BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem104f08 (926 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058576.1| Oryza sativa (japonica cultivar-group) Os04g... 418 e-113 dbj|AK070523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 418 e-113 emb|CR855036.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 234 5e-58 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 234 5e-58 emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4,... 234 5e-58 >ref|NM_001058576.1| Oryza sativa (japonica cultivar-group) Os04g0115400 (Os04g0115400) mRNA, complete cds Length = 1467 Score = 418 bits (211), Expect = e-113 Identities = 286/311 (91%) Strand = Plus / Plus Query: 244 gagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggctagag 303 |||||||||||||| ||||| ||||| || ||||||||||| || || ||||||| ||| Sbjct: 203 gagttccggctgcccatgagccaccgccccacggagaacctcgagacggaggggctggag 262 Query: 304 caggcctccgtcgacacgcagctcacctcctccaacgtcggcttcaggctgctccagaag 363 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 263 caggcgtccgttgacacgcagctcacctcctccaacgtcggattcaggctgctccagaag 322 Query: 364 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataatagagccaataaaa 423 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 323 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataacagagccaataaaa 382 Query: 424 gctggcatcagagatgcaaaattaggtgtggggaagcaagagcaagatgacttcttcaca 483 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 383 gctggtatcagagatgcaaaattgggtgtggggaagcaagagcaagatgacttcttcaca 442 Query: 484 tccgaagagaatgtacaaagaaagaaattaaatgttgaacttgaggagactgaagaacat 543 || ||||| ||||| ||||| | ||||||||| | || ||||||||||||||||||||| Sbjct: 443 tcagaagataatgtgcaaaggaggaaattaaacatagagcttgaggagactgaagaacat 502 Query: 544 agaaagaagcg 554 | ||||||||| Sbjct: 503 ataaagaagcg 513 Score = 236 bits (119), Expect = 1e-58 Identities = 196/221 (88%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 557 agaacgcgagcataaaatccgcagcgaggtcaaggagatacagaaggtgttcttttgcag 616 |||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 664 agaacgcgagcagaaaatacgtagtgaggtcaaggagatacagaaggtgttcttttgcag 723 Query: 617 cctctgtaataagcaatacaagctggcgcatgaatttgagtatcatttgagctcatatga 676 |||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 724 tctctgtaacaagcagtacaaattggcgcatgaatttgagtctcatttgagctcatacga 783 Query: 677 ccataatcataggaagagatttaaggaaatgagagaaatgcaaagcagcagcagtgtt-- 734 ||| |||||||||||||| || |||||||||| ||||||||||||||||||||| Sbjct: 784 ccacaatcataggaagaggttcaaggaaatgaaagaaatgcaaagcagcagcagcagcag 843 Query: 735 -cgtgatggcaggcagaaacgtgagcaacaaagagaagaga 774 ||||||| |||||||||||||||||| ||| ||||||||| Sbjct: 844 ccgtgatgacaggcagaaacgtgagcagcaacgagaagaga 884 >dbj|AK070523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055J24, full insert sequence Length = 1547 Score = 418 bits (211), Expect = e-113 Identities = 286/311 (91%) Strand = Plus / Plus Query: 244 gagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggctagag 303 |||||||||||||| ||||| ||||| || ||||||||||| || || ||||||| ||| Sbjct: 204 gagttccggctgcccatgagccaccgccccacggagaacctcgagacggaggggctggag 263 Query: 304 caggcctccgtcgacacgcagctcacctcctccaacgtcggcttcaggctgctccagaag 363 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 264 caggcgtccgttgacacgcagctcacctcctccaacgtcggattcaggctgctccagaag 323 Query: 364 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataatagagccaataaaa 423 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 324 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataacagagccaataaaa 383 Query: 424 gctggcatcagagatgcaaaattaggtgtggggaagcaagagcaagatgacttcttcaca 483 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 384 gctggtatcagagatgcaaaattgggtgtggggaagcaagagcaagatgacttcttcaca 443 Query: 484 tccgaagagaatgtacaaagaaagaaattaaatgttgaacttgaggagactgaagaacat 543 || ||||| ||||| ||||| | ||||||||| | || ||||||||||||||||||||| Sbjct: 444 tcagaagataatgtgcaaaggaggaaattaaacatagagcttgaggagactgaagaacat 503 Query: 544 agaaagaagcg 554 | ||||||||| Sbjct: 504 ataaagaagcg 514 Score = 236 bits (119), Expect = 1e-58 Identities = 196/221 (88%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 557 agaacgcgagcataaaatccgcagcgaggtcaaggagatacagaaggtgttcttttgcag 616 |||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 742 agaacgcgagcagaaaatacgtagtgaggtcaaggagatacagaaggtgttcttttgcag 801 Query: 617 cctctgtaataagcaatacaagctggcgcatgaatttgagtatcatttgagctcatatga 676 |||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 802 tctctgtaacaagcagtacaaattggcgcatgaatttgagtctcatttgagctcatacga 861 Query: 677 ccataatcataggaagagatttaaggaaatgagagaaatgcaaagcagcagcagtgtt-- 734 ||| |||||||||||||| || |||||||||| ||||||||||||||||||||| Sbjct: 862 ccacaatcataggaagaggttcaaggaaatgaaagaaatgcaaagcagcagcagcagcag 921 Query: 735 -cgtgatggcaggcagaaacgtgagcaacaaagagaagaga 774 ||||||| |||||||||||||||||| ||| ||||||||| Sbjct: 922 ccgtgatgacaggcagaaacgtgagcagcaacgagaagaga 962 >emb|CR855036.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0112G01, complete sequence Length = 86318 Score = 234 bits (118), Expect = 5e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 244 gagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggctagag 303 |||||||||||||| ||||| ||||| || ||||||||||| || || ||||||| ||| Sbjct: 62250 gagttccggctgcccatgagccaccgccccacggagaacctcgagacggaggggctggag 62309 Query: 304 caggcctccgtcgacacgcagctcacctcctccaacgtcggcttcaggctgctccagaag 363 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 62310 caggcgtccgttgacacgcagctcacctcctccaacgtcggattcaggctgctccagaag 62369 Query: 364 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 409 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62370 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 62415 Score = 200 bits (101), Expect = 7e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 402 aggtataatagagccaataaaagctggcatcagagatgcaaaattaggtgtggggaagca 461 |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 63512 aggtataacagagccaataaaagctggtatcagagatgcaaaattgggtgtggggaagca 63571 Query: 462 agagcaagatgacttcttcacatccgaagagaatgtacaaagaaagaaattaaatgttga 521 |||||||||||||||||||||||| ||||| ||||| ||||| | ||||||||| | || Sbjct: 63572 agagcaagatgacttcttcacatcagaagataatgtgcaaaggaggaaattaaacataga 63631 Query: 522 acttgaggagactgaagaacatagaaagaagcg 554 |||||||||||||||||||||| ||||||||| Sbjct: 63632 gcttgaggagactgaagaacatataaagaagcg 63664 Score = 174 bits (88), Expect = 4e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 557 agaacgcgagcataaaatccgcagcgaggtcaaggagatacagaaggtgttcttttgcag 616 |||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 63892 agaacgcgagcagaaaatacgtagtgaggtcaaggagatacagaaggtgttcttttgcag 63951 Query: 617 cctctgtaataagcaatacaagctggcgcatgaatttgagtatcatttgagctcatatga 676 |||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 63952 tctctgtaacaagcagtacaaattggcgcatgaatttgagtctcatttgagctcatacga 64011 Query: 677 ccataatcataggaag 692 ||| |||||||||||| Sbjct: 64012 ccacaatcataggaag 64027 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 234 bits (118), Expect = 5e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 244 gagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggctagag 303 |||||||||||||| ||||| ||||| || ||||||||||| || || ||||||| ||| Sbjct: 897191 gagttccggctgcccatgagccaccgccccacggagaacctcgagacggaggggctggag 897250 Query: 304 caggcctccgtcgacacgcagctcacctcctccaacgtcggcttcaggctgctccagaag 363 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 897251 caggcgtccgttgacacgcagctcacctcctccaacgtcggattcaggctgctccagaag 897310 Query: 364 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 409 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897311 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 897356 Score = 200 bits (101), Expect = 7e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 402 aggtataatagagccaataaaagctggcatcagagatgcaaaattaggtgtggggaagca 461 |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 898452 aggtataacagagccaataaaagctggtatcagagatgcaaaattgggtgtggggaagca 898511 Query: 462 agagcaagatgacttcttcacatccgaagagaatgtacaaagaaagaaattaaatgttga 521 |||||||||||||||||||||||| ||||| ||||| ||||| | ||||||||| | || Sbjct: 898512 agagcaagatgacttcttcacatcagaagataatgtgcaaaggaggaaattaaacataga 898571 Query: 522 acttgaggagactgaagaacatagaaagaagcg 554 |||||||||||||||||||||| ||||||||| Sbjct: 898572 gcttgaggagactgaagaacatataaagaagcg 898604 Score = 174 bits (88), Expect = 4e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 557 agaacgcgagcataaaatccgcagcgaggtcaaggagatacagaaggtgttcttttgcag 616 |||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 898832 agaacgcgagcagaaaatacgtagtgaggtcaaggagatacagaaggtgttcttttgcag 898891 Query: 617 cctctgtaataagcaatacaagctggcgcatgaatttgagtatcatttgagctcatatga 676 |||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 898892 tctctgtaacaagcagtacaaattggcgcatgaatttgagtctcatttgagctcatacga 898951 Query: 677 ccataatcataggaag 692 ||| |||||||||||| Sbjct: 898952 ccacaatcataggaag 898967 Score = 155 bits (78), Expect = 4e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 241 gaggagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggcta 300 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| ||| Sbjct: 876576 gaggagttccggctgccgatgagccaccgtccgacggagaacctcgacacggaggtgctg 876635 Query: 301 gagcaggcctccgtcgacacgcagctcacctcctccaacgtcggct 346 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876636 gagcaggcctccgtcgacacgcagctcacctcctccaacgtcggct 876681 >emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 234 bits (118), Expect = 5e-58 Identities = 154/166 (92%) Strand = Plus / Plus Query: 244 gagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggctagag 303 |||||||||||||| ||||| ||||| || ||||||||||| || || ||||||| ||| Sbjct: 117852 gagttccggctgcccatgagccaccgccccacggagaacctcgagacggaggggctggag 117911 Query: 304 caggcctccgtcgacacgcagctcacctcctccaacgtcggcttcaggctgctccagaag 363 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 117912 caggcgtccgttgacacgcagctcacctcctccaacgtcggattcaggctgctccagaag 117971 Query: 364 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 409 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117972 atggggtggaagggcaaggggctcggcaagaacgagcaaggtataa 118017 Score = 200 bits (101), Expect = 7e-48 Identities = 140/153 (91%) Strand = Plus / Plus Query: 402 aggtataatagagccaataaaagctggcatcagagatgcaaaattaggtgtggggaagca 461 |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 119113 aggtataacagagccaataaaagctggtatcagagatgcaaaattgggtgtggggaagca 119172 Query: 462 agagcaagatgacttcttcacatccgaagagaatgtacaaagaaagaaattaaatgttga 521 |||||||||||||||||||||||| ||||| ||||| ||||| | ||||||||| | || Sbjct: 119173 agagcaagatgacttcttcacatcagaagataatgtgcaaaggaggaaattaaacataga 119232 Query: 522 acttgaggagactgaagaacatagaaagaagcg 554 |||||||||||||||||||||| ||||||||| Sbjct: 119233 gcttgaggagactgaagaacatataaagaagcg 119265 Score = 174 bits (88), Expect = 4e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 557 agaacgcgagcataaaatccgcagcgaggtcaaggagatacagaaggtgttcttttgcag 616 |||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 119493 agaacgcgagcagaaaatacgtagtgaggtcaaggagatacagaaggtgttcttttgcag 119552 Query: 617 cctctgtaataagcaatacaagctggcgcatgaatttgagtatcatttgagctcatatga 676 |||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||| || Sbjct: 119553 tctctgtaacaagcagtacaaattggcgcatgaatttgagtctcatttgagctcatacga 119612 Query: 677 ccataatcataggaag 692 ||| |||||||||||| Sbjct: 119613 ccacaatcataggaag 119628 Score = 155 bits (78), Expect = 4e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 241 gaggagttccggctgccgatgaggcaccggccgacggagaacctggacacataggggcta 300 ||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| ||| Sbjct: 97237 gaggagttccggctgccgatgagccaccgtccgacggagaacctcgacacggaggtgctg 97296 Query: 301 gagcaggcctccgtcgacacgcagctcacctcctccaacgtcggct 346 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97297 gagcaggcctccgtcgacacgcagctcacctcctccaacgtcggct 97342