BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem106i09 (1006 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072736.1| Oryza sativa (japonica cultivar-group) Os12g... 737 0.0 gb|AY105101.1| Zea mays PCO066358 mRNA sequence 448 e-122 dbj|AK243189.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 408 e-110 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 287 4e-74 emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb... 287 4e-74 >ref|NM_001072736.1| Oryza sativa (japonica cultivar-group) Os12g0158600 (Os12g0158600) mRNA, complete cds Length = 636 Score = 737 bits (372), Expect = 0.0 Identities = 479/514 (93%), Gaps = 3/514 (0%) Strand = Plus / Plus Query: 178 atgttgggggagctcctgtccaagatcctgctgctgctgttcgggtatgcgatgccggcg 237 ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| Sbjct: 1 atgttgggggagctcctctccaggatcctgctgctgctgttcgggtacgcgatgccggcg 60 Query: 238 ttcgagtgcttcaagacggtggagacgcggcccaacgacgcgcacatgctccgcttctgg 297 |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| Sbjct: 61 ttcgagtgcttcaagacggtggaggcgcgccccaacgacgcccacatgctccgcttctgg 120 Query: 298 tgccagtactggattattgtggccatggtgatagcctttgagagcgtcatctcatggatg 357 ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 121 tgccagtactggattattgtggccatggtaatagcctttgagagcctcatctcatggatg 180 Query: 358 ccaatgtatggagaaattaagctagctttctttgtttacctgtggtaccctaaaacaaag 417 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 181 ccaatgtatggagaaattaagctagctttctttgtttacctgtggtatcccaaaacaaag 240 Query: 418 ggcagtgatgttgtatatgacaccttccttcggcccattgtgatgcaatatgaaccaaac 477 || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 241 ggaagtgatgttgtatatgataccttccttcggcccattgtaatgcaatatgaaccaaac 300 Query: 478 atcgagcagaggttactgcatctgagggcgaaatctgggcagctacttagcttctacatt 537 || || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atagaacagaggttactgcatctgagggcgaaatctgggcagctacttagcttctacatg 360 Query: 538 aagaattttgcagacaaagggacagctttctttatggatgtcctgcgctatgtggtttct 597 ||||| ||||| ||||| |||||||||||||| |||||||||||||||||||| || ||| Sbjct: 361 aagaactttgccgacaaggggacagctttcttcatggatgtcctgcgctatgttgtctct 420 Query: 598 gacaaacctgaaggatccagtgcagagcagaggaacaagaaatc---cagctggagcccc 654 || |||||||| ||||||| | ||||||| | |||||||| || | ||||||||||| Sbjct: 421 gataaacctgagggatccaatcaagagcagcgcaacaagaagtccggcggctggagcccc 480 Query: 655 ttcgcgaccaaacgccggccaccgtctccgccgc 688 |||||||||||||||||||||||||| ||||||| Sbjct: 481 ttcgcgaccaaacgccggccaccgtcgccgccgc 514 >gb|AY105101.1| Zea mays PCO066358 mRNA sequence Length = 764 Score = 448 bits (226), Expect = e-122 Identities = 391/446 (87%) Strand = Plus / Plus Query: 178 atgttgggggagctcctgtccaagatcctgctgctgctgttcgggtatgcgatgccggcg 237 |||||||| || ||||| |||| |||||| ||||| |||||||| || || ||||||||| Sbjct: 319 atgttgggcgacctcctctccaggatcctcctgctcctgttcggctacgccatgccggcg 378 Query: 238 ttcgagtgcttcaagacggtggagacgcggcccaacgacgcgcacatgctccgcttctgg 297 |||||||||||||||||||| ||| |||| ||||||||||| | |||||| ||||||||| Sbjct: 379 ttcgagtgcttcaagacggtcgaggcgcgccccaacgacgcccgcatgctgcgcttctgg 438 Query: 298 tgccagtactggattattgtggccatggtgatagcctttgagagcgtcatctcatggatg 357 ||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||| Sbjct: 439 tgccagtactggattatcgtggccatggtgatagctgttgagagcgtgatctcttggatg 498 Query: 358 ccaatgtatggagaaattaagctagctttctttgtttacctgtggtaccctaaaacaaag 417 ||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 499 ccaatgtattcagaaatgaagctagctttctttgtgtacctgtggtaccccaaaactaag 558 Query: 418 ggcagtgatgttgtatatgacaccttccttcggcccattgtgatgcaatatgaaccaaac 477 || ||||| ||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 559 ggaagtgacgttgtatatgacacctttcttcgccccatagttatgcaatatgaaccgaac 618 Query: 478 atcgagcagaggttactgcatctgagggcgaaatctgggcagctacttagcttctacatt 537 ||||||||||| || | ||||| ||||| |||||||||||| || || ||||||||| Sbjct: 619 atcgagcagagattgttccatctaagggcaaaatctgggcagttaatttccttctacatg 678 Query: 538 aagaattttgcagacaaagggacagctttctttatggatgtcctgcgctatgtggtttct 597 ||||||||||| || ||||| ||||| ||||| ||||||||||| || ||||| || ||| Sbjct: 679 aagaattttgcggataaaggaacagccttcttcatggatgtcctccgttatgtcgtatct 738 Query: 598 gacaaacctgaaggatccagtgcaga 623 || |||||||||||||||| |||||| Sbjct: 739 gagaaacctgaaggatccaatgcaga 764 >dbj|AK243189.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100039G08, full insert sequence Length = 2565 Score = 408 bits (206), Expect = e-110 Identities = 379/434 (87%), Gaps = 2/434 (0%) Strand = Plus / Plus Query: 178 atgttgggggagctcctgtccaagatcctgctgctgctgttcgggtatgcgatgccggcg 237 |||||||| |||||| | |||||| |||| ||| ||||||||||||| || ||||||||| Sbjct: 38 atgttgggcgagctcatctccaaggtcctactggtgctgttcgggtacgccatgccggcg 97 Query: 238 ttcgagtgcttcaagacggtggagacgcggcccaacgacgcgcacatgctccgcttctgg 297 |||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||| Sbjct: 98 ttcgagtgcttcaagacgctggagacgcgacccgacgacgcgcacatgctccgcttctgg 157 Query: 298 tgccagtactggattattgtggccatggtgatagcctttgagagcgtcatctcatggatg 357 |||||||||||||| || ||| ||||||||||||| | ||||||| || ||||||||||| Sbjct: 158 tgccagtactggatcatagtgtccatggtgatagcttgtgagagcttcgtctcatggatg 217 Query: 358 ccaatgtatggagaaattaagctagctttctttgtttacctgtggtaccctaaaacaaag 417 |||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| Sbjct: 218 ccaatgtatggagaaattaagctagctttctttgtttatctgtggtatcccaaaacgaag 277 Query: 418 ggcagtgatgttgtatatgacaccttccttcggcccattgtgatgcaatatgaaccaaac 477 ||||||||||| || |||||| ||||| ||||||| | ||||||||||| |||||||| Sbjct: 278 ggcagtgatgtggtgtatgactccttcattcggcctacagtgatgcaatacgaaccaaat 337 Query: 478 atcgagcagaggttactgcatctgagggcgaaatctgggcagctacttagc-ttctacat 536 || ||||||||| | |||||| || || || ||||| ||||| |||| |||||||| Sbjct: 338 attgagcagaggcttgagcatcttagagctaactctggccagct-gatagcattctacat 396 Query: 537 taagaattttgcagacaaagggacagctttctttatggatgtcctgcgctatgtggtttc 596 ||||| || || |||||||||||||||||||| ||||| ||||||||||||| ||||| Sbjct: 397 caagaacttcgctgacaaagggacagctttcttcatggacttcctgcgctatgttgtttc 456 Query: 597 tgacaaacctgaag 610 ||| | |||||||| Sbjct: 457 tgaaagacctgaag 470 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 287 bits (145), Expect = 4e-74 Identities = 187/201 (93%) Strand = Plus / Plus Query: 416 agggcagtgatgttgtatatgacaccttccttcggcccattgtgatgcaatatgaaccaa 475 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 2931125 agggaagtgatgttgtatatgataccttccttcggcccattgtaatgcaatatgaaccaa 2931184 Query: 476 acatcgagcagaggttactgcatctgagggcgaaatctgggcagctacttagcttctaca 535 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2931185 acatagaacagaggttactgcatctgagggcgaaatctgggcagctacttagcttctaca 2931244 Query: 536 ttaagaattttgcagacaaagggacagctttctttatggatgtcctgcgctatgtggttt 595 | ||||| ||||| ||||| |||||||||||||| |||||||||||||||||||| || | Sbjct: 2931245 tgaagaactttgccgacaaggggacagctttcttcatggatgtcctgcgctatgttgtct 2931304 Query: 596 ctgacaaacctgaaggatcca 616 |||| |||||||| ||||||| Sbjct: 2931305 ctgataaacctgagggatcca 2931325 Score = 167 bits (84), Expect = 1e-37 Identities = 96/100 (96%) Strand = Plus / Plus Query: 210 gctgctgttcgggtatgcgatgccggcgttcgagtgcttcaagacggtggagacgcggcc 269 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| || Sbjct: 2927359 gctgctgttcgggtacgcgatgccggcgttcgagtgcttcaagacggtggaggcgcgccc 2927418 Query: 270 caacgacgcgcacatgctccgcttctggtgccagtactgg 309 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 2927419 caacgacgcccacatgctccgcttctggtgccagtactgg 2927458 Score = 115 bits (58), Expect = 4e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 353 ggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtaccctaaaa 412 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 2930935 ggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtatcccaaaa 2930994 Query: 413 caaagg 418 |||||| Sbjct: 2930995 caaagg 2931000 Score = 81.8 bits (41), Expect = 5e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 644 gctggagccccttcgcgaccaaacgccggccaccgtctccgccgc 688 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2933290 gctggagccccttcgcgaccaaacgccggccaccgtcgccgccgc 2933334 Score = 77.8 bits (39), Expect = 8e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 308 ggattattgtggccatggtgatagcctttgagagcgtcatctcatgg 354 ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 2930793 ggattattgtggccatggtaatagcctttgagagcctcatctcatgg 2930839 >emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 287 bits (145), Expect = 4e-74 Identities = 187/201 (93%) Strand = Plus / Minus Query: 416 agggcagtgatgttgtatatgacaccttccttcggcccattgtgatgcaatatgaaccaa 475 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 84977 agggaagtgatgttgtatatgataccttccttcggcccattgtaatgcaatatgaaccaa 84918 Query: 476 acatcgagcagaggttactgcatctgagggcgaaatctgggcagctacttagcttctaca 535 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84917 acatagaacagaggttactgcatctgagggcgaaatctgggcagctacttagcttctaca 84858 Query: 536 ttaagaattttgcagacaaagggacagctttctttatggatgtcctgcgctatgtggttt 595 | ||||| ||||| ||||| |||||||||||||| |||||||||||||||||||| || | Sbjct: 84857 tgaagaactttgccgacaaggggacagctttcttcatggatgtcctgcgctatgttgtct 84798 Query: 596 ctgacaaacctgaaggatcca 616 |||| |||||||| ||||||| Sbjct: 84797 ctgataaacctgagggatcca 84777 Score = 167 bits (84), Expect = 1e-37 Identities = 96/100 (96%) Strand = Plus / Minus Query: 210 gctgctgttcgggtatgcgatgccggcgttcgagtgcttcaagacggtggagacgcggcc 269 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| || Sbjct: 88743 gctgctgttcgggtacgcgatgccggcgttcgagtgcttcaagacggtggaggcgcgccc 88684 Query: 270 caacgacgcgcacatgctccgcttctggtgccagtactgg 309 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 88683 caacgacgcccacatgctccgcttctggtgccagtactgg 88644 Score = 115 bits (58), Expect = 4e-22 Identities = 64/66 (96%) Strand = Plus / Minus Query: 353 ggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtaccctaaaa 412 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 85167 ggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtatcccaaaa 85108 Query: 413 caaagg 418 |||||| Sbjct: 85107 caaagg 85102 Score = 81.8 bits (41), Expect = 5e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 644 gctggagccccttcgcgaccaaacgccggccaccgtctccgccgc 688 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 82812 gctggagccccttcgcgaccaaacgccggccaccgtcgccgccgc 82768 Score = 77.8 bits (39), Expect = 8e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 308 ggattattgtggccatggtgatagcctttgagagcgtcatctcatgg 354 ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 85309 ggattattgtggccatggtaatagcctttgagagcctcatctcatgg 85263