BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem104i21 (1026 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT836498.1| Oryza sativa (indica cultivar-group) cDNA clone:... 363 9e-97 emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 311 3e-81 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 311 3e-81 emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 311 3e-81 gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome... 240 9e-60 >emb|CT836498.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011J15, full insert sequence Length = 845 Score = 363 bits (183), Expect = 9e-97 Identities = 284/318 (89%), Gaps = 6/318 (1%) Strand = Plus / Plus Query: 348 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 343 Query: 408 ggtggagctgcggctgctcgtgctgagggacacgctcgaggagcagggctacacggaggg 467 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 344 ggtggagctgcggctgctcctgctgagggacgcgctcgaggagcaggggtacacggaggg 403 Query: 468 cgagatcgaggagcgcgtcgaggaggcgcgcaaggaagccgagatcgaggcggctgccgc 527 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || || Sbjct: 404 ggagatcgaggagcgcgtcgaggaggcgcgcaaggaggccgagatcgaggccgcggcggc 463 Query: 528 tgcggtcgcggaggaggaaggctgcgtcagcggcggggggcgaccaccactcccgggcaa 587 |||| ||| ||||||||||| |||||| |||||| | |||||||||||||| Sbjct: 464 cgcggccgccgaggaggaagg------acgcggcgcggggcggcagccactcccgggcaa 517 Query: 588 agggtttacggacacaaagagccaccacatcgcggcacggaaggagaagcaggttgagac 647 ||| ||| | |||||| | ||||||||| | || ||| |||||||||||||| ||||||| Sbjct: 518 aggtttttcagacacacaaagccaccacgttgctgcaaggaaggagaagcagcttgagac 577 Query: 648 tctgagggctgctcttgg 665 ||||||||||||||||| Sbjct: 578 gctgagggctgctcttgg 595 Score = 111 bits (56), Expect = 6e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 192 cgccgccgccatgtacaacggcatcgggctgcagacccagcgggggtccggcacgaatgg 251 ||||||||||||||||||||||||||| || |||||| ||||||||| ||||||||||| Sbjct: 125 cgccgccgccatgtacaacggcatcggtctccagaccgcgcgggggtcgggcacgaatgg 184 Query: 252 gcacatccagacgaacaagttcttcgtcaagccctggtcctcggcggtcggcgggccccc 311 | || | ||||| |||||||||||| ||||||| |||| ||| ||| ||||||||||| Sbjct: 185 gtacgtgcagaccaacaagttcttcatcaagccgcggtcgtcgtcggcgggcgggccccc 244 >emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 311 bits (157), Expect = 3e-81 Identities = 190/201 (94%) Strand = Plus / Plus Query: 348 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53513 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 53572 Query: 408 ggtggagctgcggctgctcgtgctgagggacacgctcgaggagcagggctacacggaggg 467 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 53573 ggtggagctgcggctgctcctgctgagggacgcgctcgaggagcaggggtacacggaggg 53632 Query: 468 cgagatcgaggagcgcgtcgaggaggcgcgcaaggaagccgagatcgaggcggctgccgc 527 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || || Sbjct: 53633 ggagatcgaggagcgcgtcgaggaggcgcgcaaggaggccgagatcgaggccgcggcggc 53692 Query: 528 tgcggtcgcggaggaggaagg 548 |||| ||| ||||||||||| Sbjct: 53693 cgcggccgccgaggaggaagg 53713 Score = 111 bits (56), Expect = 6e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 192 cgccgccgccatgtacaacggcatcgggctgcagacccagcgggggtccggcacgaatgg 251 ||||||||||||||||||||||||||| || |||||| ||||||||| ||||||||||| Sbjct: 53354 cgccgccgccatgtacaacggcatcggtctccagaccgcgcgggggtcgggcacgaatgg 53413 Query: 252 gcacatccagacgaacaagttcttcgtcaagccctggtcctcggcggtcggcgggccccc 311 | || | ||||| |||||||||||| ||||||| |||| ||| ||| ||||||||||| Sbjct: 53414 gtacgtgcagaccaacaagttcttcatcaagccgcggtcgtcgtcggcgggcgggccccc 53473 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 311 bits (157), Expect = 3e-81 Identities = 190/201 (94%) Strand = Plus / Plus Query: 348 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30876935 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 30876994 Query: 408 ggtggagctgcggctgctcgtgctgagggacacgctcgaggagcagggctacacggaggg 467 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 30876995 ggtggagctgcggctgctcctgctgagggacgcgctcgaggagcaggggtacacggaggg 30877054 Query: 468 cgagatcgaggagcgcgtcgaggaggcgcgcaaggaagccgagatcgaggcggctgccgc 527 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || || Sbjct: 30877055 ggagatcgaggagcgcgtcgaggaggcgcgcaaggaggccgagatcgaggccgcggcggc 30877114 Query: 528 tgcggtcgcggaggaggaagg 548 |||| ||| ||||||||||| Sbjct: 30877115 cgcggccgccgaggaggaagg 30877135 Score = 97.6 bits (49), Expect = 9e-17 Identities = 104/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 192 cgccgccgccatgtacaacggcatcggg-ctgcagacccagcgggggtccggcacgaatg 250 ||||||||||||||||||||||||| || || |||||| ||||||||| |||||||||| Sbjct: 30876775 cgccgccgccatgtacaacggcatcaggtctccagaccgcgcgggggtcgggcacgaatg 30876834 Query: 251 ggcacatccagacgaacaagttcttcgtcaagccctggtcctcggcggtcggcgggcccc 310 || || | ||||| |||||||||||| ||||||| |||| ||| ||| |||||||||| Sbjct: 30876835 ggtacgtgcagaccaacaagttcttcatcaagccgcggtcgtcgtcggcgggcgggcccc 30876894 Query: 311 c 311 | Sbjct: 30876895 c 30876895 >emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 311 bits (157), Expect = 3e-81 Identities = 190/201 (94%) Strand = Plus / Plus Query: 348 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144456 gggcctcggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggca 144515 Query: 408 ggtggagctgcggctgctcgtgctgagggacacgctcgaggagcagggctacacggaggg 467 ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 144516 ggtggagctgcggctgctcctgctgagggacgcgctcgaggagcaggggtacacggaggg 144575 Query: 468 cgagatcgaggagcgcgtcgaggaggcgcgcaaggaagccgagatcgaggcggctgccgc 527 ||||||||||||||||||||||||||||||||||| |||||||||||||| || || || Sbjct: 144576 ggagatcgaggagcgcgtcgaggaggcgcgcaaggaggccgagatcgaggccgcggcggc 144635 Query: 528 tgcggtcgcggaggaggaagg 548 |||| ||| ||||||||||| Sbjct: 144636 cgcggccgccgaggaggaagg 144656 Score = 97.6 bits (49), Expect = 9e-17 Identities = 104/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 192 cgccgccgccatgtacaacggcatcggg-ctgcagacccagcgggggtccggcacgaatg 250 ||||||||||||||||||||||||| || || |||||| ||||||||| |||||||||| Sbjct: 144296 cgccgccgccatgtacaacggcatcaggtctccagaccgcgcgggggtcgggcacgaatg 144355 Query: 251 ggcacatccagacgaacaagttcttcgtcaagccctggtcctcggcggtcggcgggcccc 310 || || | ||||| |||||||||||| ||||||| |||| ||| ||| |||||||||| Sbjct: 144356 ggtacgtgcagaccaacaagttcttcatcaagccgcggtcgtcgtcggcgggcgggcccc 144415 Query: 311 c 311 | Sbjct: 144416 c 144416 >gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 240 bits (121), Expect = 9e-60 Identities = 148/157 (94%) Strand = Plus / Minus Query: 354 cggcgggatgcggaagccgaacaaggagatcctggagcacgaccggaagcggcaggtgga 413 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 98521 cggcgggatgcggaagccgagcaaggagatcctggagcacgaccggaagcggcaggtgga 98462 Query: 414 gctgcggctgctcgtgctgagggacacgctcgaggagcagggctacacggagggcgagat 473 ||||||||||||| ||||||||||| ||||||||||||| || ||||||||||| ||| | Sbjct: 98461 gctgcggctgctcctgctgagggacgcgctcgaggagcaagggtacacggagggggaggt 98402 Query: 474 cgaggagcgcgtcgaggaggcgcgcaaggaagccgag 510 |||||||||||||||| ||||||||||||| |||||| Sbjct: 98401 cgaggagcgcgtcgagcaggcgcgcaaggaggccgag 98365 Score = 101 bits (51), Expect = 5e-18 Identities = 125/148 (84%), Gaps = 5/148 (3%) Strand = Plus / Minus Query: 192 cgccgccgccatgtacaacggcat----cgggctgcagacccagcgggggtccggcacga 247 ||||||||| |||||||||||||| ||| || |||||| ||||||||| ||||||| Sbjct: 98681 cgccgccgcaatgtacaacggcatatatcggtctccagaccgcgcgggggtcgggcacga 98622 Query: 248 atgggcacatccagacgaacaagttcttcgtcaagccctggtcctcggcggtcggcgggc 307 |||||||| | ||||| |||||||||||| ||||||| |||| ||| ||| ||||||| Sbjct: 98621 atgggcacgtgcagaccaacaagttcttcatcaagccgcggtcgtcgtcggcgggcgggc 98562 Query: 308 cccccaagccgccgctccccggccccgg 335 |||| ||| |||||| |||||||||||| Sbjct: 98561 ccccgaaggcgccgc-ccccggccccgg 98535