BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem106m22 (1094 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243244.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 365 3e-97 ref|NM_001073289.1| Oryza sativa (japonica cultivar-group) Os12g... 365 3e-97 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 188 3e-44 emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 188 3e-44 ref|NM_001068893.1| Oryza sativa (japonica cultivar-group) Os08g... 94 1e-15 >dbj|AK243244.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100046N20, full insert sequence Length = 1205 Score = 365 bits (184), Expect = 3e-97 Identities = 265/292 (90%) Strand = Plus / Plus Query: 209 gctgccgccggggttcaggttccgccccaccgacgaggagctagtcgtgcactacctccg 268 |||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 147 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 206 Query: 269 ccgccgggcgctcgcctcgccgctccccgccgccgtcgacatccccgacgtccgcctcct 328 |||||| ||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| Sbjct: 207 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 266 Query: 329 cgcgcacgacccctccgacctcctgcccccagggtggagtgagcaggagaggtacttctt 388 |||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 267 cgcgcatgacccctccgacctgcttcctccagggtggagtgagcaggagaggtacttctt 326 Query: 389 cacctgcaaggaggccaagtacgtcaagggcccacgcgcgaaccgcgccaccggcgccgg 448 ||| ||||||||||||||||| |||||||| | ||||| ||||||||||| |||||||| Sbjct: 327 cacgtgcaaggaggccaagtatgtcaaggggcgccgcgccaaccgcgccacgggcgccgg 386 Query: 449 gtactggaaggccacggggaaggagaagccggtcgccgtggccgtgccggcg 500 |||||||||||| |||||||||||||||||||| || ||| ||||| ||||| Sbjct: 387 gtactggaaggcgacggggaaggagaagccggtggcggtgtccgtggcggcg 438 Score = 188 bits (95), Expect = 3e-44 Identities = 119/127 (93%) Strand = Plus / Plus Query: 523 ccgtcgtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 582 |||||||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 461 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 520 Query: 583 agaagaccaactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 642 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 580 Query: 643 gccgcgc 649 ||||||| Sbjct: 581 gccgcgc 587 Score = 133 bits (67), Expect = 2e-27 Identities = 111/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 799 tccggttcatcgacttctttgcgcgggcggacgcgctgcggcggcgtcgggcggcgtcgc 858 ||||||||||||||||||| || || || ||||||| ||||||| || |||||||||| Sbjct: 746 tccggttcatcgacttcttcgcccgcgccgacgcgc---ggcggcgccgcgcggcgtcgc 802 Query: 859 cggtgtcgtcgagctgcgtgaccgacgcctcggccgagcattgcagggagcaggagacca 918 |||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| | Sbjct: 803 cggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggagacga 862 Query: 919 cgagc 923 ||||| Sbjct: 863 cgagc 867 >ref|NM_001073289.1| Oryza sativa (japonica cultivar-group) Os12g0477400 (Os12g0477400) mRNA, complete cds Length = 783 Score = 365 bits (184), Expect = 3e-97 Identities = 265/292 (90%) Strand = Plus / Plus Query: 209 gctgccgccggggttcaggttccgccccaccgacgaggagctagtcgtgcactacctccg 268 |||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 24 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 83 Query: 269 ccgccgggcgctcgcctcgccgctccccgccgccgtcgacatccccgacgtccgcctcct 328 |||||| ||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| Sbjct: 84 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 143 Query: 329 cgcgcacgacccctccgacctcctgcccccagggtggagtgagcaggagaggtacttctt 388 |||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 144 cgcgcatgacccctccgacctgcttcctccagggtggagtgagcaggagaggtacttctt 203 Query: 389 cacctgcaaggaggccaagtacgtcaagggcccacgcgcgaaccgcgccaccggcgccgg 448 ||| ||||||||||||||||| |||||||| | ||||| ||||||||||| |||||||| Sbjct: 204 cacgtgcaaggaggccaagtatgtcaaggggcgccgcgccaaccgcgccacgggcgccgg 263 Query: 449 gtactggaaggccacggggaaggagaagccggtcgccgtggccgtgccggcg 500 |||||||||||| |||||||||||||||||||| || ||| ||||| ||||| Sbjct: 264 gtactggaaggcgacggggaaggagaagccggtggcggtgtccgtggcggcg 315 Score = 188 bits (95), Expect = 3e-44 Identities = 119/127 (93%) Strand = Plus / Plus Query: 523 ccgtcgtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 582 |||||||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 338 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 397 Query: 583 agaagaccaactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 642 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 457 Query: 643 gccgcgc 649 ||||||| Sbjct: 458 gccgcgc 464 Score = 133 bits (67), Expect = 2e-27 Identities = 111/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 799 tccggttcatcgacttctttgcgcgggcggacgcgctgcggcggcgtcgggcggcgtcgc 858 ||||||||||||||||||| || || || ||||||| ||||||| || |||||||||| Sbjct: 623 tccggttcatcgacttcttcgcccgcgccgacgcgc---ggcggcgccgcgcggcgtcgc 679 Query: 859 cggtgtcgtcgagctgcgtgaccgacgcctcggccgagcattgcagggagcaggagacca 918 |||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| | Sbjct: 680 cggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggagacga 739 Query: 919 cgagc 923 ||||| Sbjct: 740 cgagc 744 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 188 bits (95), Expect = 3e-44 Identities = 131/143 (91%) Strand = Plus / Plus Query: 358 cagggtggagtgagcaggagaggtacttcttcacctgcaaggaggccaagtacgtcaagg 417 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 17432601 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtatgtcaagg 17432660 Query: 418 gcccacgcgcgaaccgcgccaccggcgccgggtactggaaggccacggggaaggagaagc 477 | | ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 17432661 ggcgccgcgccaaccgcgccacgggcgccgggtactggaaggcgacggggaaggagaagc 17432720 Query: 478 cggtcgccgtggccgtgccggcg 500 |||| || ||| ||||| ||||| Sbjct: 17432721 cggtggcggtgtccgtggcggcg 17432743 Score = 188 bits (95), Expect = 3e-44 Identities = 119/127 (93%) Strand = Plus / Plus Query: 523 ccgtcgtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 582 |||||||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 17432766 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 17432825 Query: 583 agaagaccaactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 642 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17432826 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 17432885 Query: 643 gccgcgc 649 ||||||| Sbjct: 17432886 gccgcgc 17432892 Score = 184 bits (93), Expect = 5e-43 Identities = 129/141 (91%) Strand = Plus / Plus Query: 209 gctgccgccggggttcaggttccgccccaccgacgaggagctagtcgtgcactacctccg 268 |||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 17432369 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 17432428 Query: 269 ccgccgggcgctcgcctcgccgctccccgccgccgtcgacatccccgacgtccgcctcct 328 |||||| ||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| Sbjct: 17432429 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 17432488 Query: 329 cgcgcacgacccctccgacct 349 |||||| |||||||||||||| Sbjct: 17432489 cgcgcatgacccctccgacct 17432509 Score = 133 bits (67), Expect = 2e-27 Identities = 111/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 799 tccggttcatcgacttctttgcgcgggcggacgcgctgcggcggcgtcgggcggcgtcgc 858 ||||||||||||||||||| || || || ||||||| ||||||| || |||||||||| Sbjct: 17433051 tccggttcatcgacttcttcgcccgcgccgacgcgc---ggcggcgccgcgcggcgtcgc 17433107 Query: 859 cggtgtcgtcgagctgcgtgaccgacgcctcggccgagcattgcagggagcaggagacca 918 |||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| | Sbjct: 17433108 cggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggagacga 17433167 Query: 919 cgagc 923 ||||| Sbjct: 17433168 cgagc 17433172 >emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 188 bits (95), Expect = 3e-44 Identities = 119/127 (93%) Strand = Plus / Minus Query: 523 ccgtcgtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 582 |||||||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 99640 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 99581 Query: 583 agaagaccaactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 642 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99580 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 99521 Query: 643 gccgcgc 649 ||||||| Sbjct: 99520 gccgcgc 99514 Score = 188 bits (95), Expect = 3e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 358 cagggtggagtgagcaggagaggtacttcttcacctgcaaggaggccaagtacgtcaagg 417 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 99805 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtatgtcaagg 99746 Query: 418 gcccacgcgcgaaccgcgccaccggcgccgggtactggaaggccacggggaaggagaagc 477 | | ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 99745 ggcgccgcgccaaccgcgccacgggcgccgggtactggaaggcgacggggaaggagaagc 99686 Query: 478 cggtcgccgtggccgtgccggcg 500 |||| || ||| ||||| ||||| Sbjct: 99685 cggtggcggtgtccgtggcggcg 99663 Score = 184 bits (93), Expect = 5e-43 Identities = 129/141 (91%) Strand = Plus / Minus Query: 209 gctgccgccggggttcaggttccgccccaccgacgaggagctagtcgtgcactacctccg 268 |||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 100037 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 99978 Query: 269 ccgccgggcgctcgcctcgccgctccccgccgccgtcgacatccccgacgtccgcctcct 328 |||||| ||||||| ||| || ||||| ||||||||||||||||||| ||||||||||| Sbjct: 99977 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 99918 Query: 329 cgcgcacgacccctccgacct 349 |||||| |||||||||||||| Sbjct: 99917 cgcgcatgacccctccgacct 99897 Score = 133 bits (67), Expect = 2e-27 Identities = 111/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Minus Query: 799 tccggttcatcgacttctttgcgcgggcggacgcgctgcggcggcgtcgggcggcgtcgc 858 ||||||||||||||||||| || || || ||||||| ||||||| || |||||||||| Sbjct: 99355 tccggttcatcgacttcttcgcccgcgccgacgcgc---ggcggcgccgcgcggcgtcgc 99299 Query: 859 cggtgtcgtcgagctgcgtgaccgacgcctcggccgagcattgcagggagcaggagacca 918 |||||||||||||||||||||| || || ||||| ||||||||||||||||||||||| | Sbjct: 99298 cggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggagacga 99239 Query: 919 cgagc 923 ||||| Sbjct: 99238 cgagc 99234 >ref|NM_001068893.1| Oryza sativa (japonica cultivar-group) Os08g0535800 (Os08g0535800) mRNA, complete cds Length = 1523 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 211 tgccgccggggttcaggttccgccccaccgacgaggagctagtcgtgcactacctccgcc 270 ||||||||||||||||||||| ||| || ||||||||||| || ||||| |||||||||| Sbjct: 393 tgccgccggggttcaggttccacccgacggacgaggagctcgtggtgcagtacctccgcc 452 Query: 271 gccgggcgctcgcctcgccgctccccgccgccgtc 305 || |||| ||| | ||||||||||||||||||| Sbjct: 453 gcaaggcgttcggcctgccgctccccgccgccgtc 487