BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem107b04 (1004 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829264.1| Oryza sativa (indica cultivar-group) cDNA clone:... 293 7e-76 ref|NM_001063602.1| Oryza sativa (japonica cultivar-group) Os06g... 293 7e-76 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 293 7e-76 dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic D... 293 7e-76 dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 293 7e-76 >emb|CT829264.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN125P11, full insert sequence Length = 1266 Score = 293 bits (148), Expect = 7e-76 Identities = 269/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 261 catggaggtggaggccgccaagtgcgagtgctgcggcttcacggaggagtgcacgccgca 320 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 468 catggaggtggaggcagccaggtgcgagtgctgcggcttcacggaggagtgcacgccgcg 527 Query: 321 gtacatcgcggcggtgaggggggagtacctgggccggtggatctgcgggctctgcgcgga 380 |||||||||||||||| ||| ||||||| |||| |||||| | ||||| ||||||||||| Sbjct: 528 gtacatcgcggcggtgcgggaggagtacatggggcggtgggtgtgcggcctctgcgcgga 587 Query: 381 ggccgtcggcgacgagatccgccgcgcgggcgccggggag------ataaccacggcgga 434 |||||| |||||||||||||||||||| ||||||||| || || ||||||||||| Sbjct: 588 ggccgtgggcgacgagatccgccgcgccggcgccgggaaggccaccatcaccacggcgga 647 Query: 435 ggcgctcgaccggcacgtcgcgttcgctcg---cgcggcgccgcgggcgcccgggagggc 491 |||||||||||||||||| |||||||| || ||| |||||||| ||| || || Sbjct: 648 ggcgctcgaccggcacgttgcgttcgcgcgctccgccgcgccgcgcgcggtgggcgccgc 707 Query: 492 cgcggaggacgacctcgtcgccgccgtcgcgcgcctgctccgtcgctgcctcgactcgcc 551 ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| Sbjct: 708 ggcggaggacgacctcgtcgccgccgtctcgaggctgctccgccgctgcctcgactcgcc 767 Query: 552 gccggcgtc 560 |||||||| Sbjct: 768 accggcgtc 776 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 74 gagacgtcgcctgcgatgacaccggccacatcggccgccgacaccgtcatcg 125 ||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 273 gagacgtcgcctgcgatgacaccggcctcacccgccgccgacaccgtcatcg 324 >ref|NM_001063602.1| Oryza sativa (japonica cultivar-group) Os06g0199400 (Os06g0199400) mRNA, complete cds Length = 564 Score = 293 bits (148), Expect = 7e-76 Identities = 269/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 261 catggaggtggaggccgccaagtgcgagtgctgcggcttcacggaggagtgcacgccgca 320 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 396 catggaggtggaggcagccaggtgcgagtgctgcggcttcacggaggagtgcacgccgcg 337 Query: 321 gtacatcgcggcggtgaggggggagtacctgggccggtggatctgcgggctctgcgcgga 380 |||||||||||||||| ||| ||||||| |||| |||||| | ||||| ||||||||||| Sbjct: 336 gtacatcgcggcggtgcgggaggagtacatggggcggtgggtgtgcggcctctgcgcgga 277 Query: 381 ggccgtcggcgacgagatccgccgcgcgggcgccggggag------ataaccacggcgga 434 |||||| |||||||||||||||||||| ||||||||| || || ||||||||||| Sbjct: 276 ggccgtgggcgacgagatccgccgcgccggcgccgggaaggccaccatcaccacggcgga 217 Query: 435 ggcgctcgaccggcacgtcgcgttcgctcg---cgcggcgccgcgggcgcccgggagggc 491 |||||||||||||||||| |||||||| || ||| |||||||| ||| || || Sbjct: 216 ggcgctcgaccggcacgttgcgttcgcgcgctccgccgcgccgcgcgcggggggcgccgc 157 Query: 492 cgcggaggacgacctcgtcgccgccgtcgcgcgcctgctccgtcgctgcctcgactcgcc 551 ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| Sbjct: 156 ggcggaggacgacctcgtcgccgccgtctcgaggctgctccgccgctgcctcgactcgcc 97 Query: 552 gccggcgtc 560 |||||||| Sbjct: 96 accggcgtc 88 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 293 bits (148), Expect = 7e-76 Identities = 269/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 261 catggaggtggaggccgccaagtgcgagtgctgcggcttcacggaggagtgcacgccgca 320 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5056597 catggaggtggaggcagccaggtgcgagtgctgcggcttcacggaggagtgcacgccgcg 5056538 Query: 321 gtacatcgcggcggtgaggggggagtacctgggccggtggatctgcgggctctgcgcgga 380 |||||||||||||||| ||| ||||||| |||| |||||| | ||||| ||||||||||| Sbjct: 5056537 gtacatcgcggcggtgcgggaggagtacatggggcggtgggtgtgcggcctctgcgcgga 5056478 Query: 381 ggccgtcggcgacgagatccgccgcgcgggcgccggggag------ataaccacggcgga 434 |||||| |||||||||||||||||||| ||||||||| || || ||||||||||| Sbjct: 5056477 ggccgtgggcgacgagatccgccgcgccggcgccgggaaggccaccatcaccacggcgga 5056418 Query: 435 ggcgctcgaccggcacgtcgcgttcgctcg---cgcggcgccgcgggcgcccgggagggc 491 |||||||||||||||||| |||||||| || ||| |||||||| ||| || || Sbjct: 5056417 ggcgctcgaccggcacgttgcgttcgcgcgctccgccgcgccgcgcgcggggggcgccgc 5056358 Query: 492 cgcggaggacgacctcgtcgccgccgtcgcgcgcctgctccgtcgctgcctcgactcgcc 551 ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| Sbjct: 5056357 ggcggaggacgacctcgtcgccgccgtctcgaggctgctccgccgctgcctcgactcgcc 5056298 Query: 552 gccggcgtc 560 |||||||| Sbjct: 5056297 accggcgtc 5056289 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 74 gagacgtcgcctgcgatgacaccggccacatcggccgccgacaccgtcatcg 125 ||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 5056792 gagacgtcgcctgcgatgacaccggcctcacccgccgccgacaccgtcatcg 5056741 >dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 293 bits (148), Expect = 7e-76 Identities = 269/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 261 catggaggtggaggccgccaagtgcgagtgctgcggcttcacggaggagtgcacgccgca 320 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 15635 catggaggtggaggcagccaggtgcgagtgctgcggcttcacggaggagtgcacgccgcg 15576 Query: 321 gtacatcgcggcggtgaggggggagtacctgggccggtggatctgcgggctctgcgcgga 380 |||||||||||||||| ||| ||||||| |||| |||||| | ||||| ||||||||||| Sbjct: 15575 gtacatcgcggcggtgcgggaggagtacatggggcggtgggtgtgcggcctctgcgcgga 15516 Query: 381 ggccgtcggcgacgagatccgccgcgcgggcgccggggag------ataaccacggcgga 434 |||||| |||||||||||||||||||| ||||||||| || || ||||||||||| Sbjct: 15515 ggccgtgggcgacgagatccgccgcgccggcgccgggaaggccaccatcaccacggcgga 15456 Query: 435 ggcgctcgaccggcacgtcgcgttcgctcg---cgcggcgccgcgggcgcccgggagggc 491 |||||||||||||||||| |||||||| || ||| |||||||| ||| || || Sbjct: 15455 ggcgctcgaccggcacgttgcgttcgcgcgctccgccgcgccgcgcgcggggggcgccgc 15396 Query: 492 cgcggaggacgacctcgtcgccgccgtcgcgcgcctgctccgtcgctgcctcgactcgcc 551 ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| Sbjct: 15395 ggcggaggacgacctcgtcgccgccgtctcgaggctgctccgccgctgcctcgactcgcc 15336 Query: 552 gccggcgtc 560 |||||||| Sbjct: 15335 accggcgtc 15327 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 74 gagacgtcgcctgcgatgacaccggccacatcggccgccgacaccgtcatcg 125 ||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 15830 gagacgtcgcctgcgatgacaccggcctcacccgccgccgacaccgtcatcg 15779 >dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 293 bits (148), Expect = 7e-76 Identities = 269/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 261 catggaggtggaggccgccaagtgcgagtgctgcggcttcacggaggagtgcacgccgca 320 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 98711 catggaggtggaggcagccaggtgcgagtgctgcggcttcacggaggagtgcacgccgcg 98652 Query: 321 gtacatcgcggcggtgaggggggagtacctgggccggtggatctgcgggctctgcgcgga 380 |||||||||||||||| ||| ||||||| |||| |||||| | ||||| ||||||||||| Sbjct: 98651 gtacatcgcggcggtgcgggaggagtacatggggcggtgggtgtgcggcctctgcgcgga 98592 Query: 381 ggccgtcggcgacgagatccgccgcgcgggcgccggggag------ataaccacggcgga 434 |||||| |||||||||||||||||||| ||||||||| || || ||||||||||| Sbjct: 98591 ggccgtgggcgacgagatccgccgcgccggcgccgggaaggccaccatcaccacggcgga 98532 Query: 435 ggcgctcgaccggcacgtcgcgttcgctcg---cgcggcgccgcgggcgcccgggagggc 491 |||||||||||||||||| |||||||| || ||| |||||||| ||| || || Sbjct: 98531 ggcgctcgaccggcacgttgcgttcgcgcgctccgccgcgccgcgcgcggggggcgccgc 98472 Query: 492 cgcggaggacgacctcgtcgccgccgtcgcgcgcctgctccgtcgctgcctcgactcgcc 551 ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| Sbjct: 98471 ggcggaggacgacctcgtcgccgccgtctcgaggctgctccgccgctgcctcgactcgcc 98412 Query: 552 gccggcgtc 560 |||||||| Sbjct: 98411 accggcgtc 98403 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 74 gagacgtcgcctgcgatgacaccggccacatcggccgccgacaccgtcatcg 125 ||||||||||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 98906 gagacgtcgcctgcgatgacaccggcctcacccgccgccgacaccgtcatcg 98855