BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem106f16 (938 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY295345.1| Oryza sativa (japonica cultivar-group) C2H2-type ... 252 2e-63 emb|CT830415.1| Oryza sativa (indica cultivar-group) cDNA clone:... 202 2e-48 ref|NM_001056979.1| Oryza sativa (japonica cultivar-group) Os03g... 202 2e-48 gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genom... 202 2e-48 gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 202 2e-48 >gb|AY295345.1| Oryza sativa (japonica cultivar-group) C2H2-type zinc finger protein ZFP36 mRNA, complete cds Length = 799 Score = 252 bits (127), Expect = 2e-63 Identities = 230/265 (86%), Gaps = 12/265 (4%) Strand = Plus / Plus Query: 436 cgggagcaacgggccgcaccggtgcaccatctgcaggaggagcttcgcgacgggccaggc 495 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 503 cgggagcactgggccgcaccggtgcaccatctgcaggaggagcttcgcgacggggcaggc 562 Query: 496 gctcggtgggcacaagcgctgccactactgggacggcacgtcggtgtcggtgtccatgtc 555 |||||| || |||||||||||||||||||||||||||||||||||||| || ||| | || Sbjct: 563 gctcggcggccacaagcgctgccactactgggacggcacgtcggtgtccgtctccgtctc 622 Query: 556 ggcgtcggcgt---cagggtcgtcgtccgtgaggaacttcgacctgaacctgatgccggt 612 |||||| |||| | | |||||| |||| |||||||||||||| |||||||||||| | Sbjct: 623 ggcgtccgcgtcggccgcctcgtcggccgtcaggaacttcgacctcaacctgatgccgct 682 Query: 613 gccggagaaca---------ccggagtgaagaggtgggcggaggaggaggaggtgcagag 663 |||||||| || ||||| | |||||||||||||||||||||||||||||||| Sbjct: 683 gccggagagcacagccgccgccggaatcaagaggtgggcggaggaggaggaggtgcagag 742 Query: 664 cccactcccggccaagaagctcagg 688 ||||| |||| ||||||||||||| Sbjct: 743 tccactgccggtcaagaagctcagg 767 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 270 aggagctccgcttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcg 329 |||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||| Sbjct: 322 aggagctccgcttccggtgcaccgtctgcgggaaggccttcgcctcgtaccaggcgctcg 381 Query: 330 gcgggcacaagtccagccaccgcaaggcgcc 360 |||| ||||||||||||||||| ||| |||| Sbjct: 382 gcggacacaagtccagccaccggaagccgcc 412 >emb|CT830415.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104A19, full insert sequence Length = 1100 Score = 202 bits (102), Expect = 2e-48 Identities = 167/188 (88%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 436 cgggagcaacgggccgcaccggtgcaccatctgcaggaggagcttcgcgacgggccaggc 495 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 531 cgggagcactggcccgcaccggtgcaccatctgcaggaggagcttcgcgacggggcaggc 590 Query: 496 gctcggtgggcacaagcgctgccactactgggacggcacgtcggtgtcggtgtccatgtc 555 |||||| || |||||||||||||||||||||||||||||||||||||| || ||| | || Sbjct: 591 gctcggcggccacaagcgctgccactactgggacggcacgtcggtgtccgtctccgtctc 650 Query: 556 ggcgtcggcgt---cagggtcgtcgtccgtgaggaacttcgacctgaacctgatgccggt 612 |||||| |||| | | |||||| |||| |||||||||||||| |||||||||||| | Sbjct: 651 ggcgtccgcgtcggccgcctcgtcggccgtcaggaacttcgacctcaacctgatgccgct 710 Query: 613 gccggaga 620 |||||||| Sbjct: 711 gccggaga 718 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 270 aggagctccgcttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcg 329 |||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||| Sbjct: 350 aggagctccgcttccggtgcaccgtctgcgggaaggccttcgcctcgtaccaggcgctcg 409 Query: 330 gcgggcacaagtccagccaccgcaaggcgcc 360 |||| ||||||||||||||||| ||| |||| Sbjct: 410 gcggacacaagtccagccaccggaagccgcc 440 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 632 aagaggtgggcggaggaggaggaggtgcagagcccactcccggccaagaagctcagg 688 |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| Sbjct: 739 aagaggtgggcggaggaggaggaggtgcagagtccactgccggtcaagaagctcagg 795 >ref|NM_001056979.1| Oryza sativa (japonica cultivar-group) Os03g0437200 (Os03g0437200) mRNA, complete cds Length = 1097 Score = 202 bits (102), Expect = 2e-48 Identities = 167/188 (88%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 436 cgggagcaacgggccgcaccggtgcaccatctgcaggaggagcttcgcgacgggccaggc 495 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 527 cgggagcactggcccgcaccggtgcaccatctgcaggaggagcttcgcgacggggcaggc 586 Query: 496 gctcggtgggcacaagcgctgccactactgggacggcacgtcggtgtcggtgtccatgtc 555 |||||| || |||||||||||||||||||||||||||||||||||||| || ||| | || Sbjct: 587 gctcggcggccacaagcgctgccactactgggacggcacgtcggtgtccgtctccgtctc 646 Query: 556 ggcgtcggcgt---cagggtcgtcgtccgtgaggaacttcgacctgaacctgatgccggt 612 |||||| |||| | | |||||| |||| |||||||||||||| |||||||||||| | Sbjct: 647 ggcgtccgcgtcggccgcctcgtcggccgtcaggaacttcgacctcaacctgatgccgct 706 Query: 613 gccggaga 620 |||||||| Sbjct: 707 gccggaga 714 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Plus Query: 270 aggagctccgcttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcg 329 |||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||| Sbjct: 346 aggagctccgcttccggtgcaccgtctgcgggaaggccttcgcctcgtaccaggcgctcg 405 Query: 330 gcgggcacaagtccagccaccgcaaggcgcc 360 |||| ||||||||||||||||| ||| |||| Sbjct: 406 gcggacacaagtccagccaccggaagccgcc 436 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 632 aagaggtgggcggaggaggaggaggtgcagagcccactcccggccaagaagctcagg 688 |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| Sbjct: 735 aagaggtgggcggaggaggaggaggtgcagagtccactgccggtcaagaagctcagg 791 >gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence Length = 35334 Score = 202 bits (102), Expect = 2e-48 Identities = 167/188 (88%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 436 cgggagcaacgggccgcaccggtgcaccatctgcaggaggagcttcgcgacgggccaggc 495 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 32937 cgggagcactggcccgcaccggtgcaccatctgcaggaggagcttcgcgacggggcaggc 32878 Query: 496 gctcggtgggcacaagcgctgccactactgggacggcacgtcggtgtcggtgtccatgtc 555 |||||| || |||||||||||||||||||||||||||||||||||||| || ||| | || Sbjct: 32877 gctcggcggccacaagcgctgccactactgggacggcacgtcggtgtccgtctccgtctc 32818 Query: 556 ggcgtcggcgt---cagggtcgtcgtccgtgaggaacttcgacctgaacctgatgccggt 612 |||||| |||| | | |||||| |||| |||||||||||||| |||||||||||| | Sbjct: 32817 ggcgtccgcgtcggccgcctcgtcggccgtcaggaacttcgacctcaacctgatgccgct 32758 Query: 613 gccggaga 620 |||||||| Sbjct: 32757 gccggaga 32750 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 270 aggagctccgcttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcg 329 |||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||| Sbjct: 33118 aggagctccgcttccggtgcaccgtctgcgggaaggccttcgcctcgtaccaggcgctcg 33059 Query: 330 gcgggcacaagtccagccaccgcaaggcgcc 360 |||| ||||||||||||||||| ||| |||| Sbjct: 33058 gcggacacaagtccagccaccggaagccgcc 33028 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 281 ttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcggcgggcacaag 340 ||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 27348 ttccggtgctccgtctgcggcaaggccttcccgtcgcaccaagcgctcggcgggcacaag 27289 Query: 341 tccagccaccgcaaggcgcccacgg 365 |||||||||||||| |||| |||| Sbjct: 27288 gccagccaccgcaagccgccgacgg 27264 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 632 aagaggtgggcggaggaggaggaggtgcagagcccactcccggccaagaagctcagg 688 |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| Sbjct: 32729 aagaggtgggcggaggaggaggaggtgcagagtccactgccggtcaagaagctcagg 32673 >gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 202 bits (102), Expect = 2e-48 Identities = 167/188 (88%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 436 cgggagcaacgggccgcaccggtgcaccatctgcaggaggagcttcgcgacgggccaggc 495 |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14981 cgggagcactggcccgcaccggtgcaccatctgcaggaggagcttcgcgacggggcaggc 14922 Query: 496 gctcggtgggcacaagcgctgccactactgggacggcacgtcggtgtcggtgtccatgtc 555 |||||| || |||||||||||||||||||||||||||||||||||||| || ||| | || Sbjct: 14921 gctcggcggccacaagcgctgccactactgggacggcacgtcggtgtccgtctccgtctc 14862 Query: 556 ggcgtcggcgt---cagggtcgtcgtccgtgaggaacttcgacctgaacctgatgccggt 612 |||||| |||| | | |||||| |||| |||||||||||||| |||||||||||| | Sbjct: 14861 ggcgtccgcgtcggccgcctcgtcggccgtcaggaacttcgacctcaacctgatgccgct 14802 Query: 613 gccggaga 620 |||||||| Sbjct: 14801 gccggaga 14794 Score = 117 bits (59), Expect = 8e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 270 aggagctccgcttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcg 329 |||||||||||||||||||| | ||||||| |||||||||||| |||||||| ||||||| Sbjct: 15162 aggagctccgcttccggtgcaccgtctgcgggaaggccttcgcctcgtaccaggcgctcg 15103 Query: 330 gcgggcacaagtccagccaccgcaaggcgcc 360 |||| ||||||||||||||||| ||| |||| Sbjct: 15102 gcggacacaagtccagccaccggaagccgcc 15072 Score = 105 bits (53), Expect = 3e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 281 ttccggtgctctgtctgcgagaaggccttcgcgtcgtaccaagcgctcggcgggcacaag 340 ||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||| Sbjct: 9392 ttccggtgctccgtctgcggcaaggccttcccgtcgcaccaagcgctcggcgggcacaag 9333 Query: 341 tccagccaccgcaaggcgcccacgg 365 |||||||||||||| |||| |||| Sbjct: 9332 gccagccaccgcaagccgccgacgg 9308 Score = 89.7 bits (45), Expect = 2e-14 Identities = 54/57 (94%) Strand = Plus / Minus Query: 632 aagaggtgggcggaggaggaggaggtgcagagcccactcccggccaagaagctcagg 688 |||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| Sbjct: 14773 aagaggtgggcggaggaggaggaggtgcagagtccactgccggtcaagaagctcagg 14717