BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem104j09 (1119 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060723.1| Oryza sativa (japonica cultivar-group) Os04g... 236 2e-58 dbj|AK103595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 2e-58 emb|CR855038.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 184 5e-43 emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 184 5e-43 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 184 5e-43 >ref|NM_001060723.1| Oryza sativa (japonica cultivar-group) Os04g0667500 (Os04g0667500) mRNA, complete cds Length = 1229 Score = 236 bits (119), Expect = 2e-58 Identities = 170/187 (90%) Strand = Plus / Plus Query: 44 ctcctccggtgagaggtggccgccgctggagtccagccccgacgtcttcaaccagttaat 103 |||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| | || Sbjct: 99 ctcccccggcgagagatggccgccgctcgagtcgagccccgacgtattcaaccagctcat 158 Query: 104 gtggtcgctgggcgtcccggaggacgaggcggagttccacgacgtgtacgggttcgacgc 163 |||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| Sbjct: 159 gtggtcgctgggtgtcccggaggacgtggcggagttccacgacgtgtacagcctcgacgc 218 Query: 164 cgacgcgctggagatggtgccccagactgtgctcgccgtcatcttctgcttccccgatcc 223 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 219 cgatgcgctggagatggtgccccagcctgtgctcgccgtcgtcttctgcttccccgatcc 278 Query: 224 accccag 230 | ||||| Sbjct: 279 aacccag 285 Score = 172 bits (87), Expect = 2e-39 Identities = 189/223 (84%) Strand = Plus / Plus Query: 296 tttcataaaacagattgaatcattaggaaatgcttgtggaactatcgctctacttcatgc 355 |||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 297 tttcataaaacaaattgaatcactaggaaatgcttgtggaactattgcgctacttcatgc 356 Query: 356 tgttggaaacacattttcagaattcagtttattggagaattcatgcttggacatgttctt 415 ||||||||| ||| ||||||| ||||||| | ||||||||| | |||||||||||| | Sbjct: 357 tgttggaaatgcatattcagaaatcagtttgtcggagaattctttcttggacatgtttat 416 Query: 416 caaatcaacagccagcatggacccgtacaagcgtgccatatttcttgaaaagaacaatga 475 |||||||||| | ||||| | ||| ||||||| | |||||||| ||| | |||| Sbjct: 417 caaatcaacatctggcatgacttcatacgagcgtgctgtgtttcttgagaaggatgatga 476 Query: 476 catggcaagagctcactcattggctgcccgtgctggtgacaca 518 ||||||||||||||||| || ||||||| |||| ||||||||| Sbjct: 477 catggcaagagctcacttatcggctgccagtgccggtgacaca 519 Score = 170 bits (86), Expect = 8e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 608 atggaacactttatgagcttgatggaatgaagcatggaccaataaagcatggctcctcat 667 |||||||||| |||||||||||||| ||||||| |||||||||||| |||||| | |||| Sbjct: 569 atggaacactctatgagcttgatggtatgaagcctggaccaataaatcatggcccatcat 628 Query: 668 ctgctaaaagtttactgcaggatgctgtgcatatcattaaggccataatgcacgacattc 727 | ||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 629 cctctaaaagcttactgcaggatgctgtgaatatcattaaggccaccatgcacaacattc 688 Query: 728 ccaattcgattaacttcaatgtcatggtactatcaagaaaagcaaagtaa 777 |||| ||| | |||||||| || || || ||||||||||||||| ||||| Sbjct: 689 ccaactcggtgaacttcaacgtaatagtgctatcaagaaaagcagagtaa 738 >dbj|AK103595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133D22, full insert sequence Length = 2383 Score = 236 bits (119), Expect = 2e-58 Identities = 170/187 (90%) Strand = Plus / Plus Query: 44 ctcctccggtgagaggtggccgccgctggagtccagccccgacgtcttcaaccagttaat 103 |||| |||| ||||| ||||||||||| ||||| ||||||||||| ||||||||| | || Sbjct: 102 ctcccccggcgagagatggccgccgctcgagtcgagccccgacgtattcaaccagctcat 161 Query: 104 gtggtcgctgggcgtcccggaggacgaggcggagttccacgacgtgtacgggttcgacgc 163 |||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| Sbjct: 162 gtggtcgctgggtgtcccggaggacgtggcggagttccacgacgtgtacagcctcgacgc 221 Query: 164 cgacgcgctggagatggtgccccagactgtgctcgccgtcatcttctgcttccccgatcc 223 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 222 cgatgcgctggagatggtgccccagcctgtgctcgccgtcgtcttctgcttccccgatcc 281 Query: 224 accccag 230 | ||||| Sbjct: 282 aacccag 288 Score = 172 bits (87), Expect = 2e-39 Identities = 189/223 (84%) Strand = Plus / Plus Query: 296 tttcataaaacagattgaatcattaggaaatgcttgtggaactatcgctctacttcatgc 355 |||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 1451 tttcataaaacaaattgaatcactaggaaatgcttgtggaactattgcgctacttcatgc 1510 Query: 356 tgttggaaacacattttcagaattcagtttattggagaattcatgcttggacatgttctt 415 ||||||||| ||| ||||||| ||||||| | ||||||||| | |||||||||||| | Sbjct: 1511 tgttggaaatgcatattcagaaatcagtttgtcggagaattctttcttggacatgtttat 1570 Query: 416 caaatcaacagccagcatggacccgtacaagcgtgccatatttcttgaaaagaacaatga 475 |||||||||| | ||||| | ||| ||||||| | |||||||| ||| | |||| Sbjct: 1571 caaatcaacatctggcatgacttcatacgagcgtgctgtgtttcttgagaaggatgatga 1630 Query: 476 catggcaagagctcactcattggctgcccgtgctggtgacaca 518 ||||||||||||||||| || ||||||| |||| ||||||||| Sbjct: 1631 catggcaagagctcacttatcggctgccagtgccggtgacaca 1673 Score = 170 bits (86), Expect = 8e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 608 atggaacactttatgagcttgatggaatgaagcatggaccaataaagcatggctcctcat 667 |||||||||| |||||||||||||| ||||||| |||||||||||| |||||| | |||| Sbjct: 1723 atggaacactctatgagcttgatggtatgaagcctggaccaataaatcatggcccatcat 1782 Query: 668 ctgctaaaagtttactgcaggatgctgtgcatatcattaaggccataatgcacgacattc 727 | ||||||| |||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 1783 cctctaaaagcttactgcaggatgctgtgaatatcattaaggccaccatgcacaacattc 1842 Query: 728 ccaattcgattaacttcaatgtcatggtactatcaagaaaagcaaagtaa 777 |||| ||| | |||||||| || || || ||||||||||||||| ||||| Sbjct: 1843 ccaactcggtgaacttcaacgtaatagtgctatcaagaaaagcagagtaa 1892 >emb|CR855038.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H1005F08, complete sequence Length = 198101 Score = 184 bits (93), Expect = 5e-43 Identities = 120/129 (93%) Strand = Plus / Minus Query: 102 atgtggtcgctgggcgtcccggaggacgaggcggagttccacgacgtgtacgggttcgac 161 |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||| Sbjct: 176803 atgtggtcgctgggtgtcccggaggacgtggcggagttccacgacgtgtacagcctcgac 176744 Query: 162 gccgacgcgctggagatggtgccccagactgtgctcgccgtcatcttctgcttccccgat 221 ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 176743 gccgatgcgctggagatggtgccccagcctgtgctcgccgtcgtcttctgcttccccgat 176684 Query: 222 ccaccccag 230 ||| ||||| Sbjct: 176683 ccaacccag 176675 Score = 115 bits (58), Expect = 4e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 296 tttcataaaacagattgaatcattaggaaatgcttgtggaactatcgctctacttcatgc 355 |||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 175510 tttcataaaacaaattgaatcactaggaaatgcttgtggaactattgcgctacttcatgc 175451 Query: 356 tgttggaaacacattttcagaattcagttt 385 ||||||||| ||| ||||||| ||||||| Sbjct: 175450 tgttggaaatgcatattcagaaatcagttt 175421 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 686 aggatgctgtgcatatcattaaggccataatgcacgacattcccaattcgattaacttca 745 ||||||||||| ||||||||||||||| |||||| |||||||||| ||| | ||||||| Sbjct: 174236 aggatgctgtgaatatcattaaggccaccatgcacaacattcccaactcggtgaacttca 174177 Query: 746 atgtcatggtactatcaagaaaagcaaagtaa 777 | || || || ||||||||||||||| ||||| Sbjct: 174176 acgtaatagtgctatcaagaaaagcagagtaa 174145 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 610 ggaacactttatgagcttgatggaatgaagcatggaccaataaagcatggctcctcatct 669 |||||||| |||||||||||||| ||||||| |||||||||||| |||||| | ||||| Sbjct: 174520 ggaacactctatgagcttgatggtatgaagcctggaccaataaatcatggcccatcatcc 174461 Query: 670 gctaaaagtttactgcagg 688 ||||||| |||||||||| Sbjct: 174460 tctaaaagcttactgcagg 174442 >emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 184 bits (93), Expect = 5e-43 Identities = 120/129 (93%) Strand = Plus / Minus Query: 102 atgtggtcgctgggcgtcccggaggacgaggcggagttccacgacgtgtacgggttcgac 161 |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||| Sbjct: 27897 atgtggtcgctgggtgtcccggaggacgtggcggagttccacgacgtgtacagcctcgac 27838 Query: 162 gccgacgcgctggagatggtgccccagactgtgctcgccgtcatcttctgcttccccgat 221 ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 27837 gccgatgcgctggagatggtgccccagcctgtgctcgccgtcgtcttctgcttccccgat 27778 Query: 222 ccaccccag 230 ||| ||||| Sbjct: 27777 ccaacccag 27769 Score = 115 bits (58), Expect = 4e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 296 tttcataaaacagattgaatcattaggaaatgcttgtggaactatcgctctacttcatgc 355 |||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 26604 tttcataaaacaaattgaatcactaggaaatgcttgtggaactattgcgctacttcatgc 26545 Query: 356 tgttggaaacacattttcagaattcagttt 385 ||||||||| ||| ||||||| ||||||| Sbjct: 26544 tgttggaaatgcatattcagaaatcagttt 26515 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 686 aggatgctgtgcatatcattaaggccataatgcacgacattcccaattcgattaacttca 745 ||||||||||| ||||||||||||||| |||||| |||||||||| ||| | ||||||| Sbjct: 25330 aggatgctgtgaatatcattaaggccaccatgcacaacattcccaactcggtgaacttca 25271 Query: 746 atgtcatggtactatcaagaaaagcaaagtaa 777 | || || || ||||||||||||||| ||||| Sbjct: 25270 acgtaatagtgctatcaagaaaagcagagtaa 25239 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 610 ggaacactttatgagcttgatggaatgaagcatggaccaataaagcatggctcctcatct 669 |||||||| |||||||||||||| ||||||| |||||||||||| |||||| | ||||| Sbjct: 25614 ggaacactctatgagcttgatggtatgaagcctggaccaataaatcatggcccatcatcc 25555 Query: 670 gctaaaagtttactgcagg 688 ||||||| |||||||||| Sbjct: 25554 tctaaaagcttactgcagg 25536 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 184 bits (93), Expect = 5e-43 Identities = 120/129 (93%) Strand = Plus / Minus Query: 102 atgtggtcgctgggcgtcccggaggacgaggcggagttccacgacgtgtacgggttcgac 161 |||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||| Sbjct: 34110836 atgtggtcgctgggtgtcccggaggacgtggcggagttccacgacgtgtacagcctcgac 34110777 Query: 162 gccgacgcgctggagatggtgccccagactgtgctcgccgtcatcttctgcttccccgat 221 ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 34110776 gccgatgcgctggagatggtgccccagcctgtgctcgccgtcgtcttctgcttccccgat 34110717 Query: 222 ccaccccag 230 ||| ||||| Sbjct: 34110716 ccaacccag 34110708 Score = 115 bits (58), Expect = 4e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 296 tttcataaaacagattgaatcattaggaaatgcttgtggaactatcgctctacttcatgc 355 |||||||||||| ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 34109543 tttcataaaacaaattgaatcactaggaaatgcttgtggaactattgcgctacttcatgc 34109484 Query: 356 tgttggaaacacattttcagaattcagttt 385 ||||||||| ||| ||||||| ||||||| Sbjct: 34109483 tgttggaaatgcatattcagaaatcagttt 34109454 Score = 87.7 bits (44), Expect = 9e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 686 aggatgctgtgcatatcattaaggccataatgcacgacattcccaattcgattaacttca 745 ||||||||||| ||||||||||||||| |||||| |||||||||| ||| | ||||||| Sbjct: 34108268 aggatgctgtgaatatcattaaggccaccatgcacaacattcccaactcggtgaacttca 34108209 Query: 746 atgtcatggtactatcaagaaaagcaaagtaa 777 | || || || ||||||||||||||| ||||| Sbjct: 34108208 acgtaatagtgctatcaagaaaagcagagtaa 34108177 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 610 ggaacactttatgagcttgatggaatgaagcatggaccaataaagcatggctcctcatct 669 |||||||| |||||||||||||| ||||||| |||||||||||| |||||| | ||||| Sbjct: 34108552 ggaacactctatgagcttgatggtatgaagcctggaccaataaatcatggcccatcatcc 34108493 Query: 670 gctaaaagtttactgcagg 688 ||||||| |||||||||| Sbjct: 34108492 tctaaaagcttactgcagg 34108474