BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem106d19 (1298 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome... 252 3e-63 gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome... 252 3e-63 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 252 3e-63 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 228 4e-56 emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb... 228 4e-56 >gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 252 bits (127), Expect = 3e-63 Identities = 283/335 (84%) Strand = Plus / Plus Query: 329 ccacccagtcccattatgggaaagggaattttgcagttatgttggtgtcatttcttggca 388 ||||||| ||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 16215 ccacccaatcccattatgggaaagggaattttgcatttatgttggcggcatttcttggca 16274 Query: 389 aaggtttattgaaaacaagaaatttgttccaatgtataacaacatagaacaatgggatga 448 ||||| ||| ||||||| || ||| |||||||| |||||||| ||||||||||| Sbjct: 16275 caggttctgtgacaacaagagatatgtctgcatgtataagaacatagagcaatgggatga 16334 Query: 449 ttcaggagcctttgagaattttcagaacgcaaagacgagattctgggctaattatcatgg 508 |||| ||||||||| |||||| |||| |||||| | ||||||||||||||||| ||||| Sbjct: 16335 ctcagaagcctttgataattttaagaatgcaaaggctagattctgggctaattaccatgg 16394 Query: 509 tctaccttctgatatacctttacctgaccgtgatatgtacattgataaggtcgaccacca 568 || |||||| || ||| |||| || |||| ||||||||| ||||| ||||| |||||| | Sbjct: 16395 tcaaccttcagacatatctttgccagaccctgatatgtatattgacaaggttgaccacaa 16454 Query: 569 ttgtaaaatcgaccctgagttggtagctgacctggataaggaacgacaaccatttgagac 628 | | || ||||||||||||||| ||||||||||| ||| || ||| |||||| |||| Sbjct: 16455 tagcaagatcgaccctgagttgatagctgacctgaatatggtacggttaccattcgagat 16514 Query: 629 tgataatgagctactcccagctgctggattgggca 663 ||| ||||| |||||||||||| ||||||||||| Sbjct: 16515 ggatgatgagttactcccagctgatggattgggca 16549 Score = 117 bits (59), Expect = 1e-22 Identities = 143/171 (83%) Strand = Plus / Plus Query: 867 agtaacaaccattattcatcaaataacaggaatagcttctatggagtatccaacaataga 926 |||||||| ||| ||||||||||||||||| ||||||| |||| | || |||||| Sbjct: 16765 agtaacaatcatcattcatcaaataacagggctagcttcaatgggatcaacaggaataga 16824 Query: 927 taccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttccagcaa 986 |||||||| ||||||||||||||||| ||||||||||| ||||||| ||| | |||||| Sbjct: 16825 taccaggacccaagcagcatatctggaaggaaaaggaatagtggtgggtacattcagcaa 16884 Query: 987 agaaacggtaaacataggagccaagctgagggctaccaaagaagtagatgg 1037 |||||| ||| ||| || | ||| ||||||||||||| ||||||||||| Sbjct: 16885 agaaacagtagacagagaaaccagattgagggctaccaaggaagtagatgg 16935 >gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 252 bits (127), Expect = 3e-63 Identities = 283/335 (84%) Strand = Plus / Plus Query: 329 ccacccagtcccattatgggaaagggaattttgcagttatgttggtgtcatttcttggca 388 ||||||| ||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 102389 ccacccaatcccattatgggaaagggaattttgcatttatgttggcggcatttcttggca 102448 Query: 389 aaggtttattgaaaacaagaaatttgttccaatgtataacaacatagaacaatgggatga 448 ||||| ||| ||||||| || ||| |||||||| |||||||| ||||||||||| Sbjct: 102449 caggttctgtgacaacaagagatatgtctgcatgtataagaacatagagcaatgggatga 102508 Query: 449 ttcaggagcctttgagaattttcagaacgcaaagacgagattctgggctaattatcatgg 508 |||| ||||||||| |||||| |||| |||||| | ||||||||||||||||| ||||| Sbjct: 102509 ctcagaagcctttgataattttaagaatgcaaaggctagattctgggctaattaccatgg 102568 Query: 509 tctaccttctgatatacctttacctgaccgtgatatgtacattgataaggtcgaccacca 568 || |||||| || ||| |||| || |||| ||||||||| ||||| ||||| |||||| | Sbjct: 102569 tcaaccttcagacatatctttgccagaccctgatatgtatattgacaaggttgaccacaa 102628 Query: 569 ttgtaaaatcgaccctgagttggtagctgacctggataaggaacgacaaccatttgagac 628 | | || ||||||||||||||| ||||||||||| ||| || ||| |||||| |||| Sbjct: 102629 tagcaagatcgaccctgagttgatagctgacctgaatatggtacggttaccattcgagat 102688 Query: 629 tgataatgagctactcccagctgctggattgggca 663 ||| ||||| |||||||||||| ||||||||||| Sbjct: 102689 ggatgatgagttactcccagctgatggattgggca 102723 Score = 117 bits (59), Expect = 1e-22 Identities = 143/171 (83%) Strand = Plus / Plus Query: 867 agtaacaaccattattcatcaaataacaggaatagcttctatggagtatccaacaataga 926 |||||||| ||| ||||||||||||||||| ||||||| |||| | || |||||| Sbjct: 102939 agtaacaatcatcattcatcaaataacagggctagcttcaatgggatcaacaggaataga 102998 Query: 927 taccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttccagcaa 986 |||||||| ||||||||||||||||| ||||||||||| ||||||| ||| | |||||| Sbjct: 102999 taccaggacccaagcagcatatctggaaggaaaaggaatagtggtgggtacattcagcaa 103058 Query: 987 agaaacggtaaacataggagccaagctgagggctaccaaagaagtagatgg 1037 |||||| ||| ||| || | ||| ||||||||||||| ||||||||||| Sbjct: 103059 agaaacagtagacagagaaaccagattgagggctaccaaggaagtagatgg 103109 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 252 bits (127), Expect = 3e-63 Identities = 283/335 (84%) Strand = Plus / Plus Query: 329 ccacccagtcccattatgggaaagggaattttgcagttatgttggtgtcatttcttggca 388 ||||||| ||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 1884559 ccacccaatcccattatgggaaagggaattttgcatttatgttggcggcatttcttggca 1884618 Query: 389 aaggtttattgaaaacaagaaatttgttccaatgtataacaacatagaacaatgggatga 448 ||||| ||| ||||||| || ||| |||||||| |||||||| ||||||||||| Sbjct: 1884619 caggttctgtgacaacaagagatatgtctgcatgtataagaacatagagcaatgggatga 1884678 Query: 449 ttcaggagcctttgagaattttcagaacgcaaagacgagattctgggctaattatcatgg 508 |||| ||||||||| |||||| |||| |||||| | ||||||||||||||||| ||||| Sbjct: 1884679 ctcagaagcctttgataattttaagaatgcaaaggctagattctgggctaattaccatgg 1884738 Query: 509 tctaccttctgatatacctttacctgaccgtgatatgtacattgataaggtcgaccacca 568 || |||||| || ||| |||| || |||| ||||||||| ||||| ||||| |||||| | Sbjct: 1884739 tcaaccttcagacatatctttgccagaccctgatatgtatattgacaaggttgaccacaa 1884798 Query: 569 ttgtaaaatcgaccctgagttggtagctgacctggataaggaacgacaaccatttgagac 628 | | || ||||||||||||||| ||||||||||| ||| || ||| |||||| |||| Sbjct: 1884799 tagcaagatcgaccctgagttgatagctgacctgaatatggtacggttaccattcgagat 1884858 Query: 629 tgataatgagctactcccagctgctggattgggca 663 ||| ||||| |||||||||||| ||||||||||| Sbjct: 1884859 ggatgatgagttactcccagctgatggattgggca 1884893 Score = 117 bits (59), Expect = 1e-22 Identities = 143/171 (83%) Strand = Plus / Plus Query: 867 agtaacaaccattattcatcaaataacaggaatagcttctatggagtatccaacaataga 926 |||||||| ||| ||||||||||||||||| ||||||| |||| | || |||||| Sbjct: 1885109 agtaacaatcatcattcatcaaataacagggctagcttcaatgggatcaacaggaataga 1885168 Query: 927 taccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttccagcaa 986 |||||||| ||||||||||||||||| ||||||||||| ||||||| ||| | |||||| Sbjct: 1885169 taccaggacccaagcagcatatctggaaggaaaaggaatagtggtgggtacattcagcaa 1885228 Query: 987 agaaacggtaaacataggagccaagctgagggctaccaaagaagtagatgg 1037 |||||| ||| ||| || | ||| ||||||||||||| ||||||||||| Sbjct: 1885229 agaaacagtagacagagaaaccagattgagggctaccaaggaagtagatgg 1885279 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 228 bits (115), Expect = 4e-56 Identities = 280/335 (83%) Strand = Plus / Plus Query: 329 ccacccagtcccattatgggaaagggaattttgcagttatgttggtgtcatttcttggca 388 ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 1814083 ccacccagtcccattatgggaaagggaattttgcatttatgttggcggcatttcttggca 1814142 Query: 389 aaggtttattgaaaacaagaaatttgttccaatgtataacaacatagaacaatgggatga 448 ||||| ||| ||||||| || ||| |||||||| ||||| || ||||||||||| Sbjct: 1814143 caggttctgtgacaacaagagatatgtctgcatgtataagaacattgagcaatgggatga 1814202 Query: 449 ttcaggagcctttgagaattttcagaacgcaaagacgagattctgggctaattatcatgg 508 |||| ||||||||| |||||| |||| |||||| | ||||||||||||||||| ||||| Sbjct: 1814203 ctcagaagcctttgataattttaagaatgcaaaggctagattctgggctaattaccatgg 1814262 Query: 509 tctaccttctgatatacctttacctgaccgtgatatgtacattgataaggtcgaccacca 568 | |||||| || ||| |||| || |||| ||||||||| ||||| ||| | |||||| | Sbjct: 1814263 ccaaccttcagacatatctttgccagaccctgatatgtatattgacaagattgaccacaa 1814322 Query: 569 ttgtaaaatcgaccctgagttggtagctgacctggataaggaacgacaaccatttgagac 628 | | || ||||||||||||||| ||||||||||| | | || ||| |||||| |||| Sbjct: 1814323 tagcaagatcgaccctgagttgatagctgacctgaagatggtacgcttaccattcgagag 1814382 Query: 629 tgataatgagctactcccagctgctggattgggca 663 ||| ||||| |||||||||||| ||||||||||| Sbjct: 1814383 ggatgatgagttactcccagctgatggattgggca 1814417 Score = 115 bits (58), Expect = 5e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 867 agtaacaaccattattcatcaaataacaggaatagcttctatggagtatccaacaataga 926 |||||||| ||| ||||||||||||||||| |||||||| |||| || || |||||| Sbjct: 1814651 agtaacaatcatcattcatcaaataacagggatagcttcaatggggtcaacaggaataga 1814710 Query: 927 taccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttccagcaa 986 |||||||| |||| |||||||||||| ||||||||||| ||||||| || | |||||| Sbjct: 1814711 taccaggacccaaacagcatatctggaaggaaaaggaatagtggtgggcacattcagcaa 1814770 Query: 987 agaaacggtaaacataggagccaagctgagggctaccaaagaagta 1032 |||||| ||| ||| || | ||| |||||||||||||| |||||| Sbjct: 1814771 agaaacagtagacagagaaaccagactgagggctaccaaggaagta 1814816 Score = 87.7 bits (44), Expect = 1e-13 Identities = 119/144 (82%) Strand = Plus / Plus Query: 690 cagaaccagtctgaaaactgggacacctatatagaaaagccagctgaagtcaataagtgg 749 |||||||| |||| ||||||||||| |||| |||||||||| ||||||| || |||||| Sbjct: 1814450 cagaaccaatctggaaactgggacatctatgtagaaaagcccactgaagttaacaagtgg 1814509 Query: 750 gaggacaattcaagatccaactcgagttggggaatgaagcatgatcctttcaataaatgg 809 ||| | |||||||||||||| | ||||||| |||||||| ||| ||| ||||| Sbjct: 1814510 gagcaagattcaagatccaacatggactggggaacaaagcatgaatcttggaatgaatgg 1814569 Query: 810 ggtaaagattgctctggttggggt 833 ||||| ||||||||||||||||| Sbjct: 1814570 agtaaaaattgctctggttggggt 1814593 Score = 87.7 bits (44), Expect = 1e-13 Identities = 95/112 (84%) Strand = Plus / Plus Query: 921 aatagataccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttc 980 |||||||||||||| |||| |||||||||||| ||||||||||| ||||||| || | Sbjct: 1814987 aatagataccaggacccaaacagcatatctggaaggaaaaggaatagtggtgggcacatt 1815046 Query: 981 cagcaaagaaacggtaaacataggagccaagctgagggctaccaaagaagta 1032 |||||||||||| ||| ||| || | ||| |||||||||||||| |||||| Sbjct: 1815047 cagcaaagaaacagtagacagagaaaccagactgagggctaccaaggaagta 1815098 >emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 228 bits (115), Expect = 4e-56 Identities = 280/335 (83%) Strand = Plus / Plus Query: 329 ccacccagtcccattatgggaaagggaattttgcagttatgttggtgtcatttcttggca 388 ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 8801 ccacccagtcccattatgggaaagggaattttgcatttatgttggcggcatttcttggca 8860 Query: 389 aaggtttattgaaaacaagaaatttgttccaatgtataacaacatagaacaatgggatga 448 ||||| ||| ||||||| || ||| |||||||| ||||| || ||||||||||| Sbjct: 8861 caggttctgtgacaacaagagatatgtctgcatgtataagaacattgagcaatgggatga 8920 Query: 449 ttcaggagcctttgagaattttcagaacgcaaagacgagattctgggctaattatcatgg 508 |||| ||||||||| |||||| |||| |||||| | ||||||||||||||||| ||||| Sbjct: 8921 ctcagaagcctttgataattttaagaatgcaaaggctagattctgggctaattaccatgg 8980 Query: 509 tctaccttctgatatacctttacctgaccgtgatatgtacattgataaggtcgaccacca 568 | |||||| || ||| |||| || |||| ||||||||| ||||| ||| | |||||| | Sbjct: 8981 ccaaccttcagacatatctttgccagaccctgatatgtatattgacaagattgaccacaa 9040 Query: 569 ttgtaaaatcgaccctgagttggtagctgacctggataaggaacgacaaccatttgagac 628 | | || ||||||||||||||| ||||||||||| | | || ||| |||||| |||| Sbjct: 9041 tagcaagatcgaccctgagttgatagctgacctgaagatggtacgcttaccattcgagag 9100 Query: 629 tgataatgagctactcccagctgctggattgggca 663 ||| ||||| |||||||||||| ||||||||||| Sbjct: 9101 ggatgatgagttactcccagctgatggattgggca 9135 Score = 115 bits (58), Expect = 5e-22 Identities = 139/166 (83%) Strand = Plus / Plus Query: 867 agtaacaaccattattcatcaaataacaggaatagcttctatggagtatccaacaataga 926 |||||||| ||| ||||||||||||||||| |||||||| |||| || || |||||| Sbjct: 9369 agtaacaatcatcattcatcaaataacagggatagcttcaatggggtcaacaggaataga 9428 Query: 927 taccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttccagcaa 986 |||||||| |||| |||||||||||| ||||||||||| ||||||| || | |||||| Sbjct: 9429 taccaggacccaaacagcatatctggaaggaaaaggaatagtggtgggcacattcagcaa 9488 Query: 987 agaaacggtaaacataggagccaagctgagggctaccaaagaagta 1032 |||||| ||| ||| || | ||| |||||||||||||| |||||| Sbjct: 9489 agaaacagtagacagagaaaccagactgagggctaccaaggaagta 9534 Score = 87.7 bits (44), Expect = 1e-13 Identities = 119/144 (82%) Strand = Plus / Plus Query: 690 cagaaccagtctgaaaactgggacacctatatagaaaagccagctgaagtcaataagtgg 749 |||||||| |||| ||||||||||| |||| |||||||||| ||||||| || |||||| Sbjct: 9168 cagaaccaatctggaaactgggacatctatgtagaaaagcccactgaagttaacaagtgg 9227 Query: 750 gaggacaattcaagatccaactcgagttggggaatgaagcatgatcctttcaataaatgg 809 ||| | |||||||||||||| | ||||||| |||||||| ||| ||| ||||| Sbjct: 9228 gagcaagattcaagatccaacatggactggggaacaaagcatgaatcttggaatgaatgg 9287 Query: 810 ggtaaagattgctctggttggggt 833 ||||| ||||||||||||||||| Sbjct: 9288 agtaaaaattgctctggttggggt 9311 Score = 87.7 bits (44), Expect = 1e-13 Identities = 95/112 (84%) Strand = Plus / Plus Query: 921 aatagataccaggatccaagcagcatatctggcaggaaaaggaaccgtggtggatacttc 980 |||||||||||||| |||| |||||||||||| ||||||||||| ||||||| || | Sbjct: 9705 aatagataccaggacccaaacagcatatctggaaggaaaaggaatagtggtgggcacatt 9764 Query: 981 cagcaaagaaacggtaaacataggagccaagctgagggctaccaaagaagta 1032 |||||||||||| ||| ||| || | ||| |||||||||||||| |||||| Sbjct: 9765 cagcaaagaaacagtagacagagaaaccagactgagggctaccaaggaagta 9816