ||||||| || |||| | || Sbjct: 28453493 ctacgacctgccgacctcgccggagttcctgttccacgaggaggcgctccgcagccgccg 28453434 Query: 227 cacctggggcgagaacgtaacgttctacaccggctgcggatacctcgtcggcgcggtggc 286 |||||| |||||| || | |||||||||||||||||||| |||||||||||| || ||| Sbjct: 28453433 cacctgtggcgaggacctcacgttctacaccggctgcggctacctcgtcggccgggcggc 28453374 Query: 287 cgggaccgccgcggggttcaggcgcgcggcgacggaggcggagcgcggcgagtcggccaa 346 ||| | ||||||||| | | |||||||||| |||||||||||||||||||||| || Sbjct: 28453373 gggggcggccgcggggctgaagcgcgcggcggaggaggcggagcgcggcgagtcgatgaa 28453314 Query: 347 gctgcgcgc-cagccgcgttctcaaccagtgcggctccgtggggcgcgggtacggcaacc 405 |||||| | ||||||||| |||||||||||||||||| | ||||||| ||||||||||| Sbjct: 28453313 gctgcgggggcagccgcgtcctcaaccagtgcggctccctcgggcgcgcgtacggcaacc 28453254 Query: 406 ggctgggcgtgatcgggctgctcttctcggggatcgagagcggcgttggtgggctccgcg 465 |||| ||||| ||| |||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 28453253 ggctcggcgtcgtcgcgctgctcttcgtggggatcgagagcaccgtggggggcctccgcg 28453194 Query: 466 acgctgacgactgggccaacaccatcgccgcggggctcgggactggcgtgctctaccgtg 525 |||| |||| ||||||||||||| ||||||| ||| |||| || |||| ||||||||| | Sbjct: 28453193 acgccgacggctgggccaacaccgtcgccgccgggatcggtaccggcgcgctctaccgcg 28453134 Query: 526 cggcttccggcccgcggtcgtcgatcgtcgccggcgccgtcggggagctcatggccgg 583 ||||| ||||||||||| || ||||||||| | || ||||||||| |||||||||||| Sbjct: 28453133 cggctgccggcccgcgggcggcgatcgtcggcagctccgtcggggggctcatggccgg 28453076 >emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 349 bits (176), Expect = 1e-92 Identities = 404/478 (84%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 107 ccggcgcacctacacgccgtaccagccggatggcctcagtctcccctcgctccgcgcgct 166 ||||||||| |||| |||| |||||||||| ||||||| || ||| |||||| ||| Sbjct: 102225 ccggcgcacgtacaagccggaccagccggagggcctcaccatc---tcgttccgcgagct 102169 Query: 167 ctacgatctgccgacctcgccggagttcctgttccaggaggaggagcgccgccagagtcg 226 |||||| ||||||||||||||||||||||||||||| ||||||| || |||| | || Sbjct: 102168 ctacgacctgccgacctcgccggagttcctgttccacgaggaggcgctccgcagccgccg 102109 Query: 227 cacctggggcgagaacgtaacgttctacaccggctgcggatacctcgtcggcgcggtggc 286 |||||| |||||| || | |||||||||||||||||||| |||||||||||| || ||| Sbjct: 102108 cacctgtggcgaggacctcacgttctacaccggctgcggctacctcgtcggccgggcggc 102049 Query: 287 cgggaccgccgcggggttcaggcgcgcggcgacggaggcggagcgcggcgagtcggccaa 346 ||| | ||||||||| | | |||||||||| |||||||||||||||||||||| || Sbjct: 102048 gggggcggccgcggggctgaagcgcgcggcggaggaggcggagcgcggcgagtcgatgaa 101989 Query: 347 gctgcgcgc-cagccgcgttctcaaccagtgcggctccgtggggcgcgggtacggcaacc 405 |||||| | ||||||||| |||||||||||||||||| | ||||||| ||||||||||| Sbjct: 101988 gctgcgggggcagccgcgtcctcaaccagtgcggctccctcgggcgcgcgtacggcaacc 101929 Query: 406 ggctgggcgtgatcgggctgctcttctcggggatcgagagcggcgttggtgggctccgcg 465 |||| ||||| ||| |||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 101928 ggctcggcgtcgtcgcgctgctcttcgtggggatcgagagcaccgtggggggcctccgcg 101869 Query: 466 acgctgacgactgggccaacaccatcgccgcggggctcgggactggcgtgctctaccgtg 525 |||| |||| ||||||||||||| ||||||| ||| |||| || |||| ||||||||| | Sbjct: 101868 acgccgacggctgggccaacaccgtcgccgccgggatcggtaccggcgcgctctaccgcg 101809 Query: 526 cggcttccggcccgcggtcgtcgatcgtcgccggcgccgtcggggagctcatggccgg 583 ||||| ||||||||||| || ||||||||| | || ||||||||| |||||||||||| Sbjct: 101808 cggctgccggcccgcgggcggcgatcgtcggcagctccgtcggggggctcatggccgg 101751 >dbj|AK108551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E05, full insert sequence Length = 851 Score = 349 bits (176), Expect = 1e-92 Identities = 404/478 (84%), Gaps = 4/478 (0%) Strand = Plus / Plus Query: 107 ccggcgcacctacacgccgtaccagccggatggcctcagtctcccctcgctccgcgcgct 166 ||||||||| |||| |||| |||||||||| ||||||| || ||| |||||| ||| Sbjct: 75 ccggcgcacgtacaagccggaccagccggagggcctcaccatc---tcgttccgcgagct 131 Query: 167 ctacgatctgccgacctcgccggagttcctgttccaggaggaggagcgccgccagagtcg 226 |||||| ||||||||||||||||||||||||||||| ||||||| || |||| | || Sbjct: 132 ctacgacctgccgacctcgccggagttcctgttccacgaggaggcgctccgcagccgccg 191 Query: 227 cacctggggcgagaacgtaacgttctacaccggctgcggatacctcgtcggcgcggtggc 286 |||||| |||||| || | |||||||||||||||||||| |||||||||||| || ||| Sbjct: 192 cacctgtggcgaggacctcacgttctacaccggctgcggctacctcgtcggccgggcggc 251 Query: 287 cgggaccgccgcggggttcaggcgcgcggcgacggaggcggagcgcggcgagtcggccaa 346 ||| | ||||||||| | | |||||||||| |||||||||||||||||||||| || Sbjct: 252 gggggcggccgcggggctgaagcgcgcggcggaggaggcggagcgcggcgagtcgatgaa 311 Query: 347 gctgcgcgc-cagccgcgttctcaaccagtgcggctccgtggggcgcgggtacggcaacc 405 |||||| | ||||||||| |||||||||||||||||| | ||||||| ||||||||||| Sbjct: 312 gctgcgggggcagccgcgtcctcaaccagtgcggctccctcgggcgcgcgtacggcaacc 371 Query: 406 ggctgggcgtgatcgggctgctcttctcggggatcgagagcggcgttggtgggctccgcg 465 |||| ||||| ||| |||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 372 ggctcggcgtcgtcgcgctgctcttcgtggggatcgagagcaccgtggggggcctccgcg 431 Query: 466 acgctgacgactgggccaacaccatcgccgcggggctcgggactggcgtgctctaccgtg 525 |||| |||| ||||||||||||| ||||||| ||| |||| || |||| ||||||||| | Sbjct: 432 acgccgacggctgggccaacaccgtcgccgccgggatcggtaccggcgcgctctaccgcg 491 Query: 526 cggcttccggcccgcggtcgtcgatcgtcgccggcgccgtcggggagctcatggccgg 583 ||||| ||||||||||| || ||||||||| | || ||||||||| |||||||||||| Sbjct: 492 cggctgccggcccgcgggcggcgatcgtcggcagctccgtcggggggctcatggccgg 549 >ref|NM_001054241.1| Oryza sativa (japonica cultivar-group) Os02g0672500 (Os02g0672500) mRNA, complete cds Length = 2070 Score = 93.7 bits (47), Expect = 1e-15 Identities = 89/103 (86%) Strand = Plus / Plus Query: 158 ccgcgcgctctacgatctgccgacctcgccggagttcctgttccaggaggaggagcgccg 217 ||||||||||||||| ||||| ||||||||||||| ||| ||| ||||||| || ||| Sbjct: 170 ccgcgcgctctacgacctgcccacctcgccggagtgcctcttcgaggaggacaagttccg 229 Query: 218 ccagagtcgcacctggggcgagaacgtaacgttctacaccggc 260 |||| |||||||||||||||||| | ||||||||||||||| Sbjct: 230 gcagacccgcacctggggcgagaacctcacgttctacaccggc 272