BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem104g14 (1288 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001055546.1| Oryza sativa (japonica cultivar-group) Os03g... 870 0.0 dbj|AK108804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 870 0.0 gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome... 837 0.0 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 837 0.0 gb|AY108537.1| Zea mays PCO101121 mRNA sequence 155 5e-34 >ref|NM_001055546.1| Oryza sativa (japonica cultivar-group) Os03g0156700 (Os03g0156700) mRNA, complete cds Length = 1294 Score = 870 bits (439), Expect = 0.0 Identities = 757/863 (87%) Strand = Plus / Plus Query: 298 ggcggcggtagttggccctccgtggaagctgcttggaagtctgctcccgaaggcttctac 357 |||||||| ||||| |||||||||||| |||| | ||||||||||| |||||||| | Sbjct: 302 ggcggcggcggttggacctccgtggaagttgctgtggagtctgctccccaaggcttccag 361 Query: 358 tgctgctcgtttcctattgatgacacttattaccagcaccctgcactctagcattcctca 417 ||||||| |||||||||| || | ||| ||||| |||||||||| |||||||||||| | Sbjct: 362 agctgctcttttcctattggtggcgcttgttaccggcaccctgcaatctagcattcctta 421 Query: 418 tcctgcctatgcattcgtgcaaccagtaaccaaaactggtgaactcctcacaacagagtt 477 ||||||| |||||| |||||| || ||||||||||||||| ||| | ||| ||||| | Sbjct: 422 tcctgcccatgcatcagtgcaatcaataaccaaaactggtggactatttacatcagagat 481 Query: 478 actaagcagtggttgggctggtttctttgctggatgcttacatactttatctggccccga 537 ||||||||||||||||||||||||| ||||||||||||| ||||| || ||||| || || Sbjct: 482 actaagcagtggttgggctggtttcattgctggatgcttgcataccttgtctgggcctga 541 Query: 538 ccatctcgttgcattggcaccactgtcgatcggaagatcaagacttgaaagtgggctggt 597 |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 542 ccatctcgttgctttggcaccactgtcgattggaagatcaagactggaaagtggactggt 601 Query: 598 tggtgccctttggggttgtggtcatgatgcaggacaagttattttcggactgctcttctt 657 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 602 cggtgccctttggggttgtggtcatgatgcaggacaagttatttttggcctgctattctt 661 Query: 658 gttactcaaggatcgtttgcacattgaggttctccgtacatggggaacaagagttgtagg 717 |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| || || Sbjct: 662 attactcaaggatcgattgcacattgagattctccggacatggggaacaagagtggttgg 721 Query: 718 tctgacccttcttgtcataggcggtatgggcatccgggaagcttcagaggtccacaaggc 777 |||||||||||| ||||||| |||||||||||||| |||||| ||||||| || | | Sbjct: 722 tctgacccttctaatcataggaggtatgggcatccgagaagctacagaggttcaggaatc 781 Query: 778 atcgctacctttggagggtgtgaactgcaacatgagcggcagtgagcctttgcagacccc 837 ||||| | |||| || ||| |||||||||| | | ||||||||||||| || ||||| Sbjct: 782 gtcgctcgccctggaaggcgtggactgcaacataaccagcagtgagcctttacaaacccc 841 Query: 838 tgctgcttccaggaagaagaaagttggttttgcaacatttgccaccggagttgtccatgg 897 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 842 tgctgctcccaggaagaagaaagttggttttgcaacatttgccactggagttgttcatgg 901 Query: 898 tctccaaccagatgctctgctgatggtcttacccgcattagctcttccttcacgcttagc 957 |||||||||||||||||| |||||||| || || |||| || ||||| |||||||| || Sbjct: 902 tctccaaccagatgctctactgatggtgttgccttcattggcccttccctcacgcttcgc 961 Query: 958 tggtgctgcgtttctcggtatgtttttggtcgggactgtaatttcgatggggagttacac 1017 |||||| || ||||| || ||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 962 tggtgcagcatttcttggcatgtttttgatggggactgtattttcgatggggagttacac 1021 Query: 1018 tgcttttgtaggttcttgtagtgaggctctaaaagaacgggttcctaggataactgagaa 1077 ||||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||| Sbjct: 1022 tgcttttgtaggttcttgtagtgaggccttgaaagaaaaggtccctaggataacagagaa 1081 Query: 1078 actgacatgggctgcttcacttgtagctatatgcatggggatagctcttcttgttgggca 1137 |||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 1082 actgacctgggcggcttcacttgtagcaatatgcatgggaatagctcttctagttgggca 1141 Query: 1138 gttctttgggttcagcctatact 1160 |||||| || ||||||||||||| Sbjct: 1142 gttcttcggtttcagcctatact 1164 >dbj|AK108804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C12, full insert sequence Length = 1295 Score = 870 bits (439), Expect = 0.0 Identities = 757/863 (87%) Strand = Plus / Plus Query: 298 ggcggcggtagttggccctccgtggaagctgcttggaagtctgctcccgaaggcttctac 357 |||||||| ||||| |||||||||||| |||| | ||||||||||| |||||||| | Sbjct: 303 ggcggcggcggttggacctccgtggaagttgctgtggagtctgctccccaaggcttccag 362 Query: 358 tgctgctcgtttcctattgatgacacttattaccagcaccctgcactctagcattcctca 417 ||||||| |||||||||| || | ||| ||||| |||||||||| |||||||||||| | Sbjct: 363 agctgctcttttcctattggtggcgcttgttaccggcaccctgcaatctagcattcctta 422 Query: 418 tcctgcctatgcattcgtgcaaccagtaaccaaaactggtgaactcctcacaacagagtt 477 ||||||| |||||| |||||| || ||||||||||||||| ||| | ||| ||||| | Sbjct: 423 tcctgcccatgcatcagtgcaatcaataaccaaaactggtggactatttacatcagagat 482 Query: 478 actaagcagtggttgggctggtttctttgctggatgcttacatactttatctggccccga 537 ||||||||||||||||||||||||| ||||||||||||| ||||| || ||||| || || Sbjct: 483 actaagcagtggttgggctggtttcattgctggatgcttgcataccttgtctgggcctga 542 Query: 538 ccatctcgttgcattggcaccactgtcgatcggaagatcaagacttgaaagtgggctggt 597 |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 543 ccatctcgttgctttggcaccactgtcgattggaagatcaagactggaaagtggactggt 602 Query: 598 tggtgccctttggggttgtggtcatgatgcaggacaagttattttcggactgctcttctt 657 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 603 cggtgccctttggggttgtggtcatgatgcaggacaagttatttttggcctgctattctt 662 Query: 658 gttactcaaggatcgtttgcacattgaggttctccgtacatggggaacaagagttgtagg 717 |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| || || Sbjct: 663 attactcaaggatcgattgcacattgagattctccggacatggggaacaagagtggttgg 722 Query: 718 tctgacccttcttgtcataggcggtatgggcatccgggaagcttcagaggtccacaaggc 777 |||||||||||| ||||||| |||||||||||||| |||||| ||||||| || | | Sbjct: 723 tctgacccttctaatcataggaggtatgggcatccgagaagctacagaggttcaggaatc 782 Query: 778 atcgctacctttggagggtgtgaactgcaacatgagcggcagtgagcctttgcagacccc 837 ||||| | |||| || ||| |||||||||| | | ||||||||||||| || ||||| Sbjct: 783 gtcgctcgccctggaaggcgtggactgcaacataaccagcagtgagcctttacaaacccc 842 Query: 838 tgctgcttccaggaagaagaaagttggttttgcaacatttgccaccggagttgtccatgg 897 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 843 tgctgctcccaggaagaagaaagttggttttgcaacatttgccactggagttgttcatgg 902 Query: 898 tctccaaccagatgctctgctgatggtcttacccgcattagctcttccttcacgcttagc 957 |||||||||||||||||| |||||||| || || |||| || ||||| |||||||| || Sbjct: 903 tctccaaccagatgctctactgatggtgttgccttcattggcccttccctcacgcttcgc 962 Query: 958 tggtgctgcgtttctcggtatgtttttggtcgggactgtaatttcgatggggagttacac 1017 |||||| || ||||| || ||||||||| | ||||||||| ||||||||||||||||||| Sbjct: 963 tggtgcagcatttcttggcatgtttttgatggggactgtattttcgatggggagttacac 1022 Query: 1018 tgcttttgtaggttcttgtagtgaggctctaaaagaacgggttcctaggataactgagaa 1077 ||||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||| Sbjct: 1023 tgcttttgtaggttcttgtagtgaggccttgaaagaaaaggtccctaggataacagagaa 1082 Query: 1078 actgacatgggctgcttcacttgtagctatatgcatggggatagctcttcttgttgggca 1137 |||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 1083 actgacctgggcggcttcacttgtagcaatatgcatgggaatagctcttctagttgggca 1142 Query: 1138 gttctttgggttcagcctatact 1160 |||||| || ||||||||||||| Sbjct: 1143 gttcttcggtttcagcctatact 1165 >gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 837 bits (422), Expect = 0.0 Identities = 707/802 (88%) Strand = Plus / Plus Query: 359 gctgctcgtttcctattgatgacacttattaccagcaccctgcactctagcattcctcat 418 ||||||| |||||||||| || | ||| ||||| |||||||||| |||||||||||| || Sbjct: 65037 gctgctcttttcctattggtggcgcttgttaccggcaccctgcaatctagcattccttat 65096 Query: 419 cctgcctatgcattcgtgcaaccagtaaccaaaactggtgaactcctcacaacagagtta 478 |||||| |||||| |||||| || ||||||||||||||| ||| | ||| ||||| || Sbjct: 65097 cctgcccatgcatcagtgcaatcaataaccaaaactggtggactatttacatcagagata 65156 Query: 479 ctaagcagtggttgggctggtttctttgctggatgcttacatactttatctggccccgac 538 |||||||||||||||||||||||| ||||||||||||| ||||| || ||||| || ||| Sbjct: 65157 ctaagcagtggttgggctggtttcattgctggatgcttgcataccttgtctgggcctgac 65216 Query: 539 catctcgttgcattggcaccactgtcgatcggaagatcaagacttgaaagtgggctggtt 598 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 65217 catctcgttgctttggcaccactgtcgattggaagatcaagactggaaagtggactggtc 65276 Query: 599 ggtgccctttggggttgtggtcatgatgcaggacaagttattttcggactgctcttcttg 658 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 65277 ggtgccctttggggttgtggtcatgatgcaggacaagttatttttggcctgctattctta 65336 Query: 659 ttactcaaggatcgtttgcacattgaggttctccgtacatggggaacaagagttgtaggt 718 |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| || ||| Sbjct: 65337 ttactcaaggatcgattgcacattgagattctccggacatggggaacaagagtggttggt 65396 Query: 719 ctgacccttcttgtcataggcggtatgggcatccgggaagcttcagaggtccacaaggca 778 ||||||||||| ||||||| |||||||||||||| |||||| ||||||| || | | Sbjct: 65397 ctgacccttctaatcataggaggtatgggcatccgagaagctacagaggttcaggaatcg 65456 Query: 779 tcgctacctttggagggtgtgaactgcaacatgagcggcagtgagcctttgcagacccct 838 ||||| | |||| || ||| |||||||||| | | ||||||||||||| || |||||| Sbjct: 65457 tcgctcgccctggaaggcgtggactgcaacataaccagcagtgagcctttacaaacccct 65516 Query: 839 gctgcttccaggaagaagaaagttggttttgcaacatttgccaccggagttgtccatggt 898 |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 65517 gctgctcccaggaagaagaaagttggttttgcaacatttgccactggagttgttcatggt 65576 Query: 899 ctccaaccagatgctctgctgatggtcttacccgcattagctcttccttcacgcttagct 958 ||||||||||||||||| |||||||| || || |||| || ||||| |||||||| ||| Sbjct: 65577 ctccaaccagatgctctactgatggtgttgccttcattggcccttccctcacgcttcgct 65636 Query: 959 ggtgctgcgtttctcggtatgtttttggtcgggactgtaatttcgatggggagttacact 1018 ||||| || ||||| || ||||||||| | ||||||||| |||||||||||||||||||| Sbjct: 65637 ggtgcagcatttcttggcatgtttttgatggggactgtattttcgatggggagttacact 65696 Query: 1019 gcttttgtaggttcttgtagtgaggctctaaaagaacgggttcctaggataactgagaaa 1078 |||||||||||||||||||||||||| | |||||| ||| ||||||||||| |||||| Sbjct: 65697 gcttttgtaggttcttgtagtgaggccttgaaagaaaaggtccctaggataacagagaaa 65756 Query: 1079 ctgacatgggctgcttcacttgtagctatatgcatggggatagctcttcttgttgggcag 1138 ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 65757 ctgacctgggcggcttcacttgtagcaatatgcatgggaatagctcttctagttgggcag 65816 Query: 1139 ttctttgggttcagcctatact 1160 ||||| || ||||||||||||| Sbjct: 65817 ttcttcggtttcagcctatact 65838 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 837 bits (422), Expect = 0.0 Identities = 707/802 (88%) Strand = Plus / Minus Query: 359 gctgctcgtttcctattgatgacacttattaccagcaccctgcactctagcattcctcat 418 ||||||| |||||||||| || | ||| ||||| |||||||||| |||||||||||| || Sbjct: 3031335 gctgctcttttcctattggtggcgcttgttaccggcaccctgcaatctagcattccttat 3031276 Query: 419 cctgcctatgcattcgtgcaaccagtaaccaaaactggtgaactcctcacaacagagtta 478 |||||| |||||| |||||| || ||||||||||||||| ||| | ||| ||||| || Sbjct: 3031275 cctgcccatgcatcagtgcaatcaataaccaaaactggtggactatttacatcagagata 3031216 Query: 479 ctaagcagtggttgggctggtttctttgctggatgcttacatactttatctggccccgac 538 |||||||||||||||||||||||| ||||||||||||| ||||| || ||||| || ||| Sbjct: 3031215 ctaagcagtggttgggctggtttcattgctggatgcttgcataccttgtctgggcctgac 3031156 Query: 539 catctcgttgcattggcaccactgtcgatcggaagatcaagacttgaaagtgggctggtt 598 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 3031155 catctcgttgctttggcaccactgtcgattggaagatcaagactggaaagtggactggtc 3031096 Query: 599 ggtgccctttggggttgtggtcatgatgcaggacaagttattttcggactgctcttcttg 658 |||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct: 3031095 ggtgccctttggggttgtggtcatgatgcaggacaagttatttttggcctgctattctta 3031036 Query: 659 ttactcaaggatcgtttgcacattgaggttctccgtacatggggaacaagagttgtaggt 718 |||||||||||||| |||||||||||| ||||||| ||||||||||||||||| || ||| Sbjct: 3031035 ttactcaaggatcgattgcacattgagattctccggacatggggaacaagagtggttggt 3030976 Query: 719 ctgacccttcttgtcataggcggtatgggcatccgggaagcttcagaggtccacaaggca 778 ||||||||||| ||||||| |||||||||||||| |||||| ||||||| || | | Sbjct: 3030975 ctgacccttctaatcataggaggtatgggcatccgagaagctacagaggttcaggaatcg 3030916 Query: 779 tcgctacctttggagggtgtgaactgcaacatgagcggcagtgagcctttgcagacccct 838 ||||| | |||| || ||| |||||||||| | | ||||||||||||| || |||||| Sbjct: 3030915 tcgctcgccctggaaggcgtggactgcaacataaccagcagtgagcctttacaaacccct 3030856 Query: 839 gctgcttccaggaagaagaaagttggttttgcaacatttgccaccggagttgtccatggt 898 |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 3030855 gctgctcccaggaagaagaaagttggttttgcaacatttgccactggagttgttcatggt 3030796 Query: 899 ctccaaccagatgctctgctgatggtcttacccgcattagctcttccttcacgcttagct 958 ||||||||||||||||| |||||||| || || |||| || ||||| |||||||| ||| Sbjct: 3030795 ctccaaccagatgctctactgatggtgttgccttcattggcccttccctcacgcttcgct 3030736 Query: 959 ggtgctgcgtttctcggtatgtttttggtcgggactgtaatttcgatggggagttacact 1018 ||||| || ||||| || ||||||||| | ||||||||| |||||||||||||||||||| Sbjct: 3030735 ggtgcagcatttcttggcatgtttttgatggggactgtattttcgatggggagttacact 3030676 Query: 1019 gcttttgtaggttcttgtagtgaggctctaaaagaacgggttcctaggataactgagaaa 1078 |||||||||||||||||||||||||| | |||||| ||| ||||||||||| |||||| Sbjct: 3030675 gcttttgtaggttcttgtagtgaggccttgaaagaaaaggtccctaggataacagagaaa 3030616 Query: 1079 ctgacatgggctgcttcacttgtagctatatgcatggggatagctcttcttgttgggcag 1138 ||||| ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 3030615 ctgacctgggcggcttcacttgtagcaatatgcatgggaatagctcttctagttgggcag 3030556 Query: 1139 ttctttgggttcagcctatact 1160 ||||| || ||||||||||||| Sbjct: 3030555 ttcttcggtttcagcctatact 3030534 >gb|AY108537.1| Zea mays PCO101121 mRNA sequence Length = 784 Score = 155 bits (78), Expect = 5e-34 Identities = 288/358 (80%) Strand = Plus / Plus Query: 808 catgagcggcagtgagcctttgcagacccctgctgcttccaggaagaagaaagttggttt 867 ||||||| ||| |||||| ||||| || || | ||| || ||||||||||||| ||||| Sbjct: 179 catgagcagcaacgagcctctgcagcccgcttcagctccccggaagaagaaagtcggttt 238 Query: 868 tgcaacatttgccaccggagttgtccatggtctccaaccagatgctctgctgatggtctt 927 ||||| || ||||| || | |||||||| ||||| || || || |||||||||||| | Sbjct: 239 cgcaacgttcgccacggggatcgtccatgggctccagccggacgccctgctgatggtcct 298 Query: 928 acccgcattagctcttccttcacgcttagctggtgctgcgtttctcggtatgtttttggt 987 || || | ||||| || || ||||| || || || || || ||||| ||||| |||| Sbjct: 299 gccagcgctggctctcccgtcgcgcttcgccggcgcggccttcctcggcatgttcctggt 358 Query: 988 cgggactgtaatttcgatggggagttacactgcttttgtaggttcttgtagtgaggctct 1047 ||| || || | ||||||||||| |||||||| ||||| || || ||||| ||||| || Sbjct: 359 cggcaccgtgttctcgatggggagctacactgcctttgtgggctcctgtagcgaggccct 418 Query: 1048 aaaagaacgggttcctaggataactgagaaactgacatgggctgcttcacttgtagctat 1107 ||||| ||||||||||||||| ||||||||||| |||||||| || || |||||||| Sbjct: 419 gaaagagaaggttcctaggataacagagaaactgacctgggctgcctcgctcgtagctat 478 Query: 1108 atgcatggggatagctcttcttgttgggcagttctttgggttcagcctatactgatgc 1165 | |||||| |||| || || |||||||||||||||||||||||||| ||||||||| Sbjct: 479 agccatgggtgtagccctcctggttgggcagttctttgggttcagcctgtactgatgc 536 Score = 127 bits (64), Expect = 1e-25 Identities = 115/132 (87%) Strand = Plus / Plus Query: 640 tttcggactgctcttcttgttactcaaggatcgtttgcacattgaggttctccgtacatg 699 |||||| |||||||||||| |||||||||| || |||||||| ||||| ||||| |||| Sbjct: 8 tttcggcctgctcttcttgctactcaaggaccggttgcacatcgaggtgttccgtgcatg 67 Query: 700 gggaacaagagttgtaggtctgacccttcttgtcataggcggtatgggcatccgggaagc 759 |||||||||||||||||| ||||||||||| ||||||| | ||||| |||||||||| Sbjct: 68 gggaacaagagttgtaggcctgacccttctgatcataggagccatgggtgtccgggaagc 127 Query: 760 ttcagaggtcca 771 ||| |||||||| Sbjct: 128 ttcggaggtcca 139